RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PTGER2P43116 358 aa5.72□□□□□ -1.49
HMGB3P8-201ENST00000449709 FAM9AQ8IZU1 332 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P8-201ENST00000449709 AK7Q96M32 723 aa5.71□□□□□ -1.5
HMGB3P8-201ENST00000449709 ARHGAP33O14559 1287 aa5.7□□□□□ -1.5
HMGB3P8-201ENST00000449709 UPF1Q92900 1129 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB3P8-201ENST00000449709 PSDA5PKW4 1024 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 TBC1D12O60347 775 aa5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 MLLT3P42568 568 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 PSEN2P49810 448 aa5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 RBM26Q5T8P6 1007 aaKnown RBP5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 OXER1Q8TDS5 423 aa5.69□□□□□ -1.5
HMGB3P8-201ENST00000449709 PPP1R15BQ5SWA1 713 aa5.68□□□□□ -1.5
HMGB3P8-201ENST00000449709 ADGRD1Q6QNK2 874 aa5.68□□□□□ -1.5
HMGB3P8-201ENST00000449709 GPBP1L1Q9HC44 474 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P8-201ENST00000449709 PPP4R3BQ5MIZ7 849 aa5.67□□□□□ -1.5
HMGB3P8-201ENST00000449709 GPIHBP1Q8IV16 184 aa5.67□□□□□ -1.5
HMGB3P8-201ENST00000449709 KRI1Q8N9T8 703 aaKnown RBP5.66□□□□□ -1.5
HMGB3P8-201ENST00000449709 TRIM66O15016 1216 aa5.65□□□□□ -1.5
HMGB3P8-201ENST00000449709 IL27Q8NEV9 243 aa5.65□□□□□ -1.5
HMGB3P8-201ENST00000449709 KCNK17Q96T54 332 aa5.65□□□□□ -1.5
HMGB3P8-201ENST00000449709 KDM4CQ9H3R0 1056 aa5.65□□□□□ -1.5
HMGB3P8-201ENST00000449709 CCDC180Q9P1Z9 1646 aa5.65□□□□□ -1.51
HMGB3P8-201ENST00000449709 HRO43593 1189 aa5.64□□□□□ -1.51
HMGB3P8-201ENST00000449709 ZNF454Q8N9F8 522 aa5.64□□□□□ -1.51
HMGB3P8-201ENST00000449709 TK2O00142 265 aa5.63□□□□□ -1.51
HMGB3P8-201ENST00000449709 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P8-201ENST00000449709 PDE4DQ08499 809 aa5.63□□□□□ -1.51
HMGB3P8-201ENST00000449709 ZMYND15Q9H091 742 aa5.63□□□□□ -1.51
HMGB3P8-201ENST00000449709 EMILIN3Q9NT22 766 aa5.63□□□□□ -1.51
HMGB3P8-201ENST00000449709 SPDYE16A6NNV3 312 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P8-201ENST00000449709 DPYSL4O14531 572 aa5.62□□□□□ -1.51
HMGB3P8-201ENST00000449709 PDIA6Q15084 440 aa5.62□□□□□ -1.51
HMGB3P8-201ENST00000449709 PPARGC1BQ86YN6 1023 aaKnown RBP5.62□□□□□ -1.51
HMGB3P8-201ENST00000449709 GPR37O15354 613 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 EVI5O60447 810 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 FOSBP53539 338 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 MYO15BQ96JP2 1530 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 ACIN1Q9UKV3 1341 aaKnown RBP5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 VPS9D1Q9Y2B5 631 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 DCAF1Q9Y4B6 1507 aa5.61□□□□□ -1.51
HMGB3P8-201ENST00000449709 KCTD12Q96CX2 325 aaKnown RBP5.6□□□□□ -1.51
HMGB3P8-201ENST00000449709 KCNH8Q96L42 1107 aa5.6□□□□□ -1.51
HMGB3P8-201ENST00000449709 BCL2L12Q9HB09 334 aa5.6□□□□□ -1.51
HMGB3P8-201ENST00000449709 ANO8Q9HCE9 1232 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P8-201ENST00000449709 HCSTQ9UBK5 93 aa5.6□□□□□ -1.51
HMGB3P8-201ENST00000449709 RSPH6AQ9H0K4 717 aa5.59□□□□□ -1.51
HMGB3P8-201ENST00000449709 UBTFP17480 764 aaKnown RBP5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 MAP3K9P80192 1104 aa5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 JPH4Q96JJ6 628 aa5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 STAC3Q96MF2 364 aa5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 ADAM33Q9BZ11 813 aa5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 PLA2G2EQ9NZK7 142 aa5.58□□□□□ -1.52
HMGB3P8-201ENST00000449709 MINK1Q8N4C8 1332 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P8-201ENST00000449709 PTPREP23469 700 aa5.57□□□□□ -1.52
HMGB3P8-201ENST00000449709 ZDHHC16Q969W1 377 aa5.57□□□□□ -1.52
HMGB3P8-201ENST00000449709 FAM117AQ9C073 453 aa5.57□□□□□ -1.52
HMGB3P8-201ENST00000449709 PLEKHG3A1L390 1219 aa5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 BHMG1C9JSJ3 638 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 ZEB1P37275 1124 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 MAP2K5Q13163 448 aa5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 ZBED2Q9BTP6 218 aa5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 SLC4A5Q9BY07 1137 aa5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 PCDHGA10Q9Y5H3 936 aa5.55□□□□□ -1.52
HMGB3P8-201ENST00000449709 IRF6O14896 467 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 PTPN5P54829 565 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 AMHR2Q16671 573 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 CCDC102AQ96A19 550 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 DDRGK1Q96HY6 314 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 ANP32EQ9BTT0 268 aa5.54□□□□□ -1.52
HMGB3P8-201ENST00000449709 NISCHQ9Y2I1 1504 aa5.53□□□□□ -1.52
HMGB3P8-201ENST00000449709 GRXCR2A6NFK2 248 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 GNPATO15228 680 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 COL9A1P20849 921 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 OSBPP22059 807 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 PARP9Q8IXQ6 854 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 C1orf115Q9H7X2 142 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 PODXL2Q9NZ53 605 aa5.52□□□□□ -1.53
HMGB3P8-201ENST00000449709 NUTM2FA1L443 756 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 PROX2Q3B8N5 592 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 TYW1BQ6NUM6 668 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 THSD4Q6ZMP0 1018 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 MRPL50Q8N5N7 158 aaKnown RBP5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 WNT2BQ93097 391 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 GOPCQ9HD26 462 aa5.51□□□□□ -1.53
HMGB3P8-201ENST00000449709 GOLGA8CPA6NN73 597 aa5.5□□□□□ -1.53
HMGB3P8-201ENST00000449709 PPP1R3GB7ZBB8 358 aa5.5□□□□□ -1.53
HMGB3P8-201ENST00000449709 PHF14O94880 888 aa5.5□□□□□ -1.53
HMGB3P8-201ENST00000449709 FLIIQ13045 1269 aa5.5□□□□□ -1.53
HMGB3P8-201ENST00000449709 HIC1Q14526 733 aa5.5□□□□□ -1.53
HMGB3P8-201ENST00000449709 ONECUT3O60422 494 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 FCHSD2O94868 740 aa5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 FECHP22830 423 aa5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 NEUROD1Q13562 356 aa5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 FBXW7Q969H0 707 aa5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 NBPF3Q9H094 633 aa5.49□□□□□ -1.53
HMGB3P8-201ENST00000449709 UBE2Q2Q8WVN8 375 aa5.48□□□□□ -1.53
HMGB3P8-201ENST00000449709 RABGEF1Q9UJ41 708 aa5.48□□□□□ -1.53
HMGB3P8-201ENST00000449709 TRIM26Q12899 539 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P8-201ENST00000449709 C6orf132Q5T0Z8 1188 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms