RNA–Protein interactions for RNA: ENST00000528781.1

AP001189.6-201, humanhuman

TSL 1 (best) BASIC

Gene AP001189.6, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.6-201ENST00000528781 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
AP001189.6-201ENST00000528781 WBP1LQ9NX94 342 aa8.45□□□□□ -1.06
AP001189.6-201ENST00000528781 TRAF7Q6Q0C0 670 aa8.43□□□□□ -1.06
AP001189.6-201ENST00000528781 KIAA1468Q9P260 1216 aa8.42□□□□□ -1.06
AP001189.6-201ENST00000528781 ONECUT3O60422 494 aaPredicted RBP8.41□□□□□ -1.06
AP001189.6-201ENST00000528781 CHGAP10645 457 aaKnown RBP8.41□□□□□ -1.06
AP001189.6-201ENST00000528781 MAP3K9P80192 1104 aa8.41□□□□□ -1.06
AP001189.6-201ENST00000528781 RYDENQ9NUL5 291 aaKnown RBP8.41□□□□□ -1.06
AP001189.6-201ENST00000528781 GFRA3O60609 400 aa8.4□□□□□ -1.06
AP001189.6-201ENST00000528781 FBXW7Q969H0 707 aa8.4□□□□□ -1.06
AP001189.6-201ENST00000528781 EMILIN3Q9NT22 766 aa8.39□□□□□ -1.07
AP001189.6-201ENST00000528781 PHF14O94880 888 aa8.38□□□□□ -1.07
AP001189.6-201ENST00000528781 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
AP001189.6-201ENST00000528781 DDX27Q96GQ7 796 aaKnown RBP8.38□□□□□ -1.07
AP001189.6-201ENST00000528781 MFSD10Q14728 455 aa8.37□□□□□ -1.07
AP001189.6-201ENST00000528781 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
AP001189.6-201ENST00000528781 SEPT9Q9UHD8 586 aaPredicted RBP8.37□□□□□ -1.07
AP001189.6-201ENST00000528781 TSR3Q9UJK0 312 aaKnown RBP8.37□□□□□ -1.07
AP001189.6-201ENST00000528781 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
AP001189.6-201ENST00000528781 C6orf132Q5T0Z8 1188 aa8.34□□□□□ -1.07
AP001189.6-201ENST00000528781 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.34□□□□□ -1.07
AP001189.6-201ENST00000528781 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
AP001189.6-201ENST00000528781 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
AP001189.6-201ENST00000528781 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
AP001189.6-201ENST00000528781 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
AP001189.6-201ENST00000528781 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
AP001189.6-201ENST00000528781 TJAP1Q5JTD0 557 aa8.3□□□□□ -1.08
AP001189.6-201ENST00000528781 EPAS1Q99814 870 aa8.3□□□□□ -1.08
AP001189.6-201ENST00000528781 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
AP001189.6-201ENST00000528781 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
AP001189.6-201ENST00000528781 ZNF787Q6DD87 383 aa8.26□□□□□ -1.09
AP001189.6-201ENST00000528781 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
AP001189.6-201ENST00000528781 PPP4CP60510 307 aa8.25□□□□□ -1.09
AP001189.6-201ENST00000528781 TSKSQ9UJT2 592 aa8.24□□□□□ -1.09
AP001189.6-201ENST00000528781 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
AP001189.6-201ENST00000528781 CAMK2BQ13554 666 aa8.22□□□□□ -1.09
AP001189.6-201ENST00000528781 PACS2Q86VP3 889 aa8.22□□□□□ -1.09
AP001189.6-201ENST00000528781 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
AP001189.6-201ENST00000528781 MTRQ99707 1265 aa8.22□□□□□ -1.09
AP001189.6-201ENST00000528781 IL21Q9HBE4 155 aa8.22□□□□□ -1.09
AP001189.6-201ENST00000528781 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.2□□□□□ -1.1
AP001189.6-201ENST00000528781 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
AP001189.6-201ENST00000528781 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
AP001189.6-201ENST00000528781 ZNF516Q92618 1163 aa8.19□□□□□ -1.1
AP001189.6-201ENST00000528781 DPYSL4O14531 572 aa8.18□□□□□ -1.1
AP001189.6-201ENST00000528781 CADPS2Q86UW7 1296 aa8.18□□□□□ -1.1
AP001189.6-201ENST00000528781 DDX12PQ92771 950 aa8.17□□□□□ -1.1
AP001189.6-201ENST00000528781 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
AP001189.6-201ENST00000528781 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
AP001189.6-201ENST00000528781 SMAPO00193 183 aa8.15□□□□□ -1.1
AP001189.6-201ENST00000528781 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
AP001189.6-201ENST00000528781 C3orf80F5H4A9 247 aa8.14□□□□□ -1.11
AP001189.6-201ENST00000528781 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
AP001189.6-201ENST00000528781 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
AP001189.6-201ENST00000528781 PRSS12P56730 875 aa8.13□□□□□ -1.11
AP001189.6-201ENST00000528781 MAP3K7O43318 606 aa8.12□□□□□ -1.11
AP001189.6-201ENST00000528781 APLP1P51693 650 aa8.12□□□□□ -1.11
AP001189.6-201ENST00000528781 NBR1Q14596 966 aa8.11□□□□□ -1.11
AP001189.6-201ENST00000528781 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
AP001189.6-201ENST00000528781 TATDN2Q93075 761 aa8.11□□□□□ -1.11
AP001189.6-201ENST00000528781 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
AP001189.6-201ENST00000528781 GGCXP38435 758 aa8.09□□□□□ -1.11
AP001189.6-201ENST00000528781 CERKQ8TCT0 537 aa8.08□□□□□ -1.12
AP001189.6-201ENST00000528781 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
AP001189.6-201ENST00000528781 MYT1Q01538 1121 aa8.07□□□□□ -1.12
AP001189.6-201ENST00000528781 PDIA6Q15084 440 aa8.07□□□□□ -1.12
AP001189.6-201ENST00000528781 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
AP001189.6-201ENST00000528781 POTECB2RU33 542 aa8.06□□□□□ -1.12
AP001189.6-201ENST00000528781 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
AP001189.6-201ENST00000528781 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
AP001189.6-201ENST00000528781 EMID1Q96A84 441 aaPredicted RBP8.05□□□□□ -1.12
AP001189.6-201ENST00000528781 DGAT1O75907 488 aa8.04□□□□□ -1.12
AP001189.6-201ENST00000528781 COPS2P61201 443 aa8.04□□□□□ -1.12
AP001189.6-201ENST00000528781 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
AP001189.6-201ENST00000528781 RNF40O75150 1001 aa8.03□□□□□ -1.12
AP001189.6-201ENST00000528781 ZPR1O75312 459 aa8.03□□□□□ -1.12
AP001189.6-201ENST00000528781 PKDCCQ504Y2 493 aa8.03□□□□□ -1.12
AP001189.6-201ENST00000528781 NUDT18Q6ZVK8 323 aa8.03□□□□□ -1.12
AP001189.6-201ENST00000528781 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
AP001189.6-201ENST00000528781 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 SLC19A1P41440 591 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 PRR20EP86478 221 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 PRR20CP86479 221 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 PRR20DP86480 221 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 PRR20BP86481 221 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 PRR20AP86496 221 aa8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 RBM27Q9P2N5 1060 aaKnown RBP8.02□□□□□ -1.13
AP001189.6-201ENST00000528781 RNF223E7ERA6 249 aa8.01□□□□□ -1.13
AP001189.6-201ENST00000528781 SPRYD7Q5W111 196 aa8□□□□□ -1.13
AP001189.6-201ENST00000528781 TREML4Q6UXN2 200 aa8□□□□□ -1.13
AP001189.6-201ENST00000528781 SWT1Q5T5J6 900 aaKnown RBP7.99□□□□□ -1.13
AP001189.6-201ENST00000528781 ZNF598Q86UK7 904 aaKnown RBP7.99□□□□□ -1.13
AP001189.6-201ENST00000528781 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
AP001189.6-201ENST00000528781 TTC13Q8NBP0 860 aa7.99□□□□□ -1.13
AP001189.6-201ENST00000528781 CDHR5Q9HBB8 845 aa7.97□□□□□ -1.13
AP001189.6-201ENST00000528781 OSBPP22059 807 aa7.96□□□□□ -1.14
AP001189.6-201ENST00000528781 GDF9O60383 454 aa7.95□□□□□ -1.14
AP001189.6-201ENST00000528781 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
AP001189.6-201ENST00000528781 ANKLE1Q8NAG6 615 aa7.95□□□□□ -1.14
AP001189.6-201ENST00000528781 GRXCR2A6NFK2 248 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms