RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ITGBL1O95965 494 aaPredicted RBP9.32□□□□□ -0.92
ECHDC1-215ENST00000475319 CADPS2Q86UW7 1296 aa9.31□□□□□ -0.92
ECHDC1-215ENST00000475319 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
ECHDC1-215ENST00000475319 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
ECHDC1-215ENST00000475319 WDR70Q9NW82 654 aa9.3□□□□□ -0.92
ECHDC1-215ENST00000475319 NRG2O14511 850 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-215ENST00000475319 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
ECHDC1-215ENST00000475319 SLC4A5Q9BY07 1137 aa9.27□□□□□ -0.93
ECHDC1-215ENST00000475319 NLRP6P59044 892 aa9.26□□□□□ -0.93
ECHDC1-215ENST00000475319 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-215ENST00000475319 ABCC9O60706 1549 aa9.24□□□□□ -0.93
ECHDC1-215ENST00000475319 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
ECHDC1-215ENST00000475319 BHMG1C9JSJ3 638 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-215ENST00000475319 TMC2Q8TDI7 906 aa9.23□□□□□ -0.93
ECHDC1-215ENST00000475319 KCNC4Q03721 635 aa9.21□□□□□ -0.94
ECHDC1-215ENST00000475319 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-215ENST00000475319 CCDC180Q9P1Z9 1646 aa9.18□□□□□ -0.94
ECHDC1-215ENST00000475319 PTCD2Q8WV60 388 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-215ENST00000475319 LOC100996750A0A140TA64 210 aa9.17□□□□□ -0.94
ECHDC1-215ENST00000475319 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
ECHDC1-215ENST00000475319 KRTAP4-6Q9BYQ5 205 aa9.17□□□□□ -0.94
ECHDC1-215ENST00000475319 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
ECHDC1-215ENST00000475319 TBC1D12O60347 775 aa9.15□□□□□ -0.94
ECHDC1-215ENST00000475319 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
ECHDC1-215ENST00000475319 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.95
ECHDC1-215ENST00000475319 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.95
ECHDC1-215ENST00000475319 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-215ENST00000475319 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
ECHDC1-215ENST00000475319 SEMA3EO15041 775 aa9.11□□□□□ -0.95
ECHDC1-215ENST00000475319 FBXO22Q8NEZ5 403 aa9.11□□□□□ -0.95
ECHDC1-215ENST00000475319 ANKK1Q8NFD2 765 aa9.11□□□□□ -0.95
ECHDC1-215ENST00000475319 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-215ENST00000475319 E2F4Q16254 413 aa9.1□□□□□ -0.95
ECHDC1-215ENST00000475319 ANP32EQ9BTT0 268 aa9.1□□□□□ -0.95
ECHDC1-215ENST00000475319 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
ECHDC1-215ENST00000475319 PTPREP23469 700 aa9.08□□□□□ -0.96
ECHDC1-215ENST00000475319 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
ECHDC1-215ENST00000475319 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
ECHDC1-215ENST00000475319 PPP1R37O75864 691 aa9.07□□□□□ -0.96
ECHDC1-215ENST00000475319 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
ECHDC1-215ENST00000475319 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
ECHDC1-215ENST00000475319 ACIN1Q9UKV3 1341 aaKnown RBP9.06□□□□□ -0.96
ECHDC1-215ENST00000475319 V9GY48 417 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-215ENST00000475319 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
ECHDC1-215ENST00000475319 ZMYND10O75800 440 aa9.04□□□□□ -0.96
ECHDC1-215ENST00000475319 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
ECHDC1-215ENST00000475319 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
ECHDC1-215ENST00000475319 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
ECHDC1-215ENST00000475319 ZEB1P37275 1124 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-215ENST00000475319 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-215ENST00000475319 BCAMP50895 628 aa8.98□□□□□ -0.97
ECHDC1-215ENST00000475319 RANGAP1P46060 587 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-215ENST00000475319 SMYD5Q6GMV2 418 aa8.97□□□□□ -0.97
ECHDC1-215ENST00000475319 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
ECHDC1-215ENST00000475319 BARGINQ6ZT62 677 aa8.96□□□□□ -0.97
ECHDC1-215ENST00000475319 LARP6Q9BRS8 491 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-215ENST00000475319 PLPP6Q8IY26 295 aa8.95□□□□□ -0.98
ECHDC1-215ENST00000475319 GPBP1L1Q9HC44 474 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-215ENST00000475319 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
ECHDC1-215ENST00000475319 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
ECHDC1-215ENST00000475319 RABGEF1Q9UJ41 708 aa8.94□□□□□ -0.98
ECHDC1-215ENST00000475319 FOXK1P85037 733 aa8.93□□□□□ -0.98
ECHDC1-215ENST00000475319 LCE2AQ5TA79 106 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-215ENST00000475319 INSM1Q01101 510 aaPredicted RBP8.91□□□□□ -0.98
ECHDC1-215ENST00000475319 PODXL2Q9NZ53 605 aa8.91□□□□□ -0.98
ECHDC1-215ENST00000475319 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-215ENST00000475319 PDE4AP27815 886 aa8.9□□□□□ -0.98
ECHDC1-215ENST00000475319 MFSD10Q14728 455 aa8.9□□□□□ -0.98
ECHDC1-215ENST00000475319 IL27Q8NEV9 243 aa8.9□□□□□ -0.98
ECHDC1-215ENST00000475319 AK7Q96M32 723 aa8.9□□□□□ -0.98
ECHDC1-215ENST00000475319 FOSBP53539 338 aa8.9□□□□□ -0.99
ECHDC1-215ENST00000475319 ARIH1Q9Y4X5 557 aaPredicted RBP8.9□□□□□ -0.99
ECHDC1-215ENST00000475319 RBM26Q5T8P6 1007 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-215ENST00000475319 DDX27Q96GQ7 796 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-215ENST00000475319 ZMYND15Q9H091 742 aa8.88□□□□□ -0.99
ECHDC1-215ENST00000475319 CRISPLD2Q9H0B8 497 aa8.88□□□□□ -0.99
ECHDC1-215ENST00000475319 PKDCCQ504Y2 493 aa8.87□□□□□ -0.99
ECHDC1-215ENST00000475319 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
ECHDC1-215ENST00000475319 MLLT3P42568 568 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-215ENST00000475319 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-215ENST00000475319 ZFRQ96KR1 1074 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-215ENST00000475319 KDM4CQ9H3R0 1056 aa8.86□□□□□ -0.99
ECHDC1-215ENST00000475319 POTECB2RU33 542 aa8.85□□□□□ -0.99
ECHDC1-215ENST00000475319 DGAT1O75907 488 aa8.85□□□□□ -0.99
ECHDC1-215ENST00000475319 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-215ENST00000475319 CAMK2BQ13554 666 aa8.85□□□□□ -0.99
ECHDC1-215ENST00000475319 PPP1R18Q6NYC8 613 aa8.85□□□□□ -0.99
ECHDC1-215ENST00000475319 WFS1O76024 890 aa8.84□□□□□ -0.99
ECHDC1-215ENST00000475319 ZDHHC16Q969W1 377 aa8.84□□□□□ -0.99
ECHDC1-215ENST00000475319 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-215ENST00000475319 RB1CC1Q8TDY2 1594 aa8.83□□□□□ -1
ECHDC1-215ENST00000475319 NEUROD1Q13562 356 aa8.83□□□□□ -1
ECHDC1-215ENST00000475319 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
ECHDC1-215ENST00000475319 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
ECHDC1-215ENST00000475319 PKNOX2Q96KN3 472 aa8.82□□□□□ -1
ECHDC1-215ENST00000475319 PPP1R3GB7ZBB8 358 aa8.81□□□□□ -1
ECHDC1-215ENST00000475319 TRIM66O15016 1216 aa8.81□□□□□ -1
ECHDC1-215ENST00000475319 PDE4DQ08499 809 aa8.81□□□□□ -1
ECHDC1-215ENST00000475319 JPH4Q96JJ6 628 aa8.81□□□□□ -1
ECHDC1-215ENST00000475319 GPHNQ9NQX3 736 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms