RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 EMP3P54852 163 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 FOXK1P85037 733 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 TMC2Q8TDI7 906 aa9.77□□□□□ -0.85
RAB28P3-201ENST00000448325 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 HIC1Q14526 733 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
RAB28P3-201ENST00000448325 FCHSD2O94868 740 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 CCDC9Q9Y3X0 531 aaKnown RBP9.75□□□□□ -0.85
RAB28P3-201ENST00000448325 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 MCM6Q14566 821 aa9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 REPIN1Q9BWE0 567 aaKnown RBP9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
RAB28P3-201ENST00000448325 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
RAB28P3-201ENST00000448325 TRIM35Q9UPQ4 493 aa9.73□□□□□ -0.85
RAB28P3-201ENST00000448325 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
RAB28P3-201ENST00000448325 PLCG2P16885 1265 aa9.71□□□□□ -0.86
RAB28P3-201ENST00000448325 DDX12PQ92771 950 aa9.71□□□□□ -0.86
RAB28P3-201ENST00000448325 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
RAB28P3-201ENST00000448325 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
RAB28P3-201ENST00000448325 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
RAB28P3-201ENST00000448325 PTGDRQ13258 359 aa9.67□□□□□ -0.86
RAB28P3-201ENST00000448325 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
RAB28P3-201ENST00000448325 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
RAB28P3-201ENST00000448325 PTGER2P43116 358 aa9.65□□□□□ -0.86
RAB28P3-201ENST00000448325 KIF3CO14782 793 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 PROCA1Q8NCQ7 364 aaPredicted RBP9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 TRAIPQ9BWF2 469 aa9.64□□□□□ -0.87
RAB28P3-201ENST00000448325 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
RAB28P3-201ENST00000448325 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
RAB28P3-201ENST00000448325 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
RAB28P3-201ENST00000448325 RAD21O60216 631 aa9.6□□□□□ -0.87
RAB28P3-201ENST00000448325 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
RAB28P3-201ENST00000448325 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 CLCN1P35523 988 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
RAB28P3-201ENST00000448325 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 EVI5O60447 810 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
RAB28P3-201ENST00000448325 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 COG6Q9Y2V7 657 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
RAB28P3-201ENST00000448325 TBC1D12O60347 775 aa9.55□□□□□ -0.88
RAB28P3-201ENST00000448325 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
RAB28P3-201ENST00000448325 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
RAB28P3-201ENST00000448325 SPDYE5A6NIY4 337 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 NLRP7Q8WX94 980 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
RAB28P3-201ENST00000448325 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
RAB28P3-201ENST00000448325 G3V3G9 751 aa9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
RAB28P3-201ENST00000448325 IRF5Q13568 498 aa9.49□□□□□ -0.89
RAB28P3-201ENST00000448325 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
RAB28P3-201ENST00000448325 MAP3K7O43318 606 aa9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RGS22Q8NE09 1264 aa9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
RAB28P3-201ENST00000448325 RFC5P40937 340 aa9.47□□□□□ -0.89
RAB28P3-201ENST00000448325 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
RAB28P3-201ENST00000448325 MTMR7Q9Y216 660 aa9.46□□□□□ -0.9
RAB28P3-201ENST00000448325 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 TMCO4Q5TGY1 634 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
RAB28P3-201ENST00000448325 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
RAB28P3-201ENST00000448325 PHF14O94880 888 aa9.43□□□□□ -0.9
RAB28P3-201ENST00000448325 METTL3Q86U44 580 aaKnown RBP9.43□□□□□ -0.9
RAB28P3-201ENST00000448325 EPAS1Q99814 870 aa9.42□□□□□ -0.9
RAB28P3-201ENST00000448325 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
RAB28P3-201ENST00000448325 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
RAB28P3-201ENST00000448325 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
RAB28P3-201ENST00000448325 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
RAB28P3-201ENST00000448325 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms