RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
COMMD6-210ENST00000483290 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
COMMD6-210ENST00000483290 TYW1BQ6NUM6 668 aa10.76□□□□□ -0.69
COMMD6-210ENST00000483290 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
COMMD6-210ENST00000483290 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
COMMD6-210ENST00000483290 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
COMMD6-210ENST00000483290 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
COMMD6-210ENST00000483290 COL9A1P20849 921 aa10.74□□□□□ -0.69
COMMD6-210ENST00000483290 WBP1LQ9NX94 342 aa10.74□□□□□ -0.69
COMMD6-210ENST00000483290 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
COMMD6-210ENST00000483290 PHF14O94880 888 aa10.73□□□□□ -0.69
COMMD6-210ENST00000483290 KIAA1468Q9P260 1216 aa10.73□□□□□ -0.69
COMMD6-210ENST00000483290 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
COMMD6-210ENST00000483290 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
COMMD6-210ENST00000483290 TSR3Q9UJK0 312 aaKnown RBP10.69□□□□□ -0.7
COMMD6-210ENST00000483290 GFRA3O60609 400 aa10.68□□□□□ -0.7
COMMD6-210ENST00000483290 MFSD10Q14728 455 aa10.68□□□□□ -0.7
COMMD6-210ENST00000483290 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
COMMD6-210ENST00000483290 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
COMMD6-210ENST00000483290 TRAF7Q6Q0C0 670 aa10.67□□□□□ -0.7
COMMD6-210ENST00000483290 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
COMMD6-210ENST00000483290 EPAS1Q99814 870 aa10.66□□□□□ -0.7
COMMD6-210ENST00000483290 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
COMMD6-210ENST00000483290 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
COMMD6-210ENST00000483290 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
COMMD6-210ENST00000483290 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
COMMD6-210ENST00000483290 PPP4CP60510 307 aa10.59□□□□□ -0.71
COMMD6-210ENST00000483290 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
COMMD6-210ENST00000483290 PACS2Q86VP3 889 aa10.57□□□□□ -0.72
COMMD6-210ENST00000483290 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
COMMD6-210ENST00000483290 RBM33Q96EV2 1170 aaKnown RBP10.56□□□□□ -0.72
COMMD6-210ENST00000483290 LCE2BO14633 110 aa10.53□□□□□ -0.72
COMMD6-210ENST00000483290 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
COMMD6-210ENST00000483290 DPYSL4O14531 572 aa10.51□□□□□ -0.73
COMMD6-210ENST00000483290 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
COMMD6-210ENST00000483290 TJAP1Q5JTD0 557 aa10.5□□□□□ -0.73
COMMD6-210ENST00000483290 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
COMMD6-210ENST00000483290 PPP1R18Q6NYC8 613 aa10.49□□□□□ -0.73
COMMD6-210ENST00000483290 DDX12PQ92771 950 aa10.49□□□□□ -0.73
COMMD6-210ENST00000483290 MAP3K7O43318 606 aa10.48□□□□□ -0.73
COMMD6-210ENST00000483290 MTRQ99707 1265 aa10.48□□□□□ -0.73
COMMD6-210ENST00000483290 CAMK2BQ13554 666 aa10.47□□□□□ -0.73
COMMD6-210ENST00000483290 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
COMMD6-210ENST00000483290 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.73
COMMD6-210ENST00000483290 NBR1Q14596 966 aa10.46□□□□□ -0.73
COMMD6-210ENST00000483290 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
COMMD6-210ENST00000483290 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.46□□□□□ -0.73
COMMD6-210ENST00000483290 HDGFP51858 240 aaKnown RBP10.45□□□□□ -0.74
COMMD6-210ENST00000483290 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
COMMD6-210ENST00000483290 GGCXP38435 758 aa10.44□□□□□ -0.74
COMMD6-210ENST00000483290 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
COMMD6-210ENST00000483290 RNF40O75150 1001 aa10.42□□□□□ -0.74
COMMD6-210ENST00000483290 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
COMMD6-210ENST00000483290 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
COMMD6-210ENST00000483290 CERKQ8TCT0 537 aa10.42□□□□□ -0.74
COMMD6-210ENST00000483290 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
COMMD6-210ENST00000483290 SMAPO00193 183 aa10.41□□□□□ -0.74
COMMD6-210ENST00000483290 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
COMMD6-210ENST00000483290 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
COMMD6-210ENST00000483290 PRSS12P56730 875 aa10.39□□□□□ -0.75
COMMD6-210ENST00000483290 PNMA3Q9UL41 463 aa10.39□□□□□ -0.75
COMMD6-210ENST00000483290 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
COMMD6-210ENST00000483290 TATDN2Q93075 761 aa10.37□□□□□ -0.75
COMMD6-210ENST00000483290 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
COMMD6-210ENST00000483290 PDIA6Q15084 440 aa10.35□□□□□ -0.75
COMMD6-210ENST00000483290 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
COMMD6-210ENST00000483290 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
COMMD6-210ENST00000483290 APLP1P51693 650 aa10.33□□□□□ -0.76
COMMD6-210ENST00000483290 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
COMMD6-210ENST00000483290 MYT1Q01538 1121 aa10.32□□□□□ -0.76
COMMD6-210ENST00000483290 FAM198AQ9UFP1 575 aa10.31□□□□□ -0.76
COMMD6-210ENST00000483290 COPS2P61201 443 aa10.3□□□□□ -0.76
COMMD6-210ENST00000483290 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
COMMD6-210ENST00000483290 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
COMMD6-210ENST00000483290 SLF2Q8IX21 1173 aa10.3□□□□□ -0.76
COMMD6-210ENST00000483290 NKX2-3Q8TAU0 364 aa10.3□□□□□ -0.76
COMMD6-210ENST00000483290 RBM27Q9P2N5 1060 aaKnown RBP10.28□□□□□ -0.76
COMMD6-210ENST00000483290 PRR14Q9BWN1 585 aa10.27□□□□□ -0.77
COMMD6-210ENST00000483290 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
COMMD6-210ENST00000483290 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
COMMD6-210ENST00000483290 ZPR1O75312 459 aa10.24□□□□□ -0.77
COMMD6-210ENST00000483290 DGAT1O75907 488 aa10.24□□□□□ -0.77
COMMD6-210ENST00000483290 SLC19A1P41440 591 aa10.24□□□□□ -0.77
COMMD6-210ENST00000483290 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
COMMD6-210ENST00000483290 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
COMMD6-210ENST00000483290 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.77
COMMD6-210ENST00000483290 CDHR5Q9HBB8 845 aa10.19□□□□□ -0.78
COMMD6-210ENST00000483290 RNF223E7ERA6 249 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRR20EP86478 221 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRR20CP86479 221 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRR20DP86480 221 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRR20BP86481 221 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRR20AP86496 221 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 TRIM67Q6ZTA4 783 aa10.18□□□□□ -0.78
COMMD6-210ENST00000483290 ZNF598Q86UK7 904 aaKnown RBP10.18□□□□□ -0.78
COMMD6-210ENST00000483290 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
COMMD6-210ENST00000483290 SPRYD7Q5W111 196 aa10.17□□□□□ -0.78
COMMD6-210ENST00000483290 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
COMMD6-210ENST00000483290 E2F4Q16254 413 aa10.16□□□□□ -0.78
COMMD6-210ENST00000483290 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms