RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 KIF27Q86VH2 1401 aa13.71□□□□□ -0.21
AC055713.1-201ENST00000498967 FEZ1Q99689 392 aa13.71□□□□□ -0.21
AC055713.1-201ENST00000498967 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 PMFBP1Q8TBY8 1022 aa13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 ERLIN2O94905 339 aa13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 NACADO15069 1562 aa13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
AC055713.1-201ENST00000498967 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
AC055713.1-201ENST00000498967 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
AC055713.1-201ENST00000498967 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
AC055713.1-201ENST00000498967 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
AC055713.1-201ENST00000498967 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
AC055713.1-201ENST00000498967 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
AC055713.1-201ENST00000498967 MNS1Q8NEH6 495 aa13.68□□□□□ -0.22
AC055713.1-201ENST00000498967 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
AC055713.1-201ENST00000498967 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
AC055713.1-201ENST00000498967 GOLGA6L10A6NI86 522 aa13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 MIER1Q8N108 512 aa13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 SPAG9O60271 1321 aaKnown RBP13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
AC055713.1-201ENST00000498967 TRIM6-TRIM34B2RNG4 842 aa13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 PLCD4Q9BRC7 762 aa13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 SLKQ9H2G2 1235 aaPredicted RBP13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
AC055713.1-201ENST00000498967 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 PAF1Q8N7H5 531 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 ZNF592Q92610 1267 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 EPS15P42566 896 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 TRIM29Q14134 588 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 OFD1O75665 1012 aa13.65□□□□□ -0.22
AC055713.1-201ENST00000498967 DEF6Q9H4E7 631 aa13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 BAZ1BQ9UIG0 1483 aaKnown RBP13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 RABEP1Q15276 862 aa13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 CCP110O43303 1012 aa13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
AC055713.1-201ENST00000498967 SPATA24Q86W54 205 aa13.63□□□□□ -0.23
AC055713.1-201ENST00000498967 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
AC055713.1-201ENST00000498967 TXLNBQ8N3L3 684 aa13.63□□□□□ -0.23
AC055713.1-201ENST00000498967 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
AC055713.1-201ENST00000498967 LUC7LQ9NQ29 371 aaKnown RBP13.62□□□□□ -0.23
AC055713.1-201ENST00000498967 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
AC055713.1-201ENST00000498967 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
AC055713.1-201ENST00000498967 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
AC055713.1-201ENST00000498967 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
AC055713.1-201ENST00000498967 CFAP57Q96MR6 1250 aa13.61□□□□□ -0.23
AC055713.1-201ENST00000498967 ZFYVE27Q5T4F4 411 aa13.61□□□□□ -0.23
AC055713.1-201ENST00000498967 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
AC055713.1-201ENST00000498967 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
AC055713.1-201ENST00000498967 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
AC055713.1-201ENST00000498967 TOMM22Q9NS69 142 aa13.59□□□□□ -0.23
AC055713.1-201ENST00000498967 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
AC055713.1-201ENST00000498967 FAM13BQ9NYF5 915 aa13.59□□□□□ -0.23
AC055713.1-201ENST00000498967 RALBP1Q15311 655 aa13.59□□□□□ -0.23
AC055713.1-201ENST00000498967 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.23
AC055713.1-201ENST00000498967 NF2P35240 595 aa13.58□□□□□ -0.24
AC055713.1-201ENST00000498967 KIF3BO15066 747 aa13.58□□□□□ -0.24
AC055713.1-201ENST00000498967 TMF1P82094 1093 aa13.58□□□□□ -0.24
AC055713.1-201ENST00000498967 GBP2P32456 591 aaPredicted RBP13.57□□□□□ -0.24
AC055713.1-201ENST00000498967 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
AC055713.1-201ENST00000498967 CHMP5Q9NZZ3 219 aa13.57□□□□□ -0.24
AC055713.1-201ENST00000498967 STAMBPO95630 424 aa13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 ENOX2Q16206 610 aaKnown RBP13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 BCCIPQ9P287 314 aaKnown RBP eCLIP13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 EIF3AQ14152 1382 aaKnown RBP13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 FAM43AQ8N2R8 423 aa13.56□□□□□ -0.24
AC055713.1-201ENST00000498967 BAZ1AQ9NRL2 1556 aaPredicted RBP13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 HMGB1P1B2RPK0 211 aaPredicted RBP13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 ITPRIPQ8IWB1 547 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 GIMAP7Q8NHV1 300 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 DESP17661 470 aa13.55□□□□□ -0.24
AC055713.1-201ENST00000498967 RUFY2Q8WXA3 655 aa13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 APBB1O00213 710 aa13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 CCDC175P0C221 793 aa13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 CAVIN1Q6NZI2 390 aaKnown RBP13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 SASS6Q6UVJ0 657 aa13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 SYCP1Q15431 976 aa13.54□□□□□ -0.24
AC055713.1-201ENST00000498967 SMARCE1Q969G3 411 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms