RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 MFSD10Q14728 455 aa8.64□□□□□ -1.03
SNRPEP4-201ENST00000435815 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
SNRPEP4-201ENST00000435815 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
SNRPEP4-201ENST00000435815 Q6ZNB5 142 aa8.63□□□□□ -1.03
SNRPEP4-201ENST00000435815 WBP1LQ9NX94 342 aa8.63□□□□□ -1.03
SNRPEP4-201ENST00000435815 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
SNRPEP4-201ENST00000435815 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
SNRPEP4-201ENST00000435815 CADPS2Q86UW7 1296 aa8.61□□□□□ -1.03
SNRPEP4-201ENST00000435815 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
SNRPEP4-201ENST00000435815 PHF14O94880 888 aa8.59□□□□□ -1.03
SNRPEP4-201ENST00000435815 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
SNRPEP4-201ENST00000435815 FBXW7Q969H0 707 aa8.58□□□□□ -1.04
SNRPEP4-201ENST00000435815 LCE2BO14633 110 aa8.57□□□□□ -1.04
SNRPEP4-201ENST00000435815 KCNC4Q03721 635 aa8.57□□□□□ -1.04
SNRPEP4-201ENST00000435815 C6orf132Q5T0Z8 1188 aa8.56□□□□□ -1.04
SNRPEP4-201ENST00000435815 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
SNRPEP4-201ENST00000435815 TRIM6-TRIM34B2RNG4 842 aa8.55□□□□□ -1.04
SNRPEP4-201ENST00000435815 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
SNRPEP4-201ENST00000435815 DPYSL4O14531 572 aa8.54□□□□□ -1.04
SNRPEP4-201ENST00000435815 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
SNRPEP4-201ENST00000435815 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
SNRPEP4-201ENST00000435815 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
SNRPEP4-201ENST00000435815 ONECUT3O60422 494 aaPredicted RBP8.51□□□□□ -1.05
SNRPEP4-201ENST00000435815 DDX12PQ92771 950 aa8.51□□□□□ -1.05
SNRPEP4-201ENST00000435815 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
SNRPEP4-201ENST00000435815 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
SNRPEP4-201ENST00000435815 EPAS1Q99814 870 aa8.5□□□□□ -1.05
SNRPEP4-201ENST00000435815 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
SNRPEP4-201ENST00000435815 GFRA3O60609 400 aa8.48□□□□□ -1.05
SNRPEP4-201ENST00000435815 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
SNRPEP4-201ENST00000435815 TSR1Q2NL82 804 aaKnown RBP8.48□□□□□ -1.05
SNRPEP4-201ENST00000435815 SMAPO00193 183 aa8.46□□□□□ -1.06
SNRPEP4-201ENST00000435815 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
SNRPEP4-201ENST00000435815 NBR1Q14596 966 aa8.45□□□□□ -1.06
SNRPEP4-201ENST00000435815 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
SNRPEP4-201ENST00000435815 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
SNRPEP4-201ENST00000435815 TRAF7Q6Q0C0 670 aa8.44□□□□□ -1.06
SNRPEP4-201ENST00000435815 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
SNRPEP4-201ENST00000435815 MAP3K7O43318 606 aa8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 PPP4CP60510 307 aa8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 FAM198AQ9UFP1 575 aa8.43□□□□□ -1.06
SNRPEP4-201ENST00000435815 PRIM1P49642 420 aaKnown RBP8.41□□□□□ -1.06
SNRPEP4-201ENST00000435815 PACS2Q86VP3 889 aa8.41□□□□□ -1.06
SNRPEP4-201ENST00000435815 MTRQ99707 1265 aa8.41□□□□□ -1.06
SNRPEP4-201ENST00000435815 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
SNRPEP4-201ENST00000435815 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
SNRPEP4-201ENST00000435815 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
SNRPEP4-201ENST00000435815 NRG2O14511 850 aaPredicted RBP8.37□□□□□ -1.07
SNRPEP4-201ENST00000435815 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
SNRPEP4-201ENST00000435815 RNF40O75150 1001 aa8.36□□□□□ -1.07
SNRPEP4-201ENST00000435815 PDIA6Q15084 440 aa8.36□□□□□ -1.07
SNRPEP4-201ENST00000435815 PRSS12P56730 875 aa8.35□□□□□ -1.07
SNRPEP4-201ENST00000435815 NKX2-3Q8TAU0 364 aa8.35□□□□□ -1.07
SNRPEP4-201ENST00000435815 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
SNRPEP4-201ENST00000435815 APLP1P51693 650 aa8.34□□□□□ -1.07
SNRPEP4-201ENST00000435815 TATDN2Q93075 761 aa8.34□□□□□ -1.07
SNRPEP4-201ENST00000435815 CDHR5Q9HBB8 845 aa8.34□□□□□ -1.07
SNRPEP4-201ENST00000435815 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
SNRPEP4-201ENST00000435815 V9GY48 417 aaPredicted RBP8.32□□□□□ -1.08
SNRPEP4-201ENST00000435815 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
SNRPEP4-201ENST00000435815 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
SNRPEP4-201ENST00000435815 NUDT18Q6ZVK8 323 aa8.31□□□□□ -1.08
SNRPEP4-201ENST00000435815 PDZRN3Q9UPQ7 1066 aa8.31□□□□□ -1.08
SNRPEP4-201ENST00000435815 COPS2P61201 443 aa8.29□□□□□ -1.08
SNRPEP4-201ENST00000435815 ZNF787Q6DD87 383 aa8.29□□□□□ -1.08
SNRPEP4-201ENST00000435815 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
SNRPEP4-201ENST00000435815 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
SNRPEP4-201ENST00000435815 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
SNRPEP4-201ENST00000435815 ZNF775Q96BV0 537 aaPredicted RBP8.25□□□□□ -1.09
SNRPEP4-201ENST00000435815 OSBPP22059 807 aa8.24□□□□□ -1.09
SNRPEP4-201ENST00000435815 PADI6Q6TGC4 694 aa8.23□□□□□ -1.09
SNRPEP4-201ENST00000435815 TRIM67Q6ZTA4 783 aa8.23□□□□□ -1.09
SNRPEP4-201ENST00000435815 EMID1Q96A84 441 aaPredicted RBP8.22□□□□□ -1.09
SNRPEP4-201ENST00000435815 E2F4Q16254 413 aa8.21□□□□□ -1.1
SNRPEP4-201ENST00000435815 TLL1O43897 1013 aa8.2□□□□□ -1.1
SNRPEP4-201ENST00000435815 GGCXP38435 758 aa8.2□□□□□ -1.1
SNRPEP4-201ENST00000435815 HDGFP51858 240 aaKnown RBP8.2□□□□□ -1.1
SNRPEP4-201ENST00000435815 TTC13Q8NBP0 860 aa8.2□□□□□ -1.1
SNRPEP4-201ENST00000435815 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
SNRPEP4-201ENST00000435815 ZPR1O75312 459 aa8.19□□□□□ -1.1
SNRPEP4-201ENST00000435815 SLF2Q8IX21 1173 aa8.19□□□□□ -1.1
SNRPEP4-201ENST00000435815 NPDC1Q9NQX5 325 aaPredicted RBP8.19□□□□□ -1.1
SNRPEP4-201ENST00000435815 POTECB2RU33 542 aa8.18□□□□□ -1.1
SNRPEP4-201ENST00000435815 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
SNRPEP4-201ENST00000435815 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
SNRPEP4-201ENST00000435815 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 SLC19A1P41440 591 aa8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 ARIH1Q9Y4X5 557 aaPredicted RBP8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
SNRPEP4-201ENST00000435815 MYT1Q01538 1121 aa8.15□□□□□ -1.1
SNRPEP4-201ENST00000435815 EYA1Q99502 592 aa8.15□□□□□ -1.1
SNRPEP4-201ENST00000435815 PKDCCQ504Y2 493 aa8.14□□□□□ -1.11
SNRPEP4-201ENST00000435815 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
SNRPEP4-201ENST00000435815 S1PR4O95977 384 aa8.12□□□□□ -1.11
SNRPEP4-201ENST00000435815 SPRYD7Q5W111 196 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms