RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
CPEB4-208ENST00000520867 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
CPEB4-208ENST00000520867 FAM161AQ3B820 660 aa16.27■□□□□ 0.19
CPEB4-208ENST00000520867 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CPEB4-208ENST00000520867 ZBTB9Q96C00 473 aa16.26■□□□□ 0.19
CPEB4-208ENST00000520867 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
CPEB4-208ENST00000520867 APPP05067 770 aa16.24■□□□□ 0.19
CPEB4-208ENST00000520867 MCM4P33991 863 aa16.24■□□□□ 0.19
CPEB4-208ENST00000520867 KCNJ4P48050 445 aa16.24■□□□□ 0.19
CPEB4-208ENST00000520867 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
CPEB4-208ENST00000520867 TRAK2O60296 914 aa16.23■□□□□ 0.19
CPEB4-208ENST00000520867 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
CPEB4-208ENST00000520867 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
CPEB4-208ENST00000520867 IGSF3O75054 1194 aa16.22■□□□□ 0.19
CPEB4-208ENST00000520867 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
CPEB4-208ENST00000520867 GAS2L3Q86XJ1 694 aa16.21■□□□□ 0.19
CPEB4-208ENST00000520867 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
CPEB4-208ENST00000520867 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.18
CPEB4-208ENST00000520867 PPP1R9BQ96SB3 815 aa16.19■□□□□ 0.18
CPEB4-208ENST00000520867 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
CPEB4-208ENST00000520867 USP19O94966 1318 aa16.18■□□□□ 0.18
CPEB4-208ENST00000520867 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
CPEB4-208ENST00000520867 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
CPEB4-208ENST00000520867 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
CPEB4-208ENST00000520867 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
CPEB4-208ENST00000520867 CCDC173Q0VFZ6 552 aa16.17■□□□□ 0.18
CPEB4-208ENST00000520867 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
CPEB4-208ENST00000520867 SENP3-EIF4A1A0A087X0R7 540 aa16.17■□□□□ 0.18
CPEB4-208ENST00000520867 ZNF710Q8N1W2 664 aa16.17■□□□□ 0.18
CPEB4-208ENST00000520867 BECN1Q14457 450 aa16.16■□□□□ 0.18
CPEB4-208ENST00000520867 GEMIN8Q9NWZ8 242 aaKnown RBP16.16■□□□□ 0.18
CPEB4-208ENST00000520867 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
CPEB4-208ENST00000520867 YY1AP1Q9H869 796 aa16.16■□□□□ 0.18
CPEB4-208ENST00000520867 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
CPEB4-208ENST00000520867 SASS6Q6UVJ0 657 aa16.15■□□□□ 0.18
CPEB4-208ENST00000520867 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
CPEB4-208ENST00000520867 CAPN2P17655 700 aa16.15■□□□□ 0.18
CPEB4-208ENST00000520867 KTN1Q86UP2 1357 aaKnown RBP16.15■□□□□ 0.18
CPEB4-208ENST00000520867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
CPEB4-208ENST00000520867 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
CPEB4-208ENST00000520867 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
CPEB4-208ENST00000520867 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
CPEB4-208ENST00000520867 PANK3Q9H999 370 aa16.14■□□□□ 0.17
CPEB4-208ENST00000520867 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
CPEB4-208ENST00000520867 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
CPEB4-208ENST00000520867 RALBP1Q15311 655 aa16.12■□□□□ 0.17
CPEB4-208ENST00000520867 ZNF771Q7L3S4 317 aaPredicted RBP16.12■□□□□ 0.17
CPEB4-208ENST00000520867 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
CPEB4-208ENST00000520867 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
CPEB4-208ENST00000520867 TULP2O00295 520 aa16.11■□□□□ 0.17
CPEB4-208ENST00000520867 MLECQ14165 292 aa16.11■□□□□ 0.17
CPEB4-208ENST00000520867 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
CPEB4-208ENST00000520867 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
CPEB4-208ENST00000520867 EP400NLQ6ZTU2 488 aa16.1■□□□□ 0.17
CPEB4-208ENST00000520867 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
CPEB4-208ENST00000520867 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
CPEB4-208ENST00000520867 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
CPEB4-208ENST00000520867 TSC1Q92574 1164 aa16.09■□□□□ 0.17
CPEB4-208ENST00000520867 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.17
CPEB4-208ENST00000520867 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.17
CPEB4-208ENST00000520867 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.17
CPEB4-208ENST00000520867 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.163e-7■■■□□ 17
CPEB4-208ENST00000520867 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.16
CPEB4-208ENST00000520867 NCOA1Q15788 1441 aa16.07■□□□□ 0.16
CPEB4-208ENST00000520867 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
CPEB4-208ENST00000520867 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
CPEB4-208ENST00000520867 PTMSP20962 102 aa16.06■□□□□ 0.16
CPEB4-208ENST00000520867 CSPP1Q1MSJ5 1256 aa16.06■□□□□ 0.16
CPEB4-208ENST00000520867 KDM5BQ9UGL1 1544 aa16.06■□□□□ 0.16
CPEB4-208ENST00000520867 HS1BP3Q53T59 392 aa16.06■□□□□ 0.16
CPEB4-208ENST00000520867 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
CPEB4-208ENST00000520867 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
CPEB4-208ENST00000520867 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
CPEB4-208ENST00000520867 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
CPEB4-208ENST00000520867 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
CPEB4-208ENST00000520867 EGFL6Q8IUX8 553 aa16.02■□□□□ 0.16
CPEB4-208ENST00000520867 TICAM2Q86XR7 235 aa16.02■□□□□ 0.15
CPEB4-208ENST00000520867 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.15
CPEB4-208ENST00000520867 PLIN1O60240 522 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 SEC24BO95487 1268 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.01■□□□□ 0.15
CPEB4-208ENST00000520867 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
CPEB4-208ENST00000520867 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CPEB4-208ENST00000520867 DDX11L8A8MPP1 907 aa16■□□□□ 0.15
CPEB4-208ENST00000520867 CENPQQ7L2Z9 268 aaPredicted RBP16■□□□□ 0.15
CPEB4-208ENST00000520867 SIRT1Q96EB6 747 aa16■□□□□ 0.15
CPEB4-208ENST00000520867 CCDC66A2RUB6 948 aa16■□□□□ 0.15
CPEB4-208ENST00000520867 PHF14O94880 888 aa15.99■□□□□ 0.15
CPEB4-208ENST00000520867 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
CPEB4-208ENST00000520867 ZKSCAN5Q9Y2L8 839 aa15.99■□□□□ 0.15
CPEB4-208ENST00000520867 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
CPEB4-208ENST00000520867 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
CPEB4-208ENST00000520867 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
CPEB4-208ENST00000520867 SLFN14P0C7P3 912 aa15.98■□□□□ 0.15
CPEB4-208ENST00000520867 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPEB4-208ENST00000520867 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
CPEB4-208ENST00000520867 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.153e-6■■■■□ 26.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms