RNA–Protein interactions for RNA: ENST00000474387.1

AC055731.1-201, humanhuman

BASIC

Gene AC055731.1, Length 401 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055731.1-201ENST00000474387 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.92
AC055731.1-201ENST00000474387 SMARCA5O60264 1052 aaPredicted RBP3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 CLSTN1O94985 981 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 NEFLP07196 543 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 CSB-PGBD3P0DP91 1061 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 CHRM1P11229 460 aaPredicted RBP3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 TIE1P35590 1138 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 TTLL12Q14166 644 aaPredicted RBP3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 SND1Q7KZF4 910 aaKnown RBP eCLIP3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 CERS3Q8IU89 383 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 WWC1Q8IX03 1113 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 ANKRD13AQ8IZ07 590 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 ZNF592Q92610 1267 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 KRTAP3-3Q9BYR6 98 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 KRTAP3-2Q9BYR7 98 aa3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 COLQQ9Y215 455 aaPredicted RBP3.02□□□□□ -1.93
AC055731.1-201ENST00000474387 PARP9Q8IXQ6 854 aa3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 SLAIN1Q8ND83 568 aa3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 CALR3Q96L12 384 aaKnown RBP3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 DRC1Q96MC2 740 aa3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 ARIH1Q9Y4X5 557 aaPredicted RBP3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 IVNS1ABPQ9Y6Y0 642 aa3.01□□□□□ -1.93
AC055731.1-201ENST00000474387 MINK1Q8N4C8 1332 aaPredicted RBP3□□□□□ -1.93
AC055731.1-201ENST00000474387 UNCXA6NJT0 531 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 MLLT3P42568 568 aaPredicted RBP3□□□□□ -1.93
AC055731.1-201ENST00000474387 IER5LQ5T953 404 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 TICAM2Q86XR7 235 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 ZNF526Q8TF50 670 aaPredicted RBP3□□□□□ -1.93
AC055731.1-201ENST00000474387 CCDC102AQ96A19 550 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 SPATA32Q96LK8 384 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 LARP6Q9BRS8 491 aaKnown RBP3□□□□□ -1.93
AC055731.1-201ENST00000474387 PPP1R1BQ9UD71 204 aaPredicted RBP3□□□□□ -1.93
AC055731.1-201ENST00000474387 USTQ9Y2C2 406 aa3□□□□□ -1.93
AC055731.1-201ENST00000474387 SNPHO15079 494 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 KDM4AO75164 1064 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 PYGBP11216 843 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 PDE4AP27815 886 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 AMHR2Q16671 573 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 TSR1Q2NL82 804 aaKnown RBP2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 CC2D2BQ6DHV5 1058 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 NOL8Q76FK4 1167 aaKnown RBP2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 SREK1Q8WXA9 508 aaKnown RBP2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 KIF12Q96FN5 646 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 COG6Q9Y2V7 657 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 CCDC61Q9Y6R9 512 aa2.99□□□□□ -1.93
AC055731.1-201ENST00000474387 RBM47A0AV96 593 aaKnown RBP2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 ANKRD62A6NC57 917 aa2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 MAP2K5Q13163 448 aa2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 PBXIP1Q96AQ6 731 aa2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 MRRFQ96E11 262 aaKnown RBP2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 TRPC6Q9Y210 931 aa2.98□□□□□ -1.93
AC055731.1-201ENST00000474387 NUTM2FA1L443 756 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 SPDYE5A6NIY4 337 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 IRF6O14896 467 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 SEC24BO95487 1268 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 RFX1P22670 979 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 SH3D19Q5HYK7 790 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 DDX27Q96GQ7 796 aaKnown RBP2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 MFRPQ9BY79 579 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 IGSF5Q9NSI5 407 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 BRPF3Q9ULD4 1205 aa2.97□□□□□ -1.93
AC055731.1-201ENST00000474387 TTLL13PA6NNM8 815 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 PPP1R37O75864 691 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 TCF3P15923 654 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 GIGYF2Q6Y7W6 1299 aaKnown RBP2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 GLMNQ92990 594 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 MARVELD3Q96A59 401 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 PRM3Q9NNZ6 103 aa2.96□□□□□ -1.94
AC055731.1-201ENST00000474387 NCKAP5LQ9HCH0 1330 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 POTEB3A0JP26 581 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 MARCH6O60337 910 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 MS4A1P11836 297 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 NLRP6P59044 892 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 PDAP1Q13442 181 aaKnown RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 SF3A1Q15459 793 aaKnown RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 SKIV2LQ15477 1246 aaKnown RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 ZNF326Q5BKZ1 582 aaKnown RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 POTEBQ6S5H4 581 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 ZNF467Q7Z7K2 595 aaPredicted RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 UBXN4Q92575 508 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 C8orf37Q96NL8 207 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 HIRIP3Q9BW71 556 aaPredicted RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 VRTNQ9H8Y1 702 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 KIAA1522Q9P206 1035 aaPredicted RBP2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 CADPSQ9ULU8 1353 aa2.95□□□□□ -1.94
AC055731.1-201ENST00000474387 CARNS1A5YM72 827 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 GPR37O15354 613 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 SOX12O15370 315 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 TBC1D12O60347 775 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 ERCC3P19447 782 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 ABL2P42684 1182 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 ZC3H6P61129 1189 aaKnown RBP2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 MFSD10Q14728 455 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 B4GALNT3Q6L9W6 998 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 HS3ST6Q96QI5 342 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 BCL2L13Q9BXK5 485 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 MYH16Q9H6N6 1097 aa2.94□□□□□ -1.94
AC055731.1-201ENST00000474387 GDPD2Q9HCC8 539 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms