RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 SNPHO15079 494 aa3.77□□□□□ -1.81
AC025539.1-201ENST00000515343 GNPATO15228 680 aa3.77□□□□□ -1.81
AC025539.1-201ENST00000515343 PCDHGA10Q9Y5H3 936 aa3.77□□□□□ -1.81
AC025539.1-201ENST00000515343 ZNF316A6NFI3 1004 aaPredicted RBP3.76□□□□□ -1.81
AC025539.1-201ENST00000515343 SLAIN1Q8ND83 568 aa3.76□□□□□ -1.81
AC025539.1-201ENST00000515343 SLC24A3Q9HC58 644 aa3.75□□□□□ -1.81
AC025539.1-201ENST00000515343 BCL2L12Q9HB09 334 aa3.75□□□□□ -1.81
AC025539.1-201ENST00000515343 GJA5P36382 358 aa3.75□□□□□ -1.81
AC025539.1-201ENST00000515343 RIMBP2O15034 1052 aa3.74□□□□□ -1.81
AC025539.1-201ENST00000515343 PDE4DQ08499 809 aa3.74□□□□□ -1.81
AC025539.1-201ENST00000515343 ZDHHC16Q969W1 377 aa3.73□□□□□ -1.81
AC025539.1-201ENST00000515343 EYA1Q99502 592 aa3.73□□□□□ -1.81
AC025539.1-201ENST00000515343 OATP04181 439 aa3.73□□□□□ -1.81
AC025539.1-201ENST00000515343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.72□□□□□ -1.81
AC025539.1-201ENST00000515343 ADGRG1Q9Y653 693 aa3.72□□□□□ -1.81
AC025539.1-201ENST00000515343 PBX2P40425 430 aa3.72□□□□□ -1.81
AC025539.1-201ENST00000515343 CCDC102AQ96A19 550 aa3.72□□□□□ -1.81
AC025539.1-201ENST00000515343 PRSS12P56730 875 aa3.71□□□□□ -1.82
AC025539.1-201ENST00000515343 C6orf132Q5T0Z8 1188 aa3.71□□□□□ -1.82
AC025539.1-201ENST00000515343 PPP1R3GB7ZBB8 358 aa3.71□□□□□ -1.82
AC025539.1-201ENST00000515343 DDRGK1Q96HY6 314 aa3.71□□□□□ -1.82
AC025539.1-201ENST00000515343 KDM4CQ9H3R0 1056 aa3.71□□□□□ -1.82
AC025539.1-201ENST00000515343 PLEKHG3A1L390 1219 aa3.7□□□□□ -1.82
AC025539.1-201ENST00000515343 PPP4R3BQ5MIZ7 849 aa3.7□□□□□ -1.82
AC025539.1-201ENST00000515343 PXYLP1Q8TE99 480 aa3.7□□□□□ -1.82
AC025539.1-201ENST00000515343 SH3D19Q5HYK7 790 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 GTF3C3Q9Y5Q9 886 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 TK2O00142 265 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 LAPTM4BQ86VI4 370 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 PARP9Q8IXQ6 854 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 IGSF5Q9NSI5 407 aa3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
AC025539.1-201ENST00000515343 BHMG1C9JSJ3 638 aaPredicted RBP3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 ADAM33Q9BZ11 813 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 CLCN1P35523 988 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 CDHR5Q9HBB8 845 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 LHX6Q9UPM6 363 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 GRXCR2A6NFK2 248 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 ARSIQ5FYB1 569 aa3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 METTL3Q86U44 580 aaKnown RBP3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 FAM217BQ9NTX9 383 aaPredicted RBP3.68□□□□□ -1.82
AC025539.1-201ENST00000515343 FECHP22830 423 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 GPCPD1Q9NPB8 672 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 TRIM6-TRIM34B2RNG4 842 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 DDX12PQ92771 950 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 PPP2R2DQ66LE6 453 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 ZNF687Q8N1G0 1237 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 UPF1Q92900 1129 aaKnown RBP eCLIP3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 PHOX2BQ99453 314 aa3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 FAM163AQ96GL9 167 aaPredicted RBP3.67□□□□□ -1.82
AC025539.1-201ENST00000515343 TSR1Q2NL82 804 aaKnown RBP3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 CDAN1Q8IWY9 1227 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 ZBED2Q9BTP6 218 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 COL9A1P20849 921 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 DIXDC1Q155Q3 683 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 PTPREP23469 700 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 BANK1Q8NDB2 785 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 KHSRPQ92945 711 aaKnown RBP eCLIP3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 FAM198AQ9UFP1 575 aa3.66□□□□□ -1.82
AC025539.1-201ENST00000515343 SKIV2LQ15477 1246 aaKnown RBP3.65□□□□□ -1.82
AC025539.1-201ENST00000515343 CDCA7LQ96GN5 454 aa3.65□□□□□ -1.82
AC025539.1-201ENST00000515343 MS4A1P11836 297 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 PADI6Q6TGC4 694 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 NUTM2FA1L443 756 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 ARHGAP33O14559 1287 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 CD46P15529 392 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 NEUROD2Q15784 382 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 KRI1Q8N9T8 703 aaKnown RBP3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 REPIN1Q9BWE0 567 aaKnown RBP3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 RSPH6AQ9H0K4 717 aa3.65□□□□□ -1.83
AC025539.1-201ENST00000515343 NUDT7P0C024 238 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 RBM46Q8TBY0 533 aaKnown RBP3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 GIGYF2Q6Y7W6 1299 aaKnown RBP3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 TMEM134Q9H6X4 195 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 POTEEQ6S8J3 1075 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 ZNF454Q8N9F8 522 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 RABGEF1Q9UJ41 708 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 TSKSQ9UJT2 592 aa3.64□□□□□ -1.83
AC025539.1-201ENST00000515343 MAP3K7O43318 606 aa3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 PRPF38BQ5VTL8 546 aaKnown RBP3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 NBPF26B4DH59 902 aa3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 HRO43593 1189 aa3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 SPTLC1O15269 473 aa3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 DNAJB2P25686 324 aa3.63□□□□□ -1.83
AC025539.1-201ENST00000515343 FAM117AQ9C073 453 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 A6NJR5 290 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 PACS2Q86VP3 889 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 TATDN2Q93075 761 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 USP46P62068 366 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 FLIIQ13045 1269 aa3.62□□□□□ -1.83
AC025539.1-201ENST00000515343 ZNF710Q8N1W2 664 aa3.61□□□□□ -1.83
AC025539.1-201ENST00000515343 ST18O60284 1047 aa3.61□□□□□ -1.83
AC025539.1-201ENST00000515343 NECTIN2Q92692 538 aa3.61□□□□□ -1.83
AC025539.1-201ENST00000515343 VPS9D1Q9Y2B5 631 aa3.61□□□□□ -1.83
AC025539.1-201ENST00000515343 SSTR3P32745 418 aaPredicted RBP3.61□□□□□ -1.83
AC025539.1-201ENST00000515343 MMRN1Q13201 1228 aa3.6□□□□□ -1.83
AC025539.1-201ENST00000515343 GPBP1L1Q9HC44 474 aaPredicted RBP3.6□□□□□ -1.83
AC025539.1-201ENST00000515343 SULF1Q8IWU6 871 aa3.6□□□□□ -1.83
AC025539.1-201ENST00000515343 SALL2Q9Y467 1007 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms