RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
CD46-211ENST00000464082 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
CD46-211ENST00000464082 MFSD10Q14728 455 aa12.1□□□□□ -0.47
CD46-211ENST00000464082 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
CD46-211ENST00000464082 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
CD46-211ENST00000464082 ZFRQ96KR1 1074 aaKnown RBP12.07□□□□□ -0.48
CD46-211ENST00000464082 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
CD46-211ENST00000464082 Q6ZNB5 142 aa12.06□□□□□ -0.48
CD46-211ENST00000464082 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
CD46-211ENST00000464082 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
CD46-211ENST00000464082 PHF14O94880 888 aa12.04□□□□□ -0.48
CD46-211ENST00000464082 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
CD46-211ENST00000464082 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
CD46-211ENST00000464082 KCNC4Q03721 635 aa12□□□□□ -0.49
CD46-211ENST00000464082 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
CD46-211ENST00000464082 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
CD46-211ENST00000464082 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
CD46-211ENST00000464082 TRIM6-TRIM34B2RNG4 842 aa11.96□□□□□ -0.49
CD46-211ENST00000464082 LCE2BO14633 110 aa11.96□□□□□ -0.49
CD46-211ENST00000464082 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
CD46-211ENST00000464082 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
CD46-211ENST00000464082 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
CD46-211ENST00000464082 EPAS1Q99814 870 aa11.93□□□□□ -0.5
CD46-211ENST00000464082 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
CD46-211ENST00000464082 TSR3Q9UJK0 312 aaKnown RBP11.93□□□□□ -0.5
CD46-211ENST00000464082 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
CD46-211ENST00000464082 DPYSL4O14531 572 aa11.92□□□□□ -0.5
CD46-211ENST00000464082 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
CD46-211ENST00000464082 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
CD46-211ENST00000464082 DDX12PQ92771 950 aa11.89□□□□□ -0.51
CD46-211ENST00000464082 GFRA3O60609 400 aa11.87□□□□□ -0.51
CD46-211ENST00000464082 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
CD46-211ENST00000464082 LAPTM4AQ15012 233 aa11.85□□□□□ -0.51
CD46-211ENST00000464082 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
CD46-211ENST00000464082 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
CD46-211ENST00000464082 PPP4CP60510 307 aa11.82□□□□□ -0.52
CD46-211ENST00000464082 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
CD46-211ENST00000464082 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
CD46-211ENST00000464082 SMAPO00193 183 aa11.8□□□□□ -0.52
CD46-211ENST00000464082 PRKD2Q9BZL6 878 aa11.8□□□□□ -0.52
CD46-211ENST00000464082 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
CD46-211ENST00000464082 NBR1Q14596 966 aa11.79□□□□□ -0.52
CD46-211ENST00000464082 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
CD46-211ENST00000464082 MAP3K7O43318 606 aa11.78□□□□□ -0.52
CD46-211ENST00000464082 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
CD46-211ENST00000464082 DCAF8L2P0C7V8 631 aa11.77□□□□□ -0.53
CD46-211ENST00000464082 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
CD46-211ENST00000464082 PPP1R18Q6NYC8 613 aa11.76□□□□□ -0.53
CD46-211ENST00000464082 MTRQ99707 1265 aa11.76□□□□□ -0.53
CD46-211ENST00000464082 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
CD46-211ENST00000464082 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
CD46-211ENST00000464082 ABCC9O60706 1549 aa11.72□□□□□ -0.53
CD46-211ENST00000464082 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
CD46-211ENST00000464082 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
CD46-211ENST00000464082 PRSS12P56730 875 aa11.71□□□□□ -0.53
CD46-211ENST00000464082 PDIA6Q15084 440 aa11.7□□□□□ -0.54
CD46-211ENST00000464082 IL21Q9HBE4 155 aa11.7□□□□□ -0.54
CD46-211ENST00000464082 TATDN2Q93075 761 aa11.68□□□□□ -0.54
CD46-211ENST00000464082 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
CD46-211ENST00000464082 NKX2-3Q8TAU0 364 aa11.67□□□□□ -0.54
CD46-211ENST00000464082 APLP1P51693 650 aa11.66□□□□□ -0.54
CD46-211ENST00000464082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.66□□□□□ -0.54
CD46-211ENST00000464082 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
CD46-211ENST00000464082 RNF40O75150 1001 aa11.64□□□□□ -0.55
CD46-211ENST00000464082 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
CD46-211ENST00000464082 ZNF787Q6DD87 383 aa11.62□□□□□ -0.55
CD46-211ENST00000464082 NUDT18Q6ZVK8 323 aa11.62□□□□□ -0.55
CD46-211ENST00000464082 GRXCR2A6NFK2 248 aa11.61□□□□□ -0.55
CD46-211ENST00000464082 SPDYE16A6NNV3 312 aaPredicted RBP11.61□□□□□ -0.55
CD46-211ENST00000464082 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
CD46-211ENST00000464082 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
CD46-211ENST00000464082 CERKQ8TCT0 537 aa11.6□□□□□ -0.55
CD46-211ENST00000464082 COPS2P61201 443 aa11.58□□□□□ -0.56
CD46-211ENST00000464082 OSBPP22059 807 aa11.55□□□□□ -0.56
CD46-211ENST00000464082 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
CD46-211ENST00000464082 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
CD46-211ENST00000464082 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
CD46-211ENST00000464082 E2F4Q16254 413 aa11.51□□□□□ -0.57
CD46-211ENST00000464082 TRIM67Q6ZTA4 783 aa11.51□□□□□ -0.57
CD46-211ENST00000464082 GGCXP38435 758 aa11.5□□□□□ -0.57
CD46-211ENST00000464082 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
CD46-211ENST00000464082 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
CD46-211ENST00000464082 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
CD46-211ENST00000464082 ZPR1O75312 459 aa11.48□□□□□ -0.57
CD46-211ENST00000464082 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
CD46-211ENST00000464082 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
CD46-211ENST00000464082 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
CD46-211ENST00000464082 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
CD46-211ENST00000464082 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
CD46-211ENST00000464082 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
CD46-211ENST00000464082 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
CD46-211ENST00000464082 SLC19A1P41440 591 aa11.44□□□□□ -0.58
CD46-211ENST00000464082 POTECB2RU33 542 aa11.43□□□□□ -0.58
CD46-211ENST00000464082 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
CD46-211ENST00000464082 MYT1Q01538 1121 aa11.42□□□□□ -0.58
CD46-211ENST00000464082 EYA1Q99502 592 aa11.42□□□□□ -0.58
CD46-211ENST00000464082 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
CD46-211ENST00000464082 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
CD46-211ENST00000464082 TLL1O43897 1013 aa11.4□□□□□ -0.58
CD46-211ENST00000464082 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms