RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
RPE-209ENST00000438191 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
RPE-209ENST00000438191 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
RPE-209ENST00000438191 GGT6Q6P531 493 aa15.91■□□□□ 0.14
RPE-209ENST00000438191 FOXD1Q16676 465 aa15.9■□□□□ 0.14
RPE-209ENST00000438191 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
RPE-209ENST00000438191 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
RPE-209ENST00000438191 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
RPE-209ENST00000438191 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
RPE-209ENST00000438191 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
RPE-209ENST00000438191 KDM5DQ9BY66 1539 aa15.86■□□□□ 0.13
RPE-209ENST00000438191 RGS12O14924 1447 aa15.85■□□□□ 0.13
RPE-209ENST00000438191 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
RPE-209ENST00000438191 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
RPE-209ENST00000438191 A2MP01023 1474 aa15.84■□□□□ 0.13
RPE-209ENST00000438191 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
RPE-209ENST00000438191 NLRP1Q9C000 1473 aa15.84■□□□□ 0.13
RPE-209ENST00000438191 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
RPE-209ENST00000438191 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
RPE-209ENST00000438191 PZPP20742 1482 aa15.82■□□□□ 0.12
RPE-209ENST00000438191 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
RPE-209ENST00000438191 LRP5O75197 1615 aa15.81■□□□□ 0.12
RPE-209ENST00000438191 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
RPE-209ENST00000438191 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
RPE-209ENST00000438191 SPAG9O60271 1321 aaKnown RBP15.8■□□□□ 0.12
RPE-209ENST00000438191 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
RPE-209ENST00000438191 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
RPE-209ENST00000438191 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
RPE-209ENST00000438191 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
RPE-209ENST00000438191 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
RPE-209ENST00000438191 TMEM94Q12767 1356 aa15.79■□□□□ 0.12
RPE-209ENST00000438191 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
RPE-209ENST00000438191 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
RPE-209ENST00000438191 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
RPE-209ENST00000438191 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.11
RPE-209ENST00000438191 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
RPE-209ENST00000438191 CLIP1P30622 1438 aa15.76■□□□□ 0.11
RPE-209ENST00000438191 AFF2P51816 1311 aa15.74■□□□□ 0.11
RPE-209ENST00000438191 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
RPE-209ENST00000438191 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
RPE-209ENST00000438191 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
RPE-209ENST00000438191 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
RPE-209ENST00000438191 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.11
RPE-209ENST00000438191 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
RPE-209ENST00000438191 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
RPE-209ENST00000438191 HNRNPMP52272 730 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPE-209ENST00000438191 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
RPE-209ENST00000438191 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
RPE-209ENST00000438191 LTKP29376 864 aa15.67■□□□□ 0.1
RPE-209ENST00000438191 UBR1Q8IWV7 1749 aa15.66■□□□□ 0.1
RPE-209ENST00000438191 YY1P25490 414 aa15.66■□□□□ 0.1
RPE-209ENST00000438191 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
RPE-209ENST00000438191 CCDC125Q86Z20 511 aa15.65■□□□□ 0.1
RPE-209ENST00000438191 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
RPE-209ENST00000438191 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
RPE-209ENST00000438191 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
RPE-209ENST00000438191 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
RPE-209ENST00000438191 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
RPE-209ENST00000438191 KCNA6P17658 529 aa15.64■□□□□ 0.09
RPE-209ENST00000438191 MSH6P52701 1360 aa15.63■□□□□ 0.09
RPE-209ENST00000438191 DIP2AQ14689 1571 aa15.63■□□□□ 0.09
RPE-209ENST00000438191 SLIT1O75093 1534 aa15.63■□□□□ 0.09
RPE-209ENST00000438191 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
RPE-209ENST00000438191 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
RPE-209ENST00000438191 NWD1Q149M9 1564 aa15.62■□□□□ 0.09
RPE-209ENST00000438191 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
RPE-209ENST00000438191 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
RPE-209ENST00000438191 ABCC3O15438 1527 aa15.61■□□□□ 0.09
RPE-209ENST00000438191 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
RPE-209ENST00000438191 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
RPE-209ENST00000438191 KIAA1107Q9UPP5 1409 aa15.6■□□□□ 0.09
RPE-209ENST00000438191 KDM5AP29375 1690 aaKnown RBP15.59■□□□□ 0.09
RPE-209ENST00000438191 EP400Q96L91 3159 aa15.59■□□□□ 0.09
RPE-209ENST00000438191 KIF3BO15066 747 aa15.58■□□□□ 0.08
RPE-209ENST00000438191 FMN1Q68DA7 1419 aa15.58■□□□□ 0.08
RPE-209ENST00000438191 NKTRP30414 1462 aaKnown RBP15.58■□□□□ 0.08
RPE-209ENST00000438191 C8orf37Q96NL8 207 aa15.56■□□□□ 0.08
RPE-209ENST00000438191 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
RPE-209ENST00000438191 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
RPE-209ENST00000438191 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
RPE-209ENST00000438191 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
RPE-209ENST00000438191 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
RPE-209ENST00000438191 TET3O43151 1660 aa15.51■□□□□ 0.07
RPE-209ENST00000438191 HRCP23327 699 aa15.51■□□□□ 0.07
RPE-209ENST00000438191 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
RPE-209ENST00000438191 SENP3-EIF4A1A0A087X0R7 540 aa15.5■□□□□ 0.07
RPE-209ENST00000438191 BCL9LQ86UU0 1499 aa15.49■□□□□ 0.07
RPE-209ENST00000438191 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
RPE-209ENST00000438191 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
RPE-209ENST00000438191 DEFB132Q7Z7B7 95 aa15.48■□□□□ 0.07
RPE-209ENST00000438191 BLMP54132 1417 aaPredicted RBP15.48■□□□□ 0.07
RPE-209ENST00000438191 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
RPE-209ENST00000438191 SETD5Q9C0A6 1442 aa15.47■□□□□ 0.07
RPE-209ENST00000438191 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
RPE-209ENST00000438191 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
RPE-209ENST00000438191 TMEM2Q9UHN6 1383 aa15.46■□□□□ 0.07
RPE-209ENST00000438191 TRPC5Q9UL62 973 aaPredicted RBP15.45■□□□□ 0.06
RPE-209ENST00000438191 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
RPE-209ENST00000438191 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
RPE-209ENST00000438191 BRINP3Q76B58 766 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms