RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PLCH2O75038 1416 aa22.42■■□□□ 1.18
PCNX1-209ENST00000554879 FANCAO15360 1455 aa22.4■■□□□ 1.18
PCNX1-209ENST00000554879 ADGRL1O94910 1474 aa22.39■■□□□ 1.17
PCNX1-209ENST00000554879 USP47Q96K76 1375 aa22.38■■□□□ 1.17
PCNX1-209ENST00000554879 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
PCNX1-209ENST00000554879 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
PCNX1-209ENST00000554879 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
PCNX1-209ENST00000554879 SAFB2Q14151 953 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCNX1-209ENST00000554879 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
PCNX1-209ENST00000554879 WASHC2AQ641Q2 1341 aa22.33■■□□□ 1.17
PCNX1-209ENST00000554879 CC2D1BQ5T0F9 858 aaKnown RBP22.33■■□□□ 1.16
PCNX1-209ENST00000554879 TMF1P82094 1093 aa22.32■■□□□ 1.16
PCNX1-209ENST00000554879 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
PCNX1-209ENST00000554879 STK26Q9P289 416 aa22.31■■□□□ 1.16
PCNX1-209ENST00000554879 KDM6BO15054 1643 aa22.3■■□□□ 1.16
PCNX1-209ENST00000554879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.28■■□□□ 1.16
PCNX1-209ENST00000554879 KIF7Q2M1P5 1343 aa22.27■■□□□ 1.16
PCNX1-209ENST00000554879 RPRD2Q5VT52 1461 aaKnown RBP22.26■■□□□ 1.15
PCNX1-209ENST00000554879 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
PCNX1-209ENST00000554879 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
PCNX1-209ENST00000554879 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
PCNX1-209ENST00000554879 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
PCNX1-209ENST00000554879 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
PCNX1-209ENST00000554879 C11orf95C9JLR9 678 aaPredicted RBP22.22■■□□□ 1.15
PCNX1-209ENST00000554879 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
PCNX1-209ENST00000554879 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
PCNX1-209ENST00000554879 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
PCNX1-209ENST00000554879 POGKQ9P215 609 aa22.21■■□□□ 1.15
PCNX1-209ENST00000554879 PZPP20742 1482 aa22.21■■□□□ 1.15
PCNX1-209ENST00000554879 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
PCNX1-209ENST00000554879 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
PCNX1-209ENST00000554879 TNNT2P45379 298 aaPredicted RBP22.18■■□□□ 1.14
PCNX1-209ENST00000554879 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
PCNX1-209ENST00000554879 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
PCNX1-209ENST00000554879 UHRF1BP1LA0JNW5 1464 aa22.16■■□□□ 1.14
PCNX1-209ENST00000554879 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
PCNX1-209ENST00000554879 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
PCNX1-209ENST00000554879 PRKRIP1Q9H875 184 aaPredicted RBP22.15■■□□□ 1.14
PCNX1-209ENST00000554879 SAMD9LQ8IVG5 1584 aa22.15■■□□□ 1.14
PCNX1-209ENST00000554879 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.13
PCNX1-209ENST00000554879 TMEM132EQ6IEE7 984 aa22.13■■□□□ 1.13
PCNX1-209ENST00000554879 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
PCNX1-209ENST00000554879 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
PCNX1-209ENST00000554879 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
PCNX1-209ENST00000554879 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
PCNX1-209ENST00000554879 PANK3Q9H999 370 aa22.11■■□□□ 1.13
PCNX1-209ENST00000554879 DENND4BO75064 1496 aaPredicted RBP22.1■■□□□ 1.13
PCNX1-209ENST00000554879 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
PCNX1-209ENST00000554879 SRPK2P78362 688 aaKnown RBP22.1■■□□□ 1.13
PCNX1-209ENST00000554879 MYO5CQ9NQX4 1742 aa22.08■■□□□ 1.13
PCNX1-209ENST00000554879 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
PCNX1-209ENST00000554879 ARHGEF12Q9NZN5 1544 aa22.07■■□□□ 1.12
PCNX1-209ENST00000554879 ERBINQ96RT1 1412 aa22.05■■□□□ 1.12
PCNX1-209ENST00000554879 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
PCNX1-209ENST00000554879 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
PCNX1-209ENST00000554879 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
PCNX1-209ENST00000554879 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
PCNX1-209ENST00000554879 ZNF518AQ6AHZ1 1483 aa22.04■■□□□ 1.12
PCNX1-209ENST00000554879 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
PCNX1-209ENST00000554879 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
PCNX1-209ENST00000554879 ARHGEF5Q12774 1597 aa22.02■■□□□ 1.12
PCNX1-209ENST00000554879 FBXO31Q5XUX0 539 aaPredicted RBP22.02■■□□□ 1.12
PCNX1-209ENST00000554879 ADGBQ8N7X0 1667 aa22.01■■□□□ 1.11
PCNX1-209ENST00000554879 A2MP01023 1474 aa22.01■■□□□ 1.11
PCNX1-209ENST00000554879 CCDC184Q52MB2 194 aa22■■□□□ 1.11
PCNX1-209ENST00000554879 ADGRF5Q8IZF2 1346 aa21.98■■□□□ 1.11
PCNX1-209ENST00000554879 RTEL1-TNFRSF6BF6WH68 1400 aa21.98■■□□□ 1.11
PCNX1-209ENST00000554879 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
PCNX1-209ENST00000554879 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
PCNX1-209ENST00000554879 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
PCNX1-209ENST00000554879 PLEKHG5O94827 1062 aa21.96■■□□□ 1.11
PCNX1-209ENST00000554879 RALBP1Q15311 655 aa21.96■■□□□ 1.11
PCNX1-209ENST00000554879 CDC42BPBQ9Y5S2 1711 aa21.96■■□□□ 1.11
PCNX1-209ENST00000554879 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
PCNX1-209ENST00000554879 HDGFP51858 240 aaKnown RBP21.95■■□□□ 1.1
PCNX1-209ENST00000554879 IDI1Q13907 227 aa21.95■■□□□ 1.1
PCNX1-209ENST00000554879 STAC3Q96MF2 364 aa21.95■■□□□ 1.1
PCNX1-209ENST00000554879 MINK1Q8N4C8 1332 aaPredicted RBP21.95■■□□□ 1.1
PCNX1-209ENST00000554879 GLIPR1L2Q4G1C9 344 aa21.94■■□□□ 1.1
PCNX1-209ENST00000554879 TEX14Q8IWB6 1497 aa21.94■■□□□ 1.1
PCNX1-209ENST00000554879 ABCC1P33527 1531 aa21.93■■□□□ 1.1
PCNX1-209ENST00000554879 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
PCNX1-209ENST00000554879 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
PCNX1-209ENST00000554879 MORC1Q86VD1 984 aa21.92■■□□□ 1.1
PCNX1-209ENST00000554879 NUTM2FA1L443 756 aa21.91■■□□□ 1.1
PCNX1-209ENST00000554879 NLRP13Q86W25 1043 aa21.9■■□□□ 1.1
PCNX1-209ENST00000554879 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
PCNX1-209ENST00000554879 SLC52A1Q9NWF4 448 aa21.9■■□□□ 1.1
PCNX1-209ENST00000554879 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
PCNX1-209ENST00000554879 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
PCNX1-209ENST00000554879 NEFMP07197 916 aa21.87■■□□□ 1.09
PCNX1-209ENST00000554879 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
PCNX1-209ENST00000554879 DAXXQ9UER7 740 aaPredicted RBP21.86■■□□□ 1.09
PCNX1-209ENST00000554879 POGZQ7Z3K3 1410 aa21.86■■□□□ 1.09
PCNX1-209ENST00000554879 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
PCNX1-209ENST00000554879 IL27Q8NEV9 243 aa21.84■■□□□ 1.09
PCNX1-209ENST00000554879 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
PCNX1-209ENST00000554879 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.09
PCNX1-209ENST00000554879 CEBPAP49715 358 aaPredicted RBP21.83■■□□□ 1.09
PCNX1-209ENST00000554879 NOS1P29475 1434 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms