RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
XRCC4-204ENST00000509268 ZFRQ96KR1 1074 aaKnown RBP8.59□□□□□ -1.03
XRCC4-204ENST00000509268 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
XRCC4-204ENST00000509268 COL9A1P20849 921 aa8.57□□□□□ -1.04
XRCC4-204ENST00000509268 NKX1-1Q15270 411 aaPredicted RBP8.57□□□□□ -1.04
XRCC4-204ENST00000509268 TYW1BQ6NUM6 668 aa8.57□□□□□ -1.04
XRCC4-204ENST00000509268 KIAA1468Q9P260 1216 aa8.57□□□□□ -1.04
XRCC4-204ENST00000509268 PHF14O94880 888 aa8.56□□□□□ -1.04
XRCC4-204ENST00000509268 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
XRCC4-204ENST00000509268 DDX27Q96GQ7 796 aaKnown RBP8.56□□□□□ -1.04
XRCC4-204ENST00000509268 WBP1LQ9NX94 342 aa8.56□□□□□ -1.04
XRCC4-204ENST00000509268 LARP6Q9BRS8 491 aaKnown RBP8.55□□□□□ -1.04
XRCC4-204ENST00000509268 GFRA3O60609 400 aa8.54□□□□□ -1.04
XRCC4-204ENST00000509268 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
XRCC4-204ENST00000509268 MFSD10Q14728 455 aa8.53□□□□□ -1.04
XRCC4-204ENST00000509268 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
XRCC4-204ENST00000509268 EPAS1Q99814 870 aa8.52□□□□□ -1.05
XRCC4-204ENST00000509268 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.51□□□□□ -1.05
XRCC4-204ENST00000509268 C6orf132Q5T0Z8 1188 aa8.5□□□□□ -1.05
XRCC4-204ENST00000509268 LRCH3Q96II8 777 aa8.5□□□□□ -1.05
XRCC4-204ENST00000509268 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
XRCC4-204ENST00000509268 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
XRCC4-204ENST00000509268 NRG2O14511 850 aaPredicted RBP8.49□□□□□ -1.05
XRCC4-204ENST00000509268 LCE2BO14633 110 aa8.49□□□□□ -1.05
XRCC4-204ENST00000509268 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
XRCC4-204ENST00000509268 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
XRCC4-204ENST00000509268 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
XRCC4-204ENST00000509268 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
XRCC4-204ENST00000509268 PPP4CP60510 307 aa8.44□□□□□ -1.06
XRCC4-204ENST00000509268 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
XRCC4-204ENST00000509268 GTPBP6O43824 516 aaPredicted RBP8.43□□□□□ -1.06
XRCC4-204ENST00000509268 TJAP1Q5JTD0 557 aa8.42□□□□□ -1.06
XRCC4-204ENST00000509268 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
XRCC4-204ENST00000509268 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
XRCC4-204ENST00000509268 CAMK2BQ13554 666 aa8.38□□□□□ -1.07
XRCC4-204ENST00000509268 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
XRCC4-204ENST00000509268 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
XRCC4-204ENST00000509268 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.36□□□□□ -1.07
XRCC4-204ENST00000509268 MTRQ99707 1265 aa8.35□□□□□ -1.07
XRCC4-204ENST00000509268 TSKSQ9UJT2 592 aa8.35□□□□□ -1.07
XRCC4-204ENST00000509268 PDZRN3Q9UPQ7 1066 aa8.34□□□□□ -1.07
XRCC4-204ENST00000509268 SAMD7Q7Z3H4 446 aa8.33□□□□□ -1.08
XRCC4-204ENST00000509268 DPYSL4O14531 572 aa8.32□□□□□ -1.08
XRCC4-204ENST00000509268 EN1Q05925 392 aaPredicted RBP8.32□□□□□ -1.08
XRCC4-204ENST00000509268 GGCXP38435 758 aa8.31□□□□□ -1.08
XRCC4-204ENST00000509268 ZNF775Q96BV0 537 aaPredicted RBP8.31□□□□□ -1.08
XRCC4-204ENST00000509268 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
XRCC4-204ENST00000509268 DDX12PQ92771 950 aa8.31□□□□□ -1.08
XRCC4-204ENST00000509268 MAP3K7O43318 606 aa8.3□□□□□ -1.08
XRCC4-204ENST00000509268 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
XRCC4-204ENST00000509268 PRSS12P56730 875 aa8.3□□□□□ -1.08
XRCC4-204ENST00000509268 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
XRCC4-204ENST00000509268 CDCA7LQ96GN5 454 aa8.3□□□□□ -1.08
XRCC4-204ENST00000509268 CADPS2Q86UW7 1296 aa8.29□□□□□ -1.08
XRCC4-204ENST00000509268 TMUB1Q9BVT8 246 aa8.29□□□□□ -1.08
XRCC4-204ENST00000509268 NBR1Q14596 966 aa8.28□□□□□ -1.08
XRCC4-204ENST00000509268 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
XRCC4-204ENST00000509268 NBPF26B4DH59 902 aa8.27□□□□□ -1.09
XRCC4-204ENST00000509268 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
XRCC4-204ENST00000509268 TATDN2Q93075 761 aa8.27□□□□□ -1.09
XRCC4-204ENST00000509268 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
XRCC4-204ENST00000509268 SMAPO00193 183 aa8.26□□□□□ -1.09
XRCC4-204ENST00000509268 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
XRCC4-204ENST00000509268 APLP1P51693 650 aa8.23□□□□□ -1.09
XRCC4-204ENST00000509268 PDIA6Q15084 440 aa8.23□□□□□ -1.09
XRCC4-204ENST00000509268 FAM198AQ9UFP1 575 aa8.23□□□□□ -1.09
XRCC4-204ENST00000509268 NKX2-3Q8TAU0 364 aa8.22□□□□□ -1.09
XRCC4-204ENST00000509268 DGAT1O75907 488 aa8.22□□□□□ -1.09
XRCC4-204ENST00000509268 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
XRCC4-204ENST00000509268 RNF40O75150 1001 aa8.19□□□□□ -1.1
XRCC4-204ENST00000509268 PKDCCQ504Y2 493 aa8.19□□□□□ -1.1
XRCC4-204ENST00000509268 SLF2Q8IX21 1173 aa8.19□□□□□ -1.1
XRCC4-204ENST00000509268 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 SLC19A1P41440 591 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 ZPR1O75312 459 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 MYT1Q01538 1121 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 TRIM67Q6ZTA4 783 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 PRR14Q9BWN1 585 aa8.18□□□□□ -1.1
XRCC4-204ENST00000509268 COPS2P61201 443 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 PRR20EP86478 221 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 PRR20CP86479 221 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 PRR20DP86480 221 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 PRR20BP86481 221 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 PRR20AP86496 221 aa8.17□□□□□ -1.1
XRCC4-204ENST00000509268 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
XRCC4-204ENST00000509268 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
XRCC4-204ENST00000509268 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
XRCC4-204ENST00000509268 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
XRCC4-204ENST00000509268 TREML4Q6UXN2 200 aa8.13□□□□□ -1.11
XRCC4-204ENST00000509268 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
XRCC4-204ENST00000509268 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
XRCC4-204ENST00000509268 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
XRCC4-204ENST00000509268 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
XRCC4-204ENST00000509268 ANKLE1Q8NAG6 615 aa8.11□□□□□ -1.11
XRCC4-204ENST00000509268 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
XRCC4-204ENST00000509268 POTECB2RU33 542 aa8.1□□□□□ -1.11
XRCC4-204ENST00000509268 OSBPP22059 807 aa8.1□□□□□ -1.11
XRCC4-204ENST00000509268 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms