RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 PCDHGA10Q9Y5H3 936 aa13.82□□□□□ -0.2
UBLCP1-202ENST00000519276 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
UBLCP1-202ENST00000519276 COL9A1P20849 921 aa13.81□□□□□ -0.2
UBLCP1-202ENST00000519276 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
UBLCP1-202ENST00000519276 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
UBLCP1-202ENST00000519276 NKX1-1Q15270 411 aaPredicted RBP13.79□□□□□ -0.2
UBLCP1-202ENST00000519276 KIAA1468Q9P260 1216 aa13.78□□□□□ -0.2
UBLCP1-202ENST00000519276 TYW1BQ6NUM6 668 aa13.77□□□□□ -0.21
UBLCP1-202ENST00000519276 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
UBLCP1-202ENST00000519276 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
UBLCP1-202ENST00000519276 LCE2BO14633 110 aa13.74□□□□□ -0.21
UBLCP1-202ENST00000519276 GFRA3O60609 400 aa13.74□□□□□ -0.21
UBLCP1-202ENST00000519276 PHF14O94880 888 aa13.74□□□□□ -0.21
UBLCP1-202ENST00000519276 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
UBLCP1-202ENST00000519276 MFSD10Q14728 455 aa13.71□□□□□ -0.21
UBLCP1-202ENST00000519276 TSR3Q9UJK0 312 aaKnown RBP13.71□□□□□ -0.21
UBLCP1-202ENST00000519276 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
UBLCP1-202ENST00000519276 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
UBLCP1-202ENST00000519276 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.68□□□□□ -0.22
UBLCP1-202ENST00000519276 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
UBLCP1-202ENST00000519276 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
UBLCP1-202ENST00000519276 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
UBLCP1-202ENST00000519276 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
UBLCP1-202ENST00000519276 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
UBLCP1-202ENST00000519276 EPAS1Q99814 870 aa13.65□□□□□ -0.22
UBLCP1-202ENST00000519276 NRG2O14511 850 aaPredicted RBP13.64□□□□□ -0.23
UBLCP1-202ENST00000519276 PRKD2Q9BZL6 878 aa13.59□□□□□ -0.23
UBLCP1-202ENST00000519276 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
UBLCP1-202ENST00000519276 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
UBLCP1-202ENST00000519276 PPP4CP60510 307 aa13.55□□□□□ -0.24
UBLCP1-202ENST00000519276 TJAP1Q5JTD0 557 aa13.54□□□□□ -0.24
UBLCP1-202ENST00000519276 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
UBLCP1-202ENST00000519276 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
UBLCP1-202ENST00000519276 IL21Q9HBE4 155 aa13.49□□□□□ -0.25
UBLCP1-202ENST00000519276 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
UBLCP1-202ENST00000519276 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
UBLCP1-202ENST00000519276 MTRQ99707 1265 aa13.45□□□□□ -0.26
UBLCP1-202ENST00000519276 TSKSQ9UJT2 592 aa13.45□□□□□ -0.26
UBLCP1-202ENST00000519276 CAMK2BQ13554 666 aa13.45□□□□□ -0.26
UBLCP1-202ENST00000519276 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
UBLCP1-202ENST00000519276 ZNF775Q96BV0 537 aaPredicted RBP13.42□□□□□ -0.26
UBLCP1-202ENST00000519276 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
UBLCP1-202ENST00000519276 DPYSL4O14531 572 aa13.41□□□□□ -0.26
UBLCP1-202ENST00000519276 SAMD7Q7Z3H4 446 aa13.41□□□□□ -0.26
UBLCP1-202ENST00000519276 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
UBLCP1-202ENST00000519276 DDX12PQ92771 950 aa13.39□□□□□ -0.27
UBLCP1-202ENST00000519276 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
UBLCP1-202ENST00000519276 MAP3K7O43318 606 aa13.35□□□□□ -0.27
UBLCP1-202ENST00000519276 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
UBLCP1-202ENST00000519276 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
UBLCP1-202ENST00000519276 NBR1Q14596 966 aa13.33□□□□□ -0.28
UBLCP1-202ENST00000519276 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
UBLCP1-202ENST00000519276 GGCXP38435 758 aa13.32□□□□□ -0.28
UBLCP1-202ENST00000519276 SMAPO00193 183 aa13.32□□□□□ -0.28
UBLCP1-202ENST00000519276 PRSS12P56730 875 aa13.32□□□□□ -0.28
UBLCP1-202ENST00000519276 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
UBLCP1-202ENST00000519276 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
UBLCP1-202ENST00000519276 TATDN2Q93075 761 aa13.29□□□□□ -0.28
UBLCP1-202ENST00000519276 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
UBLCP1-202ENST00000519276 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
UBLCP1-202ENST00000519276 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
UBLCP1-202ENST00000519276 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
UBLCP1-202ENST00000519276 APLP1P51693 650 aa13.27□□□□□ -0.29
UBLCP1-202ENST00000519276 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
UBLCP1-202ENST00000519276 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
UBLCP1-202ENST00000519276 PDIA6Q15084 440 aa13.24□□□□□ -0.29
UBLCP1-202ENST00000519276 RNF40O75150 1001 aa13.22□□□□□ -0.29
UBLCP1-202ENST00000519276 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
UBLCP1-202ENST00000519276 C3orf80F5H4A9 247 aa13.21□□□□□ -0.29
UBLCP1-202ENST00000519276 DGAT1O75907 488 aa13.18□□□□□ -0.3
UBLCP1-202ENST00000519276 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
UBLCP1-202ENST00000519276 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
UBLCP1-202ENST00000519276 COPS2P61201 443 aa13.16□□□□□ -0.3
UBLCP1-202ENST00000519276 NUDT18Q6ZVK8 323 aa13.16□□□□□ -0.3
UBLCP1-202ENST00000519276 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
UBLCP1-202ENST00000519276 MYT1Q01538 1121 aa13.15□□□□□ -0.3
UBLCP1-202ENST00000519276 ZPR1O75312 459 aa13.15□□□□□ -0.3
UBLCP1-202ENST00000519276 SLC19A1P41440 591 aa13.15□□□□□ -0.3
UBLCP1-202ENST00000519276 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
UBLCP1-202ENST00000519276 PRR20EP86478 221 aa13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 PRR20CP86479 221 aa13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 PRR20DP86480 221 aa13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 PRR20BP86481 221 aa13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 PRR20AP86496 221 aa13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
UBLCP1-202ENST00000519276 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
UBLCP1-202ENST00000519276 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
UBLCP1-202ENST00000519276 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
UBLCP1-202ENST00000519276 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
UBLCP1-202ENST00000519276 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
UBLCP1-202ENST00000519276 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
UBLCP1-202ENST00000519276 POTECB2RU33 542 aa13.07□□□□□ -0.32
UBLCP1-202ENST00000519276 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
UBLCP1-202ENST00000519276 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
UBLCP1-202ENST00000519276 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
UBLCP1-202ENST00000519276 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
UBLCP1-202ENST00000519276 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
UBLCP1-202ENST00000519276 PCDHB3Q9Y5E6 796 aa13.04□□□□□ -0.32
UBLCP1-202ENST00000519276 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
UBLCP1-202ENST00000519276 LCE2AQ5TA79 106 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms