RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 EMP3P54852 163 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 FOXK1P85037 733 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 TMC2Q8TDI7 906 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 HIC1Q14526 733 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 FCHSD2O94868 740 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 MCM6Q14566 821 aa9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
RAB28P3-201ENST00000448325 TRIM35Q9UPQ4 493 aa9.73□□□□□ -0.85
RAB28P3-201ENST00000448325 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
RAB28P3-201ENST00000448325 PLCG2P16885 1265 aa9.71□□□□□ -0.86
RAB28P3-201ENST00000448325 DDX12PQ92771 950 aa9.71□□□□□ -0.86
RAB28P3-201ENST00000448325 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
RAB28P3-201ENST00000448325 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 PTGDRQ13258 359 aa9.67□□□□□ -0.86
RAB28P3-201ENST00000448325 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
RAB28P3-201ENST00000448325 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
RAB28P3-201ENST00000448325 PTGER2P43116 358 aa9.65□□□□□ -0.86
RAB28P3-201ENST00000448325 KIF3CO14782 793 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
RAB28P3-201ENST00000448325 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 RAD21O60216 631 aa9.6□□□□□ -0.87
RAB28P3-201ENST00000448325 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
RAB28P3-201ENST00000448325 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 CLCN1P35523 988 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 EVI5O60447 810 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 COG6Q9Y2V7 657 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 TBC1D12O60347 775 aa9.55□□□□□ -0.88
RAB28P3-201ENST00000448325 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
RAB28P3-201ENST00000448325 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 NLRP7Q8WX94 980 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 G3V3G9 751 aa9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 IRF5Q13568 498 aa9.49□□□□□ -0.89
RAB28P3-201ENST00000448325 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
RAB28P3-201ENST00000448325 MAP3K7O43318 606 aa9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RGS22Q8NE09 1264 aa9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RFC5P40937 340 aa9.47□□□□□ -0.89
RAB28P3-201ENST00000448325 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
RAB28P3-201ENST00000448325 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
RAB28P3-201ENST00000448325 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 TMCO4Q5TGY1 634 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 PHF14O94880 888 aa9.43□□□□□ -0.9
RAB28P3-201ENST00000448325 METTL3Q86U44 580 aaKnown RBP9.43□□□□□ -0.9
RAB28P3-201ENST00000448325 EPAS1Q99814 870 aa9.42□□□□□ -0.9
RAB28P3-201ENST00000448325 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
RAB28P3-201ENST00000448325 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
RAB28P3-201ENST00000448325 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
RAB28P3-201ENST00000448325 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
RAB28P3-201ENST00000448325 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms