RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 MICAL1Q8TDZ2 1067 aa11.32□□□□□ -0.6
ARHGEF12-211ENST00000531616 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 TEX2Q8IWB9 1127 aa11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 RBM27Q9P2N5 1060 aaKnown RBP11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
ARHGEF12-211ENST00000531616 CUX2O14529 1486 aa11.3□□□□□ -0.6
ARHGEF12-211ENST00000531616 PEX14O75381 377 aa11.3□□□□□ -0.6
ARHGEF12-211ENST00000531616 MS4A1P11836 297 aa11.3□□□□□ -0.6
ARHGEF12-211ENST00000531616 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF12-211ENST00000531616 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
ARHGEF12-211ENST00000531616 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 TXNDC2Q86VQ3 553 aa11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 CALR3Q96L12 384 aaKnown RBP11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 SNRKQ9NRH2 765 aa11.29□□□□□ -0.6
ARHGEF12-211ENST00000531616 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF12-211ENST00000531616 HIRIP3Q9BW71 556 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF12-211ENST00000531616 SMYD5Q6GMV2 418 aa11.27□□□□□ -0.6
ARHGEF12-211ENST00000531616 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 SPINK5Q9NQ38 1064 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 PYGBP11216 843 aa11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 FECHP22830 423 aa11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 GDPD2Q9HCC8 539 aa11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 RYDENQ9NUL5 291 aaKnown RBP11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
ARHGEF12-211ENST00000531616 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
ARHGEF12-211ENST00000531616 TCF3P15923 654 aa11.25□□□□□ -0.61
ARHGEF12-211ENST00000531616 NOM1Q5C9Z4 860 aaKnown RBP11.24□□□□□ -0.61
ARHGEF12-211ENST00000531616 KLHL42Q9P2K6 505 aa11.24□□□□□ -0.61
ARHGEF12-211ENST00000531616 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
ARHGEF12-211ENST00000531616 GLMNQ92990 594 aa11.24□□□□□ -0.61
ARHGEF12-211ENST00000531616 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
ARHGEF12-211ENST00000531616 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
ARHGEF12-211ENST00000531616 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 KCNA1Q09470 495 aa11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
ARHGEF12-211ENST00000531616 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
ARHGEF12-211ENST00000531616 NUBP1P53384 320 aa11.21□□□□□ -0.61
ARHGEF12-211ENST00000531616 SGSM3Q96HU1 749 aa11.21□□□□□ -0.61
ARHGEF12-211ENST00000531616 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
ARHGEF12-211ENST00000531616 GPR37O15354 613 aa11.21□□□□□ -0.62
ARHGEF12-211ENST00000531616 ZNF16P17020 682 aaPredicted RBP11.21□□□□□ -0.62
ARHGEF12-211ENST00000531616 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.62
ARHGEF12-211ENST00000531616 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
ARHGEF12-211ENST00000531616 EVI5LQ96CN4 794 aa11.2□□□□□ -0.62
ARHGEF12-211ENST00000531616 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
ARHGEF12-211ENST00000531616 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
ARHGEF12-211ENST00000531616 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
ARHGEF12-211ENST00000531616 ANAPC15P60006 121 aa11.19□□□□□ -0.62
ARHGEF12-211ENST00000531616 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
ARHGEF12-211ENST00000531616 GSE1Q14687 1217 aa11.19□□□□□ -0.62
ARHGEF12-211ENST00000531616 PLCD4Q9BRC7 762 aa11.19□□□□□ -0.62
ARHGEF12-211ENST00000531616 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF12-211ENST00000531616 TPD52L2O43399 206 aaKnown RBP11.18□□□□□ -0.62
ARHGEF12-211ENST00000531616 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
ARHGEF12-211ENST00000531616 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
ARHGEF12-211ENST00000531616 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
ARHGEF12-211ENST00000531616 WDR62O43379 1518 aa11.16□□□□□ -0.62
ARHGEF12-211ENST00000531616 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
ARHGEF12-211ENST00000531616 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.62
ARHGEF12-211ENST00000531616 GIGYF2Q6Y7W6 1299 aaKnown RBP11.15□□□□□ -0.62
ARHGEF12-211ENST00000531616 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.63
ARHGEF12-211ENST00000531616 MYH16Q9H6N6 1097 aa11.15□□□□□ -0.63
ARHGEF12-211ENST00000531616 PPP1R15AO75807 674 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF12-211ENST00000531616 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF12-211ENST00000531616 CFTRP13569 1480 aa11.13□□□□□ -0.63
ARHGEF12-211ENST00000531616 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
ARHGEF12-211ENST00000531616 ABL2P42684 1182 aa11.13□□□□□ -0.63
ARHGEF12-211ENST00000531616 NAALADL2Q58DX5 795 aa11.12□□□□□ -0.63
ARHGEF12-211ENST00000531616 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
ARHGEF12-211ENST00000531616 ADAMTS19Q8TE59 1207 aa11.12□□□□□ -0.63
ARHGEF12-211ENST00000531616 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
ARHGEF12-211ENST00000531616 BCL2L13Q9BXK5 485 aa11.11□□□□□ -0.63
ARHGEF12-211ENST00000531616 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF12-211ENST00000531616 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
ARHGEF12-211ENST00000531616 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
ARHGEF12-211ENST00000531616 SCNN1AP37088 669 aa11.09□□□□□ -0.63
ARHGEF12-211ENST00000531616 IRF6O14896 467 aa11.09□□□□□ -0.63
ARHGEF12-211ENST00000531616 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
ARHGEF12-211ENST00000531616 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
ARHGEF12-211ENST00000531616 GABBR1Q9UBS5 961 aa11.09□□□□□ -0.63
ARHGEF12-211ENST00000531616 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.64
ARHGEF12-211ENST00000531616 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
ARHGEF12-211ENST00000531616 AMHR2Q16671 573 aa11.08□□□□□ -0.64
ARHGEF12-211ENST00000531616 DNAJC14Q6Y2X3 702 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF12-211ENST00000531616 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
ARHGEF12-211ENST00000531616 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
ARHGEF12-211ENST00000531616 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF12-211ENST00000531616 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
ARHGEF12-211ENST00000531616 TMTC2Q8N394 836 aa11.06□□□□□ -0.64
ARHGEF12-211ENST00000531616 TBC1D12O60347 775 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms