RNA–Protein interactions for RNA: ENST00000504644.1

RAB28-204, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 405 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-204ENST00000504644 CCDC181Q5TID7 509 aa9.15□□□□□ -0.94
RAB28-204ENST00000504644 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.94
RAB28-204ENST00000504644 CASC1Q6TDU7 716 aa9.14□□□□□ -0.95
RAB28-204ENST00000504644 APBB1IPQ7Z5R6 666 aaPredicted RBP9.14□□□□□ -0.95
RAB28-204ENST00000504644 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
RAB28-204ENST00000504644 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
RAB28-204ENST00000504644 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
RAB28-204ENST00000504644 MYBPC2Q14324 1141 aa9.13□□□□□ -0.95
RAB28-204ENST00000504644 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
RAB28-204ENST00000504644 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
RAB28-204ENST00000504644 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
RAB28-204ENST00000504644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
RAB28-204ENST00000504644 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 RBM47A0AV96 593 aaKnown RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 LIG1P18858 919 aa9.12□□□□□ -0.95
RAB28-204ENST00000504644 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
RAB28-204ENST00000504644 TTC36A6NLP5 189 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 RIOK3O14730 519 aaKnown RBP9.11□□□□□ -0.95
RAB28-204ENST00000504644 ANP32CO43423 234 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 NRDCO43847 1150 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
RAB28-204ENST00000504644 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
RAB28-204ENST00000504644 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
RAB28-204ENST00000504644 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
RAB28-204ENST00000504644 UBXN4Q92575 508 aa9.1□□□□□ -0.95
RAB28-204ENST00000504644 MTA3Q9BTC8 594 aa9.1□□□□□ -0.95
RAB28-204ENST00000504644 CHMP4BQ9H444 224 aaKnown RBP9.1□□□□□ -0.95
RAB28-204ENST00000504644 METTL14Q9HCE5 456 aaKnown RBP9.1□□□□□ -0.95
RAB28-204ENST00000504644 KRBA2Q6ZNG9 492 aa9.09□□□□□ -0.95
RAB28-204ENST00000504644 NBPF11Q86T75 865 aa9.09□□□□□ -0.95
RAB28-204ENST00000504644 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
RAB28-204ENST00000504644 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
RAB28-204ENST00000504644 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
RAB28-204ENST00000504644 CEP120Q8N960 986 aa9.08□□□□□ -0.96
RAB28-204ENST00000504644 TRIM44Q96DX7 344 aaPredicted RBP9.08□□□□□ -0.96
RAB28-204ENST00000504644 SIRT1Q96EB6 747 aa9.08□□□□□ -0.96
RAB28-204ENST00000504644 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
RAB28-204ENST00000504644 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
RAB28-204ENST00000504644 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
RAB28-204ENST00000504644 MMP14P50281 582 aa9.07□□□□□ -0.96
RAB28-204ENST00000504644 POLA2Q14181 598 aa9.07□□□□□ -0.96
RAB28-204ENST00000504644 NBPF1Q3BBV0 1214 aa9.07□□□□□ -0.96
RAB28-204ENST00000504644 SND1Q7KZF4 910 aaKnown RBP eCLIP9.07□□□□□ -0.96
RAB28-204ENST00000504644 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
RAB28-204ENST00000504644 SDR16C5Q8N3Y7 309 aa9.06□□□□□ -0.96
RAB28-204ENST00000504644 JADE2Q9NQC1 790 aa9.06□□□□□ -0.96
RAB28-204ENST00000504644 TRIM41Q8WV44 630 aa9.05□□□□□ -0.96
RAB28-204ENST00000504644 EXOC5O00471 708 aa9.04□□□□□ -0.96
RAB28-204ENST00000504644 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
RAB28-204ENST00000504644 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
RAB28-204ENST00000504644 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
RAB28-204ENST00000504644 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96
RAB28-204ENST00000504644 CACTIN-AS1Q8N1I8 211 aa9.03□□□□□ -0.96
RAB28-204ENST00000504644 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
RAB28-204ENST00000504644 SH3BP5O60239 455 aa9.01□□□□□ -0.97
RAB28-204ENST00000504644 SETDB1Q15047 1291 aa9.01□□□□□ -0.97
RAB28-204ENST00000504644 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
RAB28-204ENST00000504644 MRRFQ96E11 262 aaKnown RBP9.01□□□□□ -0.97
RAB28-204ENST00000504644 NUB1Q9Y5A7 615 aa9.01□□□□□ -0.97
RAB28-204ENST00000504644 CCER2I3L3R5 266 aa9□□□□□ -0.97
RAB28-204ENST00000504644 CREB3O43889 395 aa9□□□□□ -0.97
RAB28-204ENST00000504644 PDE4DQ08499 809 aa9□□□□□ -0.97
RAB28-204ENST00000504644 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
RAB28-204ENST00000504644 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
RAB28-204ENST00000504644 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
RAB28-204ENST00000504644 KIAA1522Q9P206 1035 aaPredicted RBP9□□□□□ -0.97
RAB28-204ENST00000504644 PPFIA4O75335 1185 aa8.99□□□□□ -0.97
RAB28-204ENST00000504644 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
RAB28-204ENST00000504644 CXorf38Q8TB03 319 aa8.99□□□□□ -0.97
RAB28-204ENST00000504644 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
RAB28-204ENST00000504644 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
RAB28-204ENST00000504644 FOXD4Q12950 439 aaPredicted RBP8.98□□□□□ -0.97
RAB28-204ENST00000504644 MAF1Q9H063 256 aa8.98□□□□□ -0.97
RAB28-204ENST00000504644 ATF5Q9Y2D1 282 aaPredicted RBP8.98□□□□□ -0.97
RAB28-204ENST00000504644 GOLIM4O00461 696 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 PEX14O75381 377 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 KRI1Q8N9T8 703 aaKnown RBP8.97□□□□□ -0.97
RAB28-204ENST00000504644 MKL1Q969V6 931 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 FAM117AQ9C073 453 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 USTQ9Y2C2 406 aa8.97□□□□□ -0.97
RAB28-204ENST00000504644 ZC3H6P61129 1189 aaKnown RBP8.96□□□□□ -0.98
RAB28-204ENST00000504644 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.98
RAB28-204ENST00000504644 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
RAB28-204ENST00000504644 PIP4P2Q8N4L2 257 aa8.96□□□□□ -0.98
RAB28-204ENST00000504644 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.96□□□□□ -0.98
RAB28-204ENST00000504644 AKT1S1Q96B36 256 aa8.96□□□□□ -0.98
RAB28-204ENST00000504644 FEZ2Q9UHY8 353 aaPredicted RBP8.96□□□□□ -0.98
RAB28-204ENST00000504644 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
RAB28-204ENST00000504644 RPS6KL1Q9Y6S9 549 aa8.96□□□□□ -0.98
RAB28-204ENST00000504644 TRIM66O15016 1216 aa8.95□□□□□ -0.98
RAB28-204ENST00000504644 MAP4K4O95819 1239 aaPredicted RBP8.95□□□□□ -0.98
RAB28-204ENST00000504644 MCM6Q14566 821 aa8.95□□□□□ -0.98
RAB28-204ENST00000504644 CCDC96Q2M329 555 aa8.95□□□□□ -0.98
RAB28-204ENST00000504644 TSPAN18Q96SJ8 248 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms