RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.16
SNHG1-211ENST00000539921 SPDYE2BA6NHP3 402 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 SPDYE6P0CI01 402 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
SNHG1-211ENST00000539921 RIPK4P57078 832 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-211ENST00000539921 CACNB1Q02641 598 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-211ENST00000539921 PDE3BQ13370 1112 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 SPDYE2Q495Y8 402 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
SNHG1-211ENST00000539921 RGS22Q8NE09 1264 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 CHMP4AQ9BY43 222 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 SSUH2Q9Y2M2 353 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 MYOM3Q5VTT5 1437 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 AKNAQ7Z591 1439 aa7.83□□□□□ -1.16
SNHG1-211ENST00000539921 NCOA1Q15788 1441 aa7.82□□□□□ -1.16
SNHG1-211ENST00000539921 FAM161AQ3B820 660 aa7.82□□□□□ -1.16
SNHG1-211ENST00000539921 PABPN1Q86U42 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
SNHG1-211ENST00000539921 ZSCAN30Q86W11 494 aa7.82□□□□□ -1.16
SNHG1-211ENST00000539921 CREBRFQ8IUR6 639 aa7.82□□□□□ -1.16
SNHG1-211ENST00000539921 ZNF622Q969S3 477 aaKnown RBP eCLIP7.82□□□□□ -1.16
SNHG1-211ENST00000539921 PPP1R9BQ96SB3 815 aa7.82□□□□□ -1.16
SNHG1-211ENST00000539921 DNAJC2Q99543 621 aaKnown RBP7.82□□□□□ -1.16
SNHG1-211ENST00000539921 PRKRIP1Q9H875 184 aaPredicted RBP7.82□□□□□ -1.16
SNHG1-211ENST00000539921 TOP2AP11388 1531 aaKnown RBP7.82□□□□□ -1.16
SNHG1-211ENST00000539921 BICRAQ9NZM4 1560 aa7.81□□□□□ -1.16
SNHG1-211ENST00000539921 ZNF500O60304 480 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-211ENST00000539921 CDK11BP21127 795 aaKnown RBP7.81□□□□□ -1.16
SNHG1-211ENST00000539921 CCDC173Q0VFZ6 552 aa7.81□□□□□ -1.16
SNHG1-211ENST00000539921 POGKQ9P215 609 aa7.81□□□□□ -1.16
SNHG1-211ENST00000539921 ROCK2O75116 1388 aaKnown RBP7.81□□□□□ -1.16
SNHG1-211ENST00000539921 KDM5BQ9UGL1 1544 aa7.8□□□□□ -1.16
SNHG1-211ENST00000539921 PTMAP06454 111 aaKnown RBP7.8□□□□□ -1.16
SNHG1-211ENST00000539921 RRP1P56182 461 aaKnown RBP7.8□□□□□ -1.16
SNHG1-211ENST00000539921 DDX11L8A8MPP1 907 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 PKD2Q13563 968 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 PLCD3Q8N3E9 789 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 CEP120Q8N960 986 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 GRPEL1Q9HAV7 217 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 TONSLQ96HA7 1378 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 PLEKHH2Q8IVE3 1493 aa7.79□□□□□ -1.16
SNHG1-211ENST00000539921 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
SNHG1-211ENST00000539921 SPOCK2Q92563 424 aa7.78□□□□□ -1.16
SNHG1-211ENST00000539921 GEMIN8Q9NWZ8 242 aaKnown RBP7.78□□□□□ -1.16
SNHG1-211ENST00000539921 CCDC18Q5T9S5 1454 aa7.78□□□□□ -1.16
SNHG1-211ENST00000539921 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
SNHG1-211ENST00000539921 SKOR2Q2VWA4 1001 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-211ENST00000539921 CENPQQ7L2Z9 268 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-211ENST00000539921 SECISBP2LQ93073 1101 aaKnown RBP7.77□□□□□ -1.17
SNHG1-211ENST00000539921 ZNF830Q96NB3 372 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-211ENST00000539921 ANTXR1Q9H6X2 564 aa7.77□□□□□ -1.17
SNHG1-211ENST00000539921 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
SNHG1-211ENST00000539921 SCRIBQ14160 1630 aa7.77□□□□□ -1.17
SNHG1-211ENST00000539921 ARHGAP31Q2M1Z3 1444 aa7.77□□□□□ -1.17
SNHG1-211ENST00000539921 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
SNHG1-211ENST00000539921 MROH2BQ7Z745 1585 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 LRPPRCP42704 1394 aaKnown RBP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 CCDC66A2RUB6 948 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 ECM2O94769 699 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 GTF2F1P35269 517 aaKnown RBP eCLIP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 SASS6Q6UVJ0 657 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 ZHX1Q9UKY1 873 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-211ENST00000539921 UACAQ9BZF9 1416 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 CTTNBP2Q8WZ74 1663 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 KDM2BQ8NHM5 1336 aa7.76□□□□□ -1.17
SNHG1-211ENST00000539921 MSNP26038 577 aaKnown RBP7.75□□□□□ -1.17
SNHG1-211ENST00000539921 MCM4P33991 863 aa7.75□□□□□ -1.17
SNHG1-211ENST00000539921 HMGN5P82970 282 aaKnown RBP7.75□□□□□ -1.17
SNHG1-211ENST00000539921 GABPB1Q06547 395 aaPredicted RBP7.75□□□□□ -1.17
SNHG1-211ENST00000539921 GRIPAP1Q4V328 841 aa7.75□□□□□ -1.17
SNHG1-211ENST00000539921 SIN3AQ96ST3 1273 aa7.75□□□□□ -1.17
SNHG1-211ENST00000539921 STAG3Q9UJ98 1225 aa7.75□□□□□ -1.17
SNHG1-211ENST00000539921 CCDC7Q96M83 1385 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 C8orf34Q49A92 452 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 DNTTIP2Q5QJE6 756 aaKnown RBP7.74□□□□□ -1.17
SNHG1-211ENST00000539921 PRIMPOLQ96LW4 560 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 EFCC1Q9HA90 598 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 MIA2Q96PC5 1412 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 YEATS2Q9ULM3 1422 aa7.74□□□□□ -1.17
SNHG1-211ENST00000539921 PHF14O94880 888 aa7.73□□□□□ -1.17
SNHG1-211ENST00000539921 NBPF1Q3BBV0 1214 aa7.73□□□□□ -1.17
SNHG1-211ENST00000539921 CFAP44Q96MT7 982 aa7.73□□□□□ -1.17
SNHG1-211ENST00000539921 FEZ1Q99689 392 aa7.73□□□□□ -1.17
SNHG1-211ENST00000539921 NOL7Q9UMY1 257 aaKnown RBP7.73□□□□□ -1.17
SNHG1-211ENST00000539921 UHRF1BP1LA0JNW5 1464 aa7.73□□□□□ -1.17
SNHG1-211ENST00000539921 EIF3AQ14152 1382 aaKnown RBP7.72□□□□□ -1.17
SNHG1-211ENST00000539921 TIAM1Q13009 1591 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 UQCRHLA0A096LP55 91 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 UQCRHP07919 91 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 MCCP23508 829 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 CTR9Q6PD62 1173 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 WIZO95785 1651 aa7.72□□□□□ -1.17
SNHG1-211ENST00000539921 TULP1O00294 542 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-211ENST00000539921 PSEN1P49768 467 aa7.71□□□□□ -1.18
SNHG1-211ENST00000539921 RALBP1Q15311 655 aa7.71□□□□□ -1.18
SNHG1-211ENST00000539921 PANK2Q9BZ23 570 aa7.71□□□□□ -1.18
SNHG1-211ENST00000539921 CHMP5Q9NZZ3 219 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms