RNA–Protein interactions for RNA: ENST00000497784.1

BRAF-205, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-205ENST00000497784 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
BRAF-205ENST00000497784 LRP5O75197 1615 aa14.68□□□□□ -0.06
BRAF-205ENST00000497784 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
BRAF-205ENST00000497784 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
BRAF-205ENST00000497784 MEX3CQ5U5Q3 659 aaKnown RBP14.66□□□□□ -0.06
BRAF-205ENST00000497784 SETBP1Q9Y6X0 1596 aa14.66□□□□□ -0.06
BRAF-205ENST00000497784 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
BRAF-205ENST00000497784 ROBO1Q9Y6N7 1651 aa14.66□□□□□ -0.06
BRAF-205ENST00000497784 KIF14Q15058 1648 aa14.66□□□□□ -0.06
BRAF-205ENST00000497784 ATAD2Q6PL18 1390 aa14.66□□□□□ -0.06
BRAF-205ENST00000497784 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
BRAF-205ENST00000497784 UGGT1Q9NYU2 1555 aa14.64□□□□□ -0.07
BRAF-205ENST00000497784 PZPP20742 1482 aa14.63□□□□□ -0.07
BRAF-205ENST00000497784 A2MP01023 1474 aa14.62□□□□□ -0.07
BRAF-205ENST00000497784 CLIP1P30622 1438 aa14.62□□□□□ -0.07
BRAF-205ENST00000497784 XIRP1Q702N8 1843 aaKnown RBP14.62□□□□□ -0.07
BRAF-205ENST00000497784 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
BRAF-205ENST00000497784 ZC3H13Q5T200 1668 aaKnown RBP14.61□□□□□ -0.07
BRAF-205ENST00000497784 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
BRAF-205ENST00000497784 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
BRAF-205ENST00000497784 MIA2Q96PC5 1412 aa14.6□□□□□ -0.07
BRAF-205ENST00000497784 LRP6O75581 1613 aa14.6□□□□□ -0.07
BRAF-205ENST00000497784 RBM6P78332 1123 aaKnown RBP14.59□□□□□ -0.07
BRAF-205ENST00000497784 RGS12O14924 1447 aa14.58□□□□□ -0.08
BRAF-205ENST00000497784 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
BRAF-205ENST00000497784 ABCC3O15438 1527 aa14.57□□□□□ -0.08
BRAF-205ENST00000497784 GGT6Q6P531 493 aa14.57□□□□□ -0.08
BRAF-205ENST00000497784 PREX2Q70Z35 1606 aa14.56□□□□□ -0.08
BRAF-205ENST00000497784 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
BRAF-205ENST00000497784 COL16A1Q07092 1604 aaPredicted RBP14.56□□□□□ -0.08
BRAF-205ENST00000497784 SHPRHQ149N8 1683 aa14.56□□□□□ -0.08
BRAF-205ENST00000497784 NUTM2BA6NNL0 878 aaPredicted RBP14.54□□□□□ -0.08
BRAF-205ENST00000497784 NUTM2EB1AL46 878 aaPredicted RBP14.54□□□□□ -0.08
BRAF-205ENST00000497784 NUTM2DQ5VT03 806 aaPredicted RBP14.54□□□□□ -0.08
BRAF-205ENST00000497784 NUTM2AQ8IVF1 878 aaPredicted RBP14.54□□□□□ -0.08
BRAF-205ENST00000497784 NGLY1Q96IV0 654 aa14.53□□□□□ -0.08
BRAF-205ENST00000497784 TMEM94Q12767 1356 aa14.53□□□□□ -0.08
BRAF-205ENST00000497784 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
BRAF-205ENST00000497784 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
BRAF-205ENST00000497784 ADGBQ8N7X0 1667 aa14.51□□□□□ -0.09
BRAF-205ENST00000497784 NWD1Q149M9 1564 aa14.51□□□□□ -0.09
BRAF-205ENST00000497784 NHSL1Q5SYE7 1610 aa14.5□□□□□ -0.09
BRAF-205ENST00000497784 MAP3K1Q13233 1512 aa14.5□□□□□ -0.09
BRAF-205ENST00000497784 SLAIN2Q9P270 581 aa14.5□□□□□ -0.09
BRAF-205ENST00000497784 KIAA1107Q9UPP5 1409 aa14.5□□□□□ -0.09
BRAF-205ENST00000497784 PLEKHH2Q8IVE3 1493 aa14.5□□□□□ -0.09
BRAF-205ENST00000497784 KCNA6P17658 529 aa14.49□□□□□ -0.09
BRAF-205ENST00000497784 FBXO31Q5XUX0 539 aaPredicted RBP14.49□□□□□ -0.09
BRAF-205ENST00000497784 AFF2P51816 1311 aa14.49□□□□□ -0.09
BRAF-205ENST00000497784 MSH6P52701 1360 aa14.49□□□□□ -0.09
BRAF-205ENST00000497784 AHDC1Q5TGY3 1603 aaPredicted RBP14.48□□□□□ -0.09
BRAF-205ENST00000497784 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
BRAF-205ENST00000497784 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
BRAF-205ENST00000497784 YY1P25490 414 aa14.47□□□□□ -0.09
BRAF-205ENST00000497784 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.09
BRAF-205ENST00000497784 SLIT1O75093 1534 aa14.46□□□□□ -0.09
BRAF-205ENST00000497784 PRDM15P57071 1507 aaPredicted RBP14.46□□□□□ -0.1
BRAF-205ENST00000497784 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
BRAF-205ENST00000497784 PROSER2Q86WR7 435 aaPredicted RBP14.44□□□□□ -0.1
BRAF-205ENST00000497784 TIAM1Q13009 1591 aa14.44□□□□□ -0.1
BRAF-205ENST00000497784 FMN1Q68DA7 1419 aa14.44□□□□□ -0.1
BRAF-205ENST00000497784 DHX29Q7Z478 1369 aaKnown RBP14.43□□□□□ -0.1
BRAF-205ENST00000497784 RTEL1-TNFRSF6BF6WH68 1400 aa14.43□□□□□ -0.1
BRAF-205ENST00000497784 EID1Q9Y6B2 187 aa14.41□□□□□ -0.1
BRAF-205ENST00000497784 TXNDC2Q86VQ3 553 aa14.4□□□□□ -0.11
BRAF-205ENST00000497784 SYCP2Q9BX26 1530 aa14.39□□□□□ -0.11
BRAF-205ENST00000497784 WASHC2CQ9Y4E1 1318 aa14.38□□□□□ -0.11
BRAF-205ENST00000497784 DIP2AQ14689 1571 aa14.38□□□□□ -0.11
BRAF-205ENST00000497784 UBR1Q8IWV7 1749 aa14.36□□□□□ -0.11
BRAF-205ENST00000497784 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
BRAF-205ENST00000497784 KDM5AP29375 1690 aaKnown RBP14.36□□□□□ -0.11
BRAF-205ENST00000497784 NCOA2Q15596 1464 aa14.35□□□□□ -0.11
BRAF-205ENST00000497784 CDC42BPAQ5VT25 1732 aa14.35□□□□□ -0.11
BRAF-205ENST00000497784 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
BRAF-205ENST00000497784 LTKP29376 864 aa14.35□□□□□ -0.11
BRAF-205ENST00000497784 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
BRAF-205ENST00000497784 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRAF-205ENST00000497784 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
BRAF-205ENST00000497784 ERVK-7P63135 1459 aa14.33□□□□□ -0.12
BRAF-205ENST00000497784 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
BRAF-205ENST00000497784 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 HRCP23327 699 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 CADPS2Q86UW7 1296 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 KIF3BO15066 747 aa14.3□□□□□ -0.12
BRAF-205ENST00000497784 CCDC18Q5T9S5 1454 aa14.29□□□□□ -0.12
BRAF-205ENST00000497784 TET3O43151 1660 aa14.28□□□□□ -0.12
BRAF-205ENST00000497784 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
BRAF-205ENST00000497784 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.12
BRAF-205ENST00000497784 C8orf37Q96NL8 207 aa14.27□□□□□ -0.12
BRAF-205ENST00000497784 ZNF777Q9ULD5 760 aaPredicted RBP14.27□□□□□ -0.12
BRAF-205ENST00000497784 TMEM2Q9UHN6 1383 aa14.27□□□□□ -0.12
BRAF-205ENST00000497784 ATRNO75882 1429 aa14.27□□□□□ -0.12
BRAF-205ENST00000497784 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
BRAF-205ENST00000497784 UNC13BO14795 1591 aa14.27□□□□□ -0.12
BRAF-205ENST00000497784 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
BRAF-205ENST00000497784 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.13
BRAF-205ENST00000497784 PTCH1Q13635 1447 aa14.23□□□□□ -0.13
BRAF-205ENST00000497784 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms