RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ZFRQ96KR1 1074 aaKnown RBP8.23□□□□□ -1.09
R3HDM1-219ENST00000488035 PCDHGA10Q9Y5H3 936 aa8.23□□□□□ -1.09
R3HDM1-219ENST00000488035 NCKAP5LQ9HCH0 1330 aa8.23□□□□□ -1.09
R3HDM1-219ENST00000488035 COL9A1P20849 921 aa8.22□□□□□ -1.09
R3HDM1-219ENST00000488035 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
R3HDM1-219ENST00000488035 NKX1-1Q15270 411 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-219ENST00000488035 FBXW7Q969H0 707 aa8.21□□□□□ -1.1
R3HDM1-219ENST00000488035 GFRA3O60609 400 aa8.2□□□□□ -1.1
R3HDM1-219ENST00000488035 NRG2O14511 850 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-219ENST00000488035 MAP3K9P80192 1104 aa8.18□□□□□ -1.1
R3HDM1-219ENST00000488035 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
R3HDM1-219ENST00000488035 PHF14O94880 888 aa8.17□□□□□ -1.1
R3HDM1-219ENST00000488035 MFSD10Q14728 455 aa8.17□□□□□ -1.1
R3HDM1-219ENST00000488035 TYW1BQ6NUM6 668 aa8.17□□□□□ -1.1
R3HDM1-219ENST00000488035 DDX27Q96GQ7 796 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-219ENST00000488035 TSR3Q9UJK0 312 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-219ENST00000488035 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
R3HDM1-219ENST00000488035 LARP6Q9BRS8 491 aaKnown RBP8.16□□□□□ -1.1
R3HDM1-219ENST00000488035 V9GY48 417 aaPredicted RBP8.14□□□□□ -1.11
R3HDM1-219ENST00000488035 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
R3HDM1-219ENST00000488035 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
R3HDM1-219ENST00000488035 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
R3HDM1-219ENST00000488035 TJAP1Q5JTD0 557 aa8.11□□□□□ -1.11
R3HDM1-219ENST00000488035 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
R3HDM1-219ENST00000488035 EPAS1Q99814 870 aa8.11□□□□□ -1.11
R3HDM1-219ENST00000488035 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
R3HDM1-219ENST00000488035 LRCH3Q96II8 777 aa8.1□□□□□ -1.11
R3HDM1-219ENST00000488035 PRKD2Q9BZL6 878 aa8.1□□□□□ -1.11
R3HDM1-219ENST00000488035 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
R3HDM1-219ENST00000488035 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
R3HDM1-219ENST00000488035 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
R3HDM1-219ENST00000488035 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
R3HDM1-219ENST00000488035 PPP1R18Q6NYC8 613 aa8.04□□□□□ -1.12
R3HDM1-219ENST00000488035 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
R3HDM1-219ENST00000488035 PPP4CP60510 307 aa8.02□□□□□ -1.13
R3HDM1-219ENST00000488035 CAMK2BQ13554 666 aa8.02□□□□□ -1.13
R3HDM1-219ENST00000488035 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
R3HDM1-219ENST00000488035 PACS2Q86VP3 889 aa8□□□□□ -1.13
R3HDM1-219ENST00000488035 MTRQ99707 1265 aa8□□□□□ -1.13
R3HDM1-219ENST00000488035 TSKSQ9UJT2 592 aa8□□□□□ -1.13
R3HDM1-219ENST00000488035 PDZRN3Q9UPQ7 1066 aa8□□□□□ -1.13
R3HDM1-219ENST00000488035 POTECB2RU33 542 aa7.97□□□□□ -1.13
R3HDM1-219ENST00000488035 RTN4Q9NQC3 1192 aaKnown RBP7.97□□□□□ -1.13
R3HDM1-219ENST00000488035 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
R3HDM1-219ENST00000488035 DPYSL4O14531 572 aa7.95□□□□□ -1.14
R3HDM1-219ENST00000488035 SAMD7Q7Z3H4 446 aa7.95□□□□□ -1.14
R3HDM1-219ENST00000488035 ZNF516Q92618 1163 aa7.95□□□□□ -1.14
R3HDM1-219ENST00000488035 RBM33Q96EV2 1170 aaKnown RBP7.95□□□□□ -1.14
R3HDM1-219ENST00000488035 EN1Q05925 392 aaPredicted RBP7.94□□□□□ -1.14
R3HDM1-219ENST00000488035 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-219ENST00000488035 TRIM67Q6ZTA4 783 aa7.93□□□□□ -1.14
R3HDM1-219ENST00000488035 CADPS2Q86UW7 1296 aa7.93□□□□□ -1.14
R3HDM1-219ENST00000488035 C3orf80F5H4A9 247 aa7.92□□□□□ -1.14
R3HDM1-219ENST00000488035 DCAF8L2P0C7V8 631 aa7.92□□□□□ -1.14
R3HDM1-219ENST00000488035 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
R3HDM1-219ENST00000488035 DDX12PQ92771 950 aa7.91□□□□□ -1.14
R3HDM1-219ENST00000488035 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
R3HDM1-219ENST00000488035 MAP3K7O43318 606 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 DGAT1O75907 488 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 GGCXP38435 758 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 APLP1P51693 650 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 PRSS12P56730 875 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 CERKQ8TCT0 537 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 CDCA7LQ96GN5 454 aa7.9□□□□□ -1.14
R3HDM1-219ENST00000488035 PRR20EP86478 221 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 PRR20CP86479 221 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 PRR20DP86480 221 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 PRR20BP86481 221 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 PRR20AP86496 221 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 MYT1Q01538 1121 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 NBR1Q14596 966 aa7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 TSR1Q2NL82 804 aaKnown RBP7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 AMER1Q5JTC6 1135 aaPredicted RBP7.89□□□□□ -1.15
R3HDM1-219ENST00000488035 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
R3HDM1-219ENST00000488035 SPDYE16A6NNV3 312 aaPredicted RBP7.87□□□□□ -1.15
R3HDM1-219ENST00000488035 TATDN2Q93075 761 aa7.87□□□□□ -1.15
R3HDM1-219ENST00000488035 NBPF26B4DH59 902 aa7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 SMAPO00193 183 aa7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 HDGFP51858 240 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 PDIA6Q15084 440 aa7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 EMID1Q96A84 441 aaPredicted RBP7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 RBM27Q9P2N5 1060 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-219ENST00000488035 TREML4Q6UXN2 200 aa7.85□□□□□ -1.15
R3HDM1-219ENST00000488035 PNMA3Q9UL41 463 aa7.83□□□□□ -1.16
R3HDM1-219ENST00000488035 ZPR1O75312 459 aa7.82□□□□□ -1.16
R3HDM1-219ENST00000488035 SLC19A1P41440 591 aa7.82□□□□□ -1.16
R3HDM1-219ENST00000488035 PKDCCQ504Y2 493 aa7.82□□□□□ -1.16
R3HDM1-219ENST00000488035 SPRYD7Q5W111 196 aa7.82□□□□□ -1.16
R3HDM1-219ENST00000488035 ZNF598Q86UK7 904 aaKnown RBP7.81□□□□□ -1.16
R3HDM1-219ENST00000488035 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
R3HDM1-219ENST00000488035 RNF223E7ERA6 249 aa7.8□□□□□ -1.16
R3HDM1-219ENST00000488035 PRIM1P49642 420 aaKnown RBP7.79□□□□□ -1.16
R3HDM1-219ENST00000488035 GDF9O60383 454 aa7.78□□□□□ -1.16
R3HDM1-219ENST00000488035 RNF40O75150 1001 aa7.78□□□□□ -1.16
R3HDM1-219ENST00000488035 COPS2P61201 443 aa7.78□□□□□ -1.16
R3HDM1-219ENST00000488035 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
R3HDM1-219ENST00000488035 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
R3HDM1-219ENST00000488035 SLC4A3P48751 1232 aa7.77□□□□□ -1.17
R3HDM1-219ENST00000488035 ANKLE1Q8NAG6 615 aa7.77□□□□□ -1.17
R3HDM1-219ENST00000488035 PRR14Q9BWN1 585 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms