RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 EFCAB3Q8N7B9 438 aa2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 ANKK1Q8NFD2 765 aa2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 MS4A4AQ96JQ5 239 aa2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 C2orf72A6NCS6 295 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 ADAM23O75077 832 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 PRR20EP86478 221 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 PRR20CP86479 221 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 PRR20DP86480 221 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 PRR20BP86481 221 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 PRR20AP86496 221 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 TJAP1Q5JTD0 557 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 EMID1Q96A84 441 aaPredicted RBP2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 KCNH8Q96L42 1107 aa2.74□□□□□ -1.97
RNU6-542P-201ENST00000516405 GPAT2Q6NUI2 795 aa2.73□□□□□ -1.97
RNU6-542P-201ENST00000516405 SNRPBP14678 240 aaKnown RBP2.72□□□□□ -1.97
RNU6-542P-201ENST00000516405 CRIPAKQ8N1N5 446 aa2.72□□□□□ -1.97
RNU6-542P-201ENST00000516405 NBPF3Q9H094 633 aa2.72□□□□□ -1.97
RNU6-542P-201ENST00000516405 CHRM1P11229 460 aaPredicted RBP2.71□□□□□ -1.98
RNU6-542P-201ENST00000516405 BCL2L12Q9HB09 334 aa2.7□□□□□ -1.98
RNU6-542P-201ENST00000516405 TNFRSF10AO00220 468 aa2.69□□□□□ -1.98
RNU6-542P-201ENST00000516405 GDF9O60383 454 aa2.69□□□□□ -1.98
RNU6-542P-201ENST00000516405 IGHA1P01876 353 aa2.69□□□□□ -1.98
RNU6-542P-201ENST00000516405 ZNF516Q92618 1163 aa2.68□□□□□ -1.98
RNU6-542P-201ENST00000516405 SPRYD7Q5W111 196 aa2.67□□□□□ -1.98
RNU6-542P-201ENST00000516405 ZNF598Q86UK7 904 aaKnown RBP2.67□□□□□ -1.98
RNU6-542P-201ENST00000516405 NKX2-3Q8TAU0 364 aa2.67□□□□□ -1.98
RNU6-542P-201ENST00000516405 PTCD2Q8WV60 388 aaKnown RBP2.67□□□□□ -1.98
RNU6-542P-201ENST00000516405 ZFRQ96KR1 1074 aaKnown RBP2.67□□□□□ -1.98
RNU6-542P-201ENST00000516405 AVPP01185 164 aa2.66□□□□□ -1.98
RNU6-542P-201ENST00000516405 SLC19A1P41440 591 aa2.66□□□□□ -1.98
RNU6-542P-201ENST00000516405 KRTAP4-5Q9BYR2 181 aa2.66□□□□□ -1.98
RNU6-542P-201ENST00000516405 TSR3Q9UJK0 312 aaKnown RBP2.66□□□□□ -1.98
RNU6-542P-201ENST00000516405 ERBB4Q15303 1308 aa2.66□□□□□ -1.98
RNU6-542P-201ENST00000516405 ARID1BQ8NFD5 2236 aaPredicted RBP2.65□□□□□ -1.98
RNU6-542P-201ENST00000516405 AXIN1O15169 862 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 PTPREP23469 700 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 SLC16A10Q8TF71 515 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 MTRQ99707 1265 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 RABGEF1Q9UJ41 708 aa2.65□□□□□ -1.99
RNU6-542P-201ENST00000516405 IRF7Q92985 503 aa2.64□□□□□ -1.99
RNU6-542P-201ENST00000516405 PHF8Q9UPP1 1060 aa2.64□□□□□ -1.99
RNU6-542P-201ENST00000516405 HPS5Q9UPZ3 1129 aa2.64□□□□□ -1.99
RNU6-542P-201ENST00000516405 DNMT3AQ9Y6K1 912 aaPredicted RBP2.64□□□□□ -1.99
RNU6-542P-201ENST00000516405 PROX2Q3B8N5 592 aa2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 LAPTM4BQ86VI4 370 aa2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 TRIM47Q96LD4 638 aa2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 IL21Q9HBE4 155 aa2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 GOLGA2P5Q9HBQ8 144 aa2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 NXF1Q9UBU9 619 aaKnown RBP2.63□□□□□ -1.99
RNU6-542P-201ENST00000516405 VEGFBP49765 207 aa2.62□□□□□ -1.99
RNU6-542P-201ENST00000516405 ZNF697Q5TEC3 545 aa2.62□□□□□ -1.99
RNU6-542P-201ENST00000516405 ZNF454Q8N9F8 522 aa2.62□□□□□ -1.99
RNU6-542P-201ENST00000516405 SOX12O15370 315 aa2.61□□□□□ -1.99
RNU6-542P-201ENST00000516405 SMCPP49901 116 aaPredicted RBP2.61□□□□□ -1.99
RNU6-542P-201ENST00000516405 LIAT1Q6ZQX7 453 aa2.61□□□□□ -1.99
RNU6-542P-201ENST00000516405 TMUB1Q9BVT8 246 aa2.61□□□□□ -1.99
RNU6-542P-201ENST00000516405 GSE1Q14687 1217 aa2.6□□□□□ -1.99
RNU6-542P-201ENST00000516405 CTC1Q2NKJ3 1217 aa2.6□□□□□ -1.99
RNU6-542P-201ENST00000516405 ATP13A2Q9NQ11 1180 aa2.6□□□□□ -1.99
RNU6-542P-201ENST00000516405 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.6□□□□□ -1.99
RNU6-542P-201ENST00000516405 RNF223E7ERA6 249 aa2.59□□□□□ -1.99
RNU6-542P-201ENST00000516405 H3BM21 787 aa2.59□□□□□ -1.99
RNU6-542P-201ENST00000516405 FOXK2Q01167 660 aa2.59□□□□□ -1.99
RNU6-542P-201ENST00000516405 PKD2L1Q9P0L9 805 aa2.59□□□□□ -1.99
RNU6-542P-201ENST00000516405 RNF225M0QZC1 329 aaPredicted RBP2.58□□□□□ -2
RNU6-542P-201ENST00000516405 GGCXP38435 758 aa2.58□□□□□ -2
RNU6-542P-201ENST00000516405 FOSBP53539 338 aa2.58□□□□□ -2
RNU6-542P-201ENST00000516405 LAMC2Q13753 1193 aa2.58□□□□□ -2
RNU6-542P-201ENST00000516405 ADAM33Q9BZ11 813 aa2.58□□□□□ -2
RNU6-542P-201ENST00000516405 SEPT9Q9UHD8 586 aaPredicted RBP2.58□□□□□ -2
RNU6-542P-201ENST00000516405 ADAMTS8Q9UP79 889 aa2.58□□□□□ -2
RNU6-542P-201ENST00000516405 ITGB2P05107 769 aa2.57□□□□□ -2
RNU6-542P-201ENST00000516405 NPAS3Q8IXF0 933 aa2.57□□□□□ -2
RNU6-542P-201ENST00000516405 LRCH3Q96II8 777 aa2.57□□□□□ -2
RNU6-542P-201ENST00000516405 TOR4AQ9NXH8 423 aa2.57□□□□□ -2
RNU6-542P-201ENST00000516405 COL9A1P20849 921 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 IRS1P35568 1242 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 PPP4CP60510 307 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 SPOCK3Q9BQ16 436 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 SENP2Q9HC62 589 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 KIAA1468Q9P260 1216 aa2.56□□□□□ -2
RNU6-542P-201ENST00000516405 K7ELQ4 463 aaPredicted RBP2.55□□□□□ -2
RNU6-542P-201ENST00000516405 MSTNO14793 375 aa2.55□□□□□ -2
RNU6-542P-201ENST00000516405 TMC2Q8TDI7 906 aa2.55□□□□□ -2
RNU6-542P-201ENST00000516405 PPP1R3GB7ZBB8 358 aa2.54□□□□□ -2
RNU6-542P-201ENST00000516405 PPEF1O14829 653 aaPredicted RBP2.54□□□□□ -2
RNU6-542P-201ENST00000516405 PROCP04070 461 aa2.54□□□□□ -2
RNU6-542P-201ENST00000516405 FOXC1Q12948 553 aa2.54□□□□□ -2
RNU6-542P-201ENST00000516405 FBXO22Q8NEZ5 403 aa2.54□□□□□ -2
RNU6-542P-201ENST00000516405 TBC1D12O60347 775 aa2.53□□□□□ -2
RNU6-542P-201ENST00000516405 COBLO75128 1261 aa2.53□□□□□ -2
RNU6-542P-201ENST00000516405 FAM98CQ17RN3 349 aaKnown RBP2.53□□□□□ -2
RNU6-542P-201ENST00000516405 PLA2G4EQ3MJ16 856 aa2.52□□□□□ -2.01
RNU6-542P-201ENST00000516405 ZDHHC16Q969W1 377 aa2.52□□□□□ -2.01
RNU6-542P-201ENST00000516405 KIFC2Q96AC6 838 aa2.52□□□□□ -2.01
RNU6-542P-201ENST00000516405 ANKLE1Q8NAG6 615 aa2.51□□□□□ -2.01
RNU6-542P-201ENST00000516405 APLP1P51693 650 aa2.5□□□□□ -2.01
RNU6-542P-201ENST00000516405 COPS2P61201 443 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms