RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 PROCA1Q8NCQ7 364 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 DRC1Q96MC2 740 aa5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 ZNF330Q9Y3S2 320 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 CAMK2BQ13554 666 aa5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 POTEDQ86YR6 584 aa5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 ARIH1Q9Y4X5 557 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 PRIM1P49642 420 aaKnown RBP5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 ZBTB12Q9Y330 459 aaPredicted RBP5.39□□□□□ -1.55
ARHGEF12-209ENST00000530388 MFSD10Q14728 455 aa5.38□□□□□ -1.55
ARHGEF12-209ENST00000530388 DPYSL4O14531 572 aa5.38□□□□□ -1.55
ARHGEF12-209ENST00000530388 TTLL12Q14166 644 aaPredicted RBP5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 CALR3Q96L12 384 aaKnown RBP5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 IVNS1ABPQ9Y6Y0 642 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 PHOX2BQ99453 314 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 POM121CA8CG34 1229 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 SPATA32Q96LK8 384 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 SNRKQ9NRH2 765 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 COG6Q9Y2V7 657 aa5.37□□□□□ -1.55
ARHGEF12-209ENST00000530388 BRD1O95696 1058 aa5.36□□□□□ -1.55
ARHGEF12-209ENST00000530388 AMHR2Q16671 573 aa5.36□□□□□ -1.55
ARHGEF12-209ENST00000530388 LAS1LQ9Y4W2 734 aaKnown RBP5.36□□□□□ -1.55
ARHGEF12-209ENST00000530388 IRF6O14896 467 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 ANAPC15P60006 121 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 FGD1P98174 961 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 NLRP7Q8WX94 980 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 DDX27Q96GQ7 796 aaKnown RBP5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 MARCH6O60337 910 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 HSP90AB4PQ58FF6 505 aa5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
ARHGEF12-209ENST00000530388 GIGYF2Q6Y7W6 1299 aaKnown RBP5.34□□□□□ -1.55
ARHGEF12-209ENST00000530388 RFX1P22670 979 aa5.34□□□□□ -1.55
ARHGEF12-209ENST00000530388 EXOC8Q8IYI6 725 aa5.34□□□□□ -1.55
ARHGEF12-209ENST00000530388 FOSBP53539 338 aa5.34□□□□□ -1.56
ARHGEF12-209ENST00000530388 TEX2Q8IWB9 1127 aa5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 CABP2Q9NPB3 220 aa5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 PLEKHD1A6NEE1 506 aa5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 SND1Q7KZF4 910 aaKnown RBP eCLIP5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 TSPYL2Q9H2G4 693 aaPredicted RBP5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 IGSF5Q9NSI5 407 aa5.33□□□□□ -1.56
ARHGEF12-209ENST00000530388 TMED8Q6PL24 325 aaPredicted RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 ADAMTS19Q8TE59 1207 aa5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 PSEN1P49768 467 aa5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 NOM1Q5C9Z4 860 aaKnown RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 GPATCH11Q8N954 259 aa5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 MRRFQ96E11 262 aaKnown RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 PRDM16Q9HAZ2 1276 aa5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 RBM27Q9P2N5 1060 aaKnown RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 HIRIP3Q9BW71 556 aaPredicted RBP5.32□□□□□ -1.56
ARHGEF12-209ENST00000530388 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 PDAP1Q13442 181 aaKnown RBP5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 KIAA1522Q9P206 1035 aaPredicted RBP5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 TPD52L2O43399 206 aaKnown RBP5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 MAP2K5Q13163 448 aa5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 SF3A1Q15459 793 aaKnown RBP5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 PRDM10Q9NQV6 1147 aa5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 POLR3EQ9NVU0 708 aa5.31□□□□□ -1.56
ARHGEF12-209ENST00000530388 IFNL1Q8IU54 200 aa5.3□□□□□ -1.56
ARHGEF12-209ENST00000530388 PRM3Q9NNZ6 103 aa5.3□□□□□ -1.56
ARHGEF12-209ENST00000530388 GOPCQ9HD26 462 aa5.3□□□□□ -1.56
ARHGEF12-209ENST00000530388 TCF3P15923 654 aa5.3□□□□□ -1.56
ARHGEF12-209ENST00000530388 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 GDPD2Q9HCC8 539 aa5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 UBXN4Q92575 508 aa5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 CLSPNQ9HAW4 1339 aa5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 YTHDC1Q96MU7 727 aaKnown RBP5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 USTQ9Y2C2 406 aa5.29□□□□□ -1.56
ARHGEF12-209ENST00000530388 LOC102724159A0A0B4J2E5 919 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 PWP2Q15269 919 aaKnown RBP5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 FAM161AQ3B820 660 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 CLEC11AQ9Y240 323 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 RIPOR2Q9Y4F9 1068 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 GRXCR2A6NFK2 248 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 FARP1Q9Y4F1 1045 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 MINK1Q8N4C8 1332 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 SOX12O15370 315 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 PDIA6Q15084 440 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 B4GALNT3Q6L9W6 998 aa5.28□□□□□ -1.56
ARHGEF12-209ENST00000530388 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 RTL5Q5HYW3 569 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 MORC4Q8TE76 937 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 BCL2L13Q9BXK5 485 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 NUTM2FA1L443 756 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 OS9Q13438 667 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 SKIV2LQ15477 1246 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 OSBPP22059 807 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 MTMR14Q8NCE2 650 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 NEFMP07197 916 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 PBXIP1Q96AQ6 731 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 PPME1Q9Y570 386 aa5.27□□□□□ -1.57
ARHGEF12-209ENST00000530388 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.26□□□□□ -1.57
ARHGEF12-209ENST00000530388 DSG2Q14126 1118 aa5.26□□□□□ -1.57
ARHGEF12-209ENST00000530388 CHADLQ6NUI6 762 aa5.26□□□□□ -1.57
ARHGEF12-209ENST00000530388 GLMNQ92990 594 aa5.26□□□□□ -1.57
ARHGEF12-209ENST00000530388 CCDC61Q9Y6R9 512 aa5.26□□□□□ -1.57
ARHGEF12-209ENST00000530388 PDE4AP27815 886 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms