RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 GALR2O43603 387 aaPredicted RBP3.62□□□□□ -1.83
FGFR1-235ENST00000530701 SSTR3P32745 418 aaPredicted RBP3.62□□□□□ -1.83
FGFR1-235ENST00000530701 IRX5P78411 483 aaPredicted RBP3.62□□□□□ -1.83
FGFR1-235ENST00000530701 MDM2Q00987 491 aaPredicted RBP3.62□□□□□ -1.83
FGFR1-235ENST00000530701 DIXDC1Q155Q3 683 aa3.62□□□□□ -1.83
FGFR1-235ENST00000530701 EPAS1Q99814 870 aa3.62□□□□□ -1.83
FGFR1-235ENST00000530701 PRM3Q9NNZ6 103 aa3.62□□□□□ -1.83
FGFR1-235ENST00000530701 ONECUT3O60422 494 aaPredicted RBP3.61□□□□□ -1.83
FGFR1-235ENST00000530701 PHF14O94880 888 aa3.61□□□□□ -1.83
FGFR1-235ENST00000530701 OATP04181 439 aa3.61□□□□□ -1.83
FGFR1-235ENST00000530701 HRCP23327 699 aa3.61□□□□□ -1.83
FGFR1-235ENST00000530701 ATN1P54259 1190 aaPredicted RBP3.61□□□□□ -1.83
FGFR1-235ENST00000530701 EN1Q05925 392 aaPredicted RBP3.61□□□□□ -1.83
FGFR1-235ENST00000530701 C3orf67Q6ZVT6 689 aa3.61□□□□□ -1.83
FGFR1-235ENST00000530701 RBM33Q96EV2 1170 aaKnown RBP3.61□□□□□ -1.83
FGFR1-235ENST00000530701 BEGAINQ9BUH8 593 aa3.61□□□□□ -1.83
FGFR1-235ENST00000530701 ZNF777Q9ULD5 760 aaPredicted RBP3.61□□□□□ -1.83
FGFR1-235ENST00000530701 KCTD17Q8N5Z5 321 aa3.6□□□□□ -1.83
FGFR1-235ENST00000530701 CERKQ8TCT0 537 aa3.6□□□□□ -1.83
FGFR1-235ENST00000530701 POLR3EQ9NVU0 708 aa3.6□□□□□ -1.83
FGFR1-235ENST00000530701 SPDYE5A6NIY4 337 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 HAX1O00165 279 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 ATMINO43313 823 aaPredicted RBP3.59□□□□□ -1.83
FGFR1-235ENST00000530701 PDE4CQ08493 712 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 TYW1BQ6NUM6 668 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 SLAIN1Q8ND83 568 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 PTCD2Q8WV60 388 aaKnown RBP3.59□□□□□ -1.83
FGFR1-235ENST00000530701 FBXW7Q969H0 707 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 REPIN1Q9BWE0 567 aaKnown RBP3.59□□□□□ -1.83
FGFR1-235ENST00000530701 CDHR5Q9HBB8 845 aa3.59□□□□□ -1.83
FGFR1-235ENST00000530701 ZNF330Q9Y3S2 320 aaPredicted RBP3.59□□□□□ -1.83
FGFR1-235ENST00000530701 CLK2P49760 499 aaKnown RBP3.58□□□□□ -1.84
FGFR1-235ENST00000530701 TMEM259Q4ZIN3 620 aa3.58□□□□□ -1.84
FGFR1-235ENST00000530701 ASTLQ6HA08 431 aaPredicted RBP3.58□□□□□ -1.84
FGFR1-235ENST00000530701 BANK1Q8NDB2 785 aa3.58□□□□□ -1.84
FGFR1-235ENST00000530701 ANO8Q9HCE9 1232 aaPredicted RBP3.58□□□□□ -1.84
FGFR1-235ENST00000530701 FAM217BQ9NTX9 383 aaPredicted RBP3.58□□□□□ -1.84
FGFR1-235ENST00000530701 ACIN1Q9UKV3 1341 aaKnown RBP3.58□□□□□ -1.84
FGFR1-235ENST00000530701 SLC34A2O95436 690 aa3.57□□□□□ -1.84
FGFR1-235ENST00000530701 PRIM1P49642 420 aaKnown RBP3.57□□□□□ -1.84
FGFR1-235ENST00000530701 TSR1Q2NL82 804 aaKnown RBP3.57□□□□□ -1.84
FGFR1-235ENST00000530701 MYSM1Q5VVJ2 828 aa3.57□□□□□ -1.84
FGFR1-235ENST00000530701 METTL3Q86U44 580 aaKnown RBP3.57□□□□□ -1.84
FGFR1-235ENST00000530701 AEBP1Q8IUX7 1158 aa3.57□□□□□ -1.84
FGFR1-235ENST00000530701 PROCA1Q8NCQ7 364 aaPredicted RBP3.57□□□□□ -1.84
FGFR1-235ENST00000530701 RBM46Q8TBY0 533 aaKnown RBP3.57□□□□□ -1.84
FGFR1-235ENST00000530701 POM121Q96HA1 1249 aa3.57□□□□□ -1.84
FGFR1-235ENST00000530701 RFC5P40937 340 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 TMEM92Q6UXU6 159 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 NUTM1Q86Y26 1132 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 JPH4Q96JJ6 628 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 CALR3Q96L12 384 aaKnown RBP3.56□□□□□ -1.84
FGFR1-235ENST00000530701 DCBLD2Q96PD2 775 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 TMUB1Q9BVT8 246 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 TRAIPQ9BWF2 469 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 NPDC1Q9NQX5 325 aaPredicted RBP3.56□□□□□ -1.84
FGFR1-235ENST00000530701 COG6Q9Y2V7 657 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 PCDHGA10Q9Y5H3 936 aa3.56□□□□□ -1.84
FGFR1-235ENST00000530701 FAM161AQ3B820 660 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 PADI6Q6TGC4 694 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 SULF1Q8IWU6 871 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 FNBP4Q8N3X1 1017 aaPredicted RBP3.55□□□□□ -1.84
FGFR1-235ENST00000530701 PXYLP1Q8TE99 480 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 PHOX2BQ99453 314 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.55□□□□□ -1.84
FGFR1-235ENST00000530701 TBC1D2Q9BYX2 928 aa3.55□□□□□ -1.84
FGFR1-235ENST00000530701 RBM27Q9P2N5 1060 aaKnown RBP3.55□□□□□ -1.84
FGFR1-235ENST00000530701 PATL2C9JE40 543 aaKnown RBP3.54□□□□□ -1.84
FGFR1-235ENST00000530701 PPP1R15AO75807 674 aaPredicted RBP3.54□□□□□ -1.84
FGFR1-235ENST00000530701 ABL2P42684 1182 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 TMCO4Q5TGY1 634 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 RIC3Q7Z5B4 369 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 NLRP7Q8WX94 980 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 SLC39A7Q92504 469 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 PLSCR2Q9NRY7 297 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 ADGRG1Q9Y653 693 aa3.54□□□□□ -1.84
FGFR1-235ENST00000530701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 NUTM2BA6NNL0 878 aaPredicted RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 NUTM2EB1AL46 878 aaPredicted RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 CSPP1Q1MSJ5 1256 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 C6orf132Q5T0Z8 1188 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 NUTM2DQ5VT03 806 aaPredicted RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 NUTM2AQ8IVF1 878 aaPredicted RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 ZNF454Q8N9F8 522 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 RETREG2Q8NC44 543 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 NECTIN2Q92692 538 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 ZDHHC16Q969W1 377 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 GDPD2Q9HCC8 539 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 SNRKQ9NRH2 765 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.53□□□□□ -1.84
FGFR1-235ENST00000530701 PCDHGA4Q9Y5G9 962 aa3.53□□□□□ -1.84
FGFR1-235ENST00000530701 RIMBP2O15034 1052 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 AP1G2O75843 785 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 C7P10643 843 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 PRSS12P56730 875 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 RSPH4AQ5TD94 716 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 PPP2R2DQ66LE6 453 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 SPIRE2Q8WWL2 714 aa3.52□□□□□ -1.85
FGFR1-235ENST00000530701 DDX11L8A8MPP1 907 aa3.51□□□□□ -1.85
FGFR1-235ENST00000530701 SOCS7O14512 581 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms