RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
TGFBR1-208ENST00000550253 CLCN1P35523 988 aa10.87□□□□□ -0.67
TGFBR1-208ENST00000550253 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
TGFBR1-208ENST00000550253 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
TGFBR1-208ENST00000550253 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
TGFBR1-208ENST00000550253 PHOX2BQ99453 314 aa10.85□□□□□ -0.67
TGFBR1-208ENST00000550253 CDHR5Q9HBB8 845 aa10.85□□□□□ -0.67
TGFBR1-208ENST00000550253 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
TGFBR1-208ENST00000550253 L3MBTL3Q96JM7 780 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-208ENST00000550253 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-208ENST00000550253 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-208ENST00000550253 ASTLQ6HA08 431 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-208ENST00000550253 PTCD2Q8WV60 388 aaKnown RBP10.84□□□□□ -0.67
TGFBR1-208ENST00000550253 EN1Q05925 392 aaPredicted RBP10.83□□□□□ -0.68
TGFBR1-208ENST00000550253 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
TGFBR1-208ENST00000550253 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
TGFBR1-208ENST00000550253 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
TGFBR1-208ENST00000550253 PLCG2P16885 1265 aa10.81□□□□□ -0.68
TGFBR1-208ENST00000550253 CLCN6P51797 869 aa10.81□□□□□ -0.68
TGFBR1-208ENST00000550253 NPM2Q86SE8 214 aaKnown RBP10.8□□□□□ -0.68
TGFBR1-208ENST00000550253 PROCA1Q8NCQ7 364 aaPredicted RBP10.8□□□□□ -0.68
TGFBR1-208ENST00000550253 PHF14O94880 888 aa10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 POM121Q96HA1 1249 aa10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 EPAS1Q99814 870 aa10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 BEGAINQ9BUH8 593 aa10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
TGFBR1-208ENST00000550253 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
TGFBR1-208ENST00000550253 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
TGFBR1-208ENST00000550253 MAP3K7O43318 606 aa10.77□□□□□ -0.69
TGFBR1-208ENST00000550253 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
TGFBR1-208ENST00000550253 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
TGFBR1-208ENST00000550253 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
TGFBR1-208ENST00000550253 SLC34A2O95436 690 aa10.76□□□□□ -0.69
TGFBR1-208ENST00000550253 POLR3EQ9NVU0 708 aa10.75□□□□□ -0.69
TGFBR1-208ENST00000550253 SHROOM4Q9ULL8 1493 aa10.75□□□□□ -0.69
TGFBR1-208ENST00000550253 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 PCDHGA10Q9Y5H3 936 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 SPDYE5A6NIY4 337 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 RAD21O60216 631 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
TGFBR1-208ENST00000550253 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
TGFBR1-208ENST00000550253 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
TGFBR1-208ENST00000550253 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
TGFBR1-208ENST00000550253 COLQQ9Y215 455 aaPredicted RBP10.71□□□□□ -0.69
TGFBR1-208ENST00000550253 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
TGFBR1-208ENST00000550253 OATP04181 439 aa10.7□□□□□ -0.7
TGFBR1-208ENST00000550253 EVX2Q03828 476 aa10.7□□□□□ -0.7
TGFBR1-208ENST00000550253 NLRP7Q8WX94 980 aa10.7□□□□□ -0.7
TGFBR1-208ENST00000550253 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
TGFBR1-208ENST00000550253 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
TGFBR1-208ENST00000550253 CCDC97Q96F63 343 aaPredicted RBP10.69□□□□□ -0.7
TGFBR1-208ENST00000550253 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
TGFBR1-208ENST00000550253 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
TGFBR1-208ENST00000550253 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 CLK2P49760 499 aaKnown RBP10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
TGFBR1-208ENST00000550253 RFC5P40937 340 aa10.67□□□□□ -0.7
TGFBR1-208ENST00000550253 SEC24BO95487 1268 aa10.66□□□□□ -0.7
TGFBR1-208ENST00000550253 FBXO31Q5XUX0 539 aaPredicted RBP10.66□□□□□ -0.7
TGFBR1-208ENST00000550253 FBXW7Q969H0 707 aa10.66□□□□□ -0.7
TGFBR1-208ENST00000550253 PADI6Q6TGC4 694 aa10.65□□□□□ -0.7
TGFBR1-208ENST00000550253 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
TGFBR1-208ENST00000550253 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
TGFBR1-208ENST00000550253 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
TGFBR1-208ENST00000550253 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
TGFBR1-208ENST00000550253 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
TGFBR1-208ENST00000550253 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
TGFBR1-208ENST00000550253 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
TGFBR1-208ENST00000550253 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
TGFBR1-208ENST00000550253 POTEFA5A3E0 1075 aa10.62□□□□□ -0.71
TGFBR1-208ENST00000550253 HAX1O00165 279 aa10.62□□□□□ -0.71
TGFBR1-208ENST00000550253 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
TGFBR1-208ENST00000550253 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
TGFBR1-208ENST00000550253 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
TGFBR1-208ENST00000550253 KCTD17Q8N5Z5 321 aa10.61□□□□□ -0.71
TGFBR1-208ENST00000550253 RBM27Q9P2N5 1060 aaKnown RBP10.61□□□□□ -0.71
TGFBR1-208ENST00000550253 LIMD1Q9UGP4 676 aa10.61□□□□□ -0.71
TGFBR1-208ENST00000550253 C6orf132Q5T0Z8 1188 aa10.6□□□□□ -0.71
TGFBR1-208ENST00000550253 C3orf67Q6ZVT6 689 aa10.59□□□□□ -0.71
TGFBR1-208ENST00000550253 FOSBP53539 338 aa10.58□□□□□ -0.72
TGFBR1-208ENST00000550253 MTMR14Q8NCE2 650 aa10.58□□□□□ -0.72
TGFBR1-208ENST00000550253 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
TGFBR1-208ENST00000550253 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
TGFBR1-208ENST00000550253 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
TGFBR1-208ENST00000550253 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
TGFBR1-208ENST00000550253 GDPD2Q9HCC8 539 aa10.55□□□□□ -0.72
TGFBR1-208ENST00000550253 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
TGFBR1-208ENST00000550253 SLC39A7Q92504 469 aa10.54□□□□□ -0.72
TGFBR1-208ENST00000550253 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
TGFBR1-208ENST00000550253 SOCS7O14512 581 aa10.53□□□□□ -0.72
TGFBR1-208ENST00000550253 PRSS12P56730 875 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms