RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 FOXD4L3Q6VB84 417 aaPredicted RBP9.92□□□□□ -0.82
NEMF-209ENST00000556074 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
NEMF-209ENST00000556074 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
NEMF-209ENST00000556074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
NEMF-209ENST00000556074 C8orf37Q96NL8 207 aa9.91□□□□□ -0.82
NEMF-209ENST00000556074 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
NEMF-209ENST00000556074 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
NEMF-209ENST00000556074 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
NEMF-209ENST00000556074 GRIPAP1Q4V328 841 aa9.9□□□□□ -0.82
NEMF-209ENST00000556074 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
NEMF-209ENST00000556074 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.83
NEMF-209ENST00000556074 UBXN4Q92575 508 aa9.89□□□□□ -0.83
NEMF-209ENST00000556074 APBB1IPQ7Z5R6 666 aaPredicted RBP9.88□□□□□ -0.83
NEMF-209ENST00000556074 U3KPZ7 1027 aaPredicted RBP9.88□□□□□ -0.83
NEMF-209ENST00000556074 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
NEMF-209ENST00000556074 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
NEMF-209ENST00000556074 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
NEMF-209ENST00000556074 FAM9BQ8IZU0 186 aa9.86□□□□□ -0.83
NEMF-209ENST00000556074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.838e-7■■■■□ 24.6
NEMF-209ENST00000556074 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
NEMF-209ENST00000556074 ZNF16P17020 682 aaPredicted RBP9.85□□□□□ -0.83
NEMF-209ENST00000556074 MCCP23508 829 aa9.85□□□□□ -0.83
NEMF-209ENST00000556074 CDCA7Q9BWT1 371 aaPredicted RBP9.85□□□□□ -0.83
NEMF-209ENST00000556074 PEX14O75381 377 aa9.84□□□□□ -0.83
NEMF-209ENST00000556074 TERF2IPQ9NYB0 399 aa9.84□□□□□ -0.83
NEMF-209ENST00000556074 MAP4K4O95819 1239 aaPredicted RBP9.84□□□□□ -0.83
NEMF-209ENST00000556074 GPATCH3Q96I76 525 aa9.84□□□□□ -0.83
NEMF-209ENST00000556074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.83□□□□□ -0.84
NEMF-209ENST00000556074 TBC1D12O60347 775 aa9.83□□□□□ -0.84
NEMF-209ENST00000556074 CHRM1P11229 460 aaPredicted RBP9.83□□□□□ -0.84
NEMF-209ENST00000556074 KLHL42Q9P2K6 505 aa9.83□□□□□ -0.84
NEMF-209ENST00000556074 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
NEMF-209ENST00000556074 NME8Q8N427 588 aa9.82□□□□□ -0.84
NEMF-209ENST00000556074 RBM10P98175 930 aaKnown RBP9.82□□□□□ -0.84
NEMF-209ENST00000556074 VTI1AQ96AJ9 217 aa9.82□□□□□ -0.84
NEMF-209ENST00000556074 RBM46Q8TBY0 533 aaKnown RBP9.82□□□□□ -0.84
NEMF-209ENST00000556074 GSE1Q14687 1217 aa9.81□□□□□ -0.84
NEMF-209ENST00000556074 RALBP1Q15311 655 aa9.81□□□□□ -0.84
NEMF-209ENST00000556074 OS9Q13438 667 aaPredicted RBP9.81□□□□□ -0.84
NEMF-209ENST00000556074 DMRT2Q9Y5R5 561 aa9.81□□□□□ -0.84
NEMF-209ENST00000556074 NOM1Q5C9Z4 860 aaKnown RBP9.8□□□□□ -0.84
NEMF-209ENST00000556074 PBXIP1Q96AQ6 731 aa9.8□□□□□ -0.84
NEMF-209ENST00000556074 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
NEMF-209ENST00000556074 DNAJC14Q6Y2X3 702 aaPredicted RBP9.8□□□□□ -0.84
NEMF-209ENST00000556074 SGIP1Q9BQI5 828 aa9.8□□□□□ -0.84
NEMF-209ENST00000556074 DPH6Q7L8W6 267 aa9.8□□□□□ -0.84
NEMF-209ENST00000556074 NAALADL2Q58DX5 795 aa9.79□□□□□ -0.84
NEMF-209ENST00000556074 POTEDQ86YR6 584 aa9.79□□□□□ -0.84
NEMF-209ENST00000556074 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
NEMF-209ENST00000556074 PABPN1Q86U42 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
NEMF-209ENST00000556074 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
NEMF-209ENST00000556074 AMHR2Q16671 573 aa9.78□□□□□ -0.84
NEMF-209ENST00000556074 GPR37O15354 613 aa9.78□□□□□ -0.84
NEMF-209ENST00000556074 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
NEMF-209ENST00000556074 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.84
NEMF-209ENST00000556074 CCDC102AQ96A19 550 aa9.77□□□□□ -0.84
NEMF-209ENST00000556074 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.84
NEMF-209ENST00000556074 KCNG1Q9UIX4 513 aa9.77□□□□□ -0.85
NEMF-209ENST00000556074 MORC4Q8TE76 937 aa9.77□□□□□ -0.85
NEMF-209ENST00000556074 SBNO2Q9Y2G9 1366 aa9.76□□□□□ -0.85
NEMF-209ENST00000556074 PPFIA4O75335 1185 aa9.76□□□□□ -0.85
NEMF-209ENST00000556074 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
NEMF-209ENST00000556074 PARNO95453 639 aaKnown RBP9.75□□□□□ -0.85
NEMF-209ENST00000556074 RFX1P22670 979 aa9.75□□□□□ -0.85
NEMF-209ENST00000556074 GLMNQ92990 594 aa9.75□□□□□ -0.85
NEMF-209ENST00000556074 SECISBP2LQ93073 1101 aaKnown RBP9.75□□□□□ -0.85
NEMF-209ENST00000556074 MS4A1P11836 297 aa9.74□□□□□ -0.85
NEMF-209ENST00000556074 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
NEMF-209ENST00000556074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.857e-9■■□□□ 13
NEMF-209ENST00000556074 FOXD4Q12950 439 aaPredicted RBP9.72□□□□□ -0.85
NEMF-209ENST00000556074 SF3A1Q15459 793 aaKnown RBP9.72□□□□□ -0.85
NEMF-209ENST00000556074 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 GIPC2Q8TF65 315 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
NEMF-209ENST00000556074 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.86
NEMF-209ENST00000556074 GNEQ9Y223 722 aaKnown RBP9.7□□□□□ -0.86
NEMF-209ENST00000556074 RPS6KL1Q9Y6S9 549 aa9.7□□□□□ -0.86
NEMF-209ENST00000556074 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
NEMF-209ENST00000556074 SPDYE2BA6NHP3 402 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 SPDYE5A6NIY4 337 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 SPDYE6P0CI01 402 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 NUBP1P53384 320 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 PMM1Q92871 262 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 SMC5Q8IY18 1101 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 CCDC194A0A1B0GVG4 234 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
NEMF-209ENST00000556074 CREB3O43889 395 aa9.68□□□□□ -0.86
NEMF-209ENST00000556074 PSME1Q06323 249 aa9.68□□□□□ -0.86
NEMF-209ENST00000556074 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
NEMF-209ENST00000556074 MINK1Q8N4C8 1332 aaPredicted RBP9.68□□□□□ -0.86
NEMF-209ENST00000556074 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
NEMF-209ENST00000556074 CCDC181Q5TID7 509 aa9.67□□□□□ -0.86
NEMF-209ENST00000556074 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
NEMF-209ENST00000556074 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms