RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 INCENPQ9NQS7 918 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 SETSIPP0DME0 302 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 DDX11Q96FC9 970 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 SLKQ9H2G2 1235 aaPredicted RBP7.5□□□□□ -1.21
LINC02397-201ENST00000504409 ROCK1Q13464 1354 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 CHMP5Q9NZZ3 219 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 NEFHP12036 1026 aa7.5□□□□□ -1.21
LINC02397-201ENST00000504409 PRIMPOLQ96LW4 560 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 MCM2P49736 904 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 FTSJ3Q8IY81 847 aaKnown RBP7.49□□□□□ -1.21
LINC02397-201ENST00000504409 FBXO3Q9UK99 471 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 CAVIN2O95810 425 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 PDE4CQ08493 712 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 KNSTRNQ9Y448 316 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 MCM3P25205 808 aa7.49□□□□□ -1.21
LINC02397-201ENST00000504409 SMAP1Q8IYB5 467 aaPredicted RBP7.49□□□□□ -1.21
LINC02397-201ENST00000504409 A6NNZ2 444 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 TUBB8Q3ZCM7 444 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
LINC02397-201ENST00000504409 BCL11BQ9C0K0 894 aaPredicted RBP7.48□□□□□ -1.21
LINC02397-201ENST00000504409 WWC1Q8IX03 1113 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 GBP2P32456 591 aaPredicted RBP7.48□□□□□ -1.21
LINC02397-201ENST00000504409 BCCIPQ9P287 314 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC02397-201ENST00000504409 FAM9BQ8IZU0 186 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 TXLNBQ8N3L3 684 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 ZRSR2Q15696 482 aaKnown RBP7.48□□□□□ -1.21
LINC02397-201ENST00000504409 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
LINC02397-201ENST00000504409 KIF21AQ7Z4S6 1674 aa7.47□□□□□ -1.21
LINC02397-201ENST00000504409 GOLGA6L7A0A1B0GV03 622 aa7.47□□□□□ -1.21
LINC02397-201ENST00000504409 HSP90B2PQ58FF3 399 aa7.47□□□□□ -1.21
LINC02397-201ENST00000504409 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
LINC02397-201ENST00000504409 ANO8Q9HCE9 1232 aaPredicted RBP7.47□□□□□ -1.21
LINC02397-201ENST00000504409 PLEKHH1Q9ULM0 1364 aa7.47□□□□□ -1.21
LINC02397-201ENST00000504409 SMG6Q86US8 1419 aaKnown RBP7.47□□□□□ -1.21
LINC02397-201ENST00000504409 LEKR1Q6ZMV7 388 aa7.47□□□□□ -1.21
LINC02397-201ENST00000504409 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.21
LINC02397-201ENST00000504409 EFCAB5A4FU69 1503 aa7.46□□□□□ -1.21
LINC02397-201ENST00000504409 INSRP06213 1382 aa7.46□□□□□ -1.21
LINC02397-201ENST00000504409 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.21
LINC02397-201ENST00000504409 ITGAEP38570 1179 aa7.46□□□□□ -1.22
LINC02397-201ENST00000504409 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
LINC02397-201ENST00000504409 POLA1P09884 1462 aaPredicted RBP7.46□□□□□ -1.22
LINC02397-201ENST00000504409 CLCN1P35523 988 aa7.45□□□□□ -1.22
LINC02397-201ENST00000504409 CCDC191Q8NCU4 936 aa7.45□□□□□ -1.22
LINC02397-201ENST00000504409 V9GYY5 206 aaPredicted RBP7.45□□□□□ -1.22
LINC02397-201ENST00000504409 PLEKHG5O94827 1062 aa7.45□□□□□ -1.22
LINC02397-201ENST00000504409 HSPA5P11021 654 aaKnown RBP7.45□□□□□ -1.22
LINC02397-201ENST00000504409 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
LINC02397-201ENST00000504409 SARNPP82979 210 aaKnown RBP7.45□□□□□ -1.22
LINC02397-201ENST00000504409 TUBBP07437 444 aa7.45□□□□□ -1.22
LINC02397-201ENST00000504409 IVLP07476 585 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 RABEP1Q15276 862 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 NUTM1Q86Y26 1132 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 MYO6Q9UM54 1294 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 NAT10Q9H0A0 1025 aaKnown RBP7.44□□□□□ -1.22
LINC02397-201ENST00000504409 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
LINC02397-201ENST00000504409 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 NEMFO60524 1076 aa7.44□□□□□ -1.22
LINC02397-201ENST00000504409 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
LINC02397-201ENST00000504409 CCDC7Q96M83 1385 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 GOLGA6L10A0A0M3HER8 536 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 BRD2P25440 801 aaKnown RBP7.43□□□□□ -1.22
LINC02397-201ENST00000504409 CGNQ9P2M7 1197 aaKnown RBP7.43□□□□□ -1.22
LINC02397-201ENST00000504409 GOLGA6L10A6NI86 522 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 LIG1P18858 919 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 DRC7Q8IY82 874 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 FEZ1Q99689 392 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 CWC22Q9HCG8 908 aaKnown RBP7.43□□□□□ -1.22
LINC02397-201ENST00000504409 GBP3Q9H0R5 595 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 UACAQ9BZF9 1416 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 ZMYM4Q5VZL5 1548 aa7.43□□□□□ -1.22
LINC02397-201ENST00000504409 ERLIN1O75477 346 aa7.42□□□□□ -1.22
LINC02397-201ENST00000504409 RRBP1Q9P2E9 1410 aaKnown RBP7.42□□□□□ -1.22
LINC02397-201ENST00000504409 PAIP2Q9BPZ3 127 aaKnown RBP7.42□□□□□ -1.22
LINC02397-201ENST00000504409 HOOK1Q9UJC3 728 aaKnown RBP7.42□□□□□ -1.22
LINC02397-201ENST00000504409 PDE4AP27815 886 aa7.42□□□□□ -1.22
LINC02397-201ENST00000504409 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
LINC02397-201ENST00000504409 MYBBP1AQ9BQG0 1328 aaKnown RBP7.42□□□□□ -1.22
LINC02397-201ENST00000504409 REC8O95072 547 aa7.41□□□□□ -1.22
LINC02397-201ENST00000504409 NASPP49321 788 aaPredicted RBP7.41□□□□□ -1.22
LINC02397-201ENST00000504409 NEXNQ0ZGT2 675 aa7.41□□□□□ -1.22
LINC02397-201ENST00000504409 CLSTN1O94985 981 aa7.41□□□□□ -1.22
LINC02397-201ENST00000504409 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
LINC02397-201ENST00000504409 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
LINC02397-201ENST00000504409 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
LINC02397-201ENST00000504409 TMX4Q9H1E5 349 aaPredicted RBP7.41□□□□□ -1.22
LINC02397-201ENST00000504409 NAP1L2Q9ULW6 460 aaPredicted RBP7.41□□□□□ -1.22
LINC02397-201ENST00000504409 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.4□□□□□ -1.22
LINC02397-201ENST00000504409 TIGD1Q96MW7 591 aa7.4□□□□□ -1.22
LINC02397-201ENST00000504409 SASS6Q6UVJ0 657 aa7.4□□□□□ -1.22
LINC02397-201ENST00000504409 LUZP1Q86V48 1076 aa7.4□□□□□ -1.22
LINC02397-201ENST00000504409 UTP14CQ5TAP6 766 aaKnown RBP7.4□□□□□ -1.22
LINC02397-201ENST00000504409 KIAA1328Q86T90 577 aa7.4□□□□□ -1.22
LINC02397-201ENST00000504409 SUPT6HQ7KZ85 1726 aaKnown RBP7.4□□□□□ -1.22
LINC02397-201ENST00000504409 ESPNB1AK53 854 aa7.4□□□□□ -1.23
LINC02397-201ENST00000504409 THOC2Q8NI27 1593 aaKnown RBP7.4□□□□□ -1.23
LINC02397-201ENST00000504409 VGFO15240 615 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms