RNA–Protein interactions for RNA: ENST00000488729.5

KIDINS220-208, Transcript of kinase D interacting substrate 220, humanhuman

TSL 1 (best)

Gene KIDINS220, Length 5,988 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIDINS220-208ENST00000488729 SLC4A3P48751 1232 aa7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 CT47A1Q5JQC4 288 aaPredicted RBP7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 SETSIPP0DME0 302 aa7.53□□□□□ -1.2
KIDINS220-208ENST00000488729 ARGLU1Q9NWB6 273 aaPredicted RBP7.52□□□□□ -1.2
KIDINS220-208ENST00000488729 MRE11P49959 708 aa7.52□□□□□ -1.21
KIDINS220-208ENST00000488729 CCDC34Q96HJ3 373 aa7.52□□□□□ -1.21
KIDINS220-208ENST00000488729 SUDS3Q9H7L9 328 aaPredicted RBP7.52□□□□□ -1.21
KIDINS220-208ENST00000488729 HMGN5P82970 282 aaKnown RBP7.52□□□□□ -1.21
KIDINS220-208ENST00000488729 FAM50AQ14320 339 aaKnown RBP7.51□□□□□ -1.21
KIDINS220-208ENST00000488729 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
KIDINS220-208ENST00000488729 AK7Q96M32 723 aa7.51□□□□□ -1.21
KIDINS220-208ENST00000488729 TRIM6-TRIM34B2RNG4 842 aa7.51□□□□□ -1.21
KIDINS220-208ENST00000488729 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
KIDINS220-208ENST00000488729 PEG3Q9GZU2 1588 aa7.5□□□□□ -1.21
KIDINS220-208ENST00000488729 CDR1P51861 262 aa7.5□□□□□ -1.21
KIDINS220-208ENST00000488729 MNS1Q8NEH6 495 aa7.5□□□□□ -1.21
KIDINS220-208ENST00000488729 TOMM22Q9NS69 142 aa7.5□□□□□ -1.21
KIDINS220-208ENST00000488729 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 CPSF2Q9P2I0 782 aaKnown RBP7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 SKOR2Q2VWA4 1001 aaPredicted RBP7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 GOLGA6L19H0YKK7 550 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 SOX12O15370 315 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 HSP90B2PQ58FF3 399 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 TICAM2Q86XR7 235 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 PES1O00541 588 aaKnown RBP7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 TTLL5Q6EMB2 1281 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 ESPNB1AK53 854 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 CCP110O43303 1012 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 PPP4R3BQ5MIZ7 849 aa7.49□□□□□ -1.21
KIDINS220-208ENST00000488729 PIK3R5Q8WYR1 880 aa7.48□□□□□ -1.21
KIDINS220-208ENST00000488729 CASC1Q6TDU7 716 aa7.48□□□□□ -1.21
KIDINS220-208ENST00000488729 HMMRO75330 724 aa7.48□□□□□ -1.21
KIDINS220-208ENST00000488729 PDCL2Q8N4E4 241 aa7.48□□□□□ -1.21
KIDINS220-208ENST00000488729 ERCC6Q03468 1493 aa7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 DZIP1Q86YF9 867 aaKnown RBP7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 SMAP1Q8IYB5 467 aaPredicted RBP7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 GTPBP4Q9BZE4 634 aaKnown RBP7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 DDX49Q9Y6V7 483 aaKnown RBP7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 IBSPP21815 317 aaPredicted RBP7.47□□□□□ -1.21
KIDINS220-208ENST00000488729 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 CCDC39Q9UFE4 941 aa7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 GOLGA6L10A6NI86 522 aa7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 PHF14O94880 888 aa7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 LIG1P18858 919 aa7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 SKIDA1Q1XH10 827 aa7.46□□□□□ -1.21
KIDINS220-208ENST00000488729 CTR9Q6PD62 1173 aa7.46□□□□□ -1.22
KIDINS220-208ENST00000488729 DNAJC5BQ9UF47 199 aa7.46□□□□□ -1.22
KIDINS220-208ENST00000488729 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.22
KIDINS220-208ENST00000488729 PAF1Q8N7H5 531 aa7.46□□□□□ -1.22
KIDINS220-208ENST00000488729 KIAA0754O94854 1291 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 RALBP1Q15311 655 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 CCDC91Q7Z6B0 441 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 CENPHQ9H3R5 247 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 TPM4P67936 248 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 ENOX2Q16206 610 aaKnown RBP7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
KIDINS220-208ENST00000488729 PDS5BQ9NTI5 1447 aa7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 LRCH2Q5VUJ6 765 aa7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 PDE4AP27815 886 aa7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 MNAT1P51948 309 aa7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 SECISBP2LQ93073 1101 aaKnown RBP7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 MSH5O43196 834 aa7.44□□□□□ -1.22
KIDINS220-208ENST00000488729 CCDC173Q0VFZ6 552 aa7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 CCDC88BA6NC98 1476 aa7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 MYCBPQ99417 103 aaPredicted RBP7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 GOLGA6L10A0A0M3HER8 536 aa7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 SRPK2P78362 688 aaKnown RBP7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 DCTN1Q14203 1278 aa7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 DNAAF4Q8WXU2 420 aa7.43□□□□□ -1.22
KIDINS220-208ENST00000488729 NF2P35240 595 aa7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 KIF20AO95235 890 aa7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 NBPF1Q3BBV0 1214 aa7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 IFT57Q9NWB7 429 aa7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 CADPSQ9ULU8 1353 aa7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
KIDINS220-208ENST00000488729 STK31Q9BXU1 1019 aa7.41□□□□□ -1.22
KIDINS220-208ENST00000488729 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
KIDINS220-208ENST00000488729 ANAPC15P60006 121 aa7.41□□□□□ -1.22
KIDINS220-208ENST00000488729 DDX11Q96FC9 970 aa7.41□□□□□ -1.22
KIDINS220-208ENST00000488729 SPDYE4A6NLX3 237 aa7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 VGFO15240 615 aaPredicted RBP7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 TPM3P06753 285 aa7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 FRAT2O75474 233 aaPredicted RBP7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 MCCP23508 829 aa7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 RUFY1Q96T51 708 aa7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 ISY1Q9ULR0 285 aaKnown RBP7.4□□□□□ -1.22
KIDINS220-208ENST00000488729 HOMER1Q86YM7 354 aa7.4□□□□□ -1.23
KIDINS220-208ENST00000488729 SLC26A8Q96RN1 970 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms