RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
NUDCD1-202ENST00000427660 EPAS1Q99814 870 aa8.15□□□□□ -1.1
NUDCD1-202ENST00000427660 ZBTB7CA1YPR0 619 aa8.15□□□□□ -1.11
NUDCD1-202ENST00000427660 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.11
NUDCD1-202ENST00000427660 PTCD2Q8WV60 388 aaKnown RBP8.15□□□□□ -1.11
NUDCD1-202ENST00000427660 PLCG2P16885 1265 aa8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 ASTLQ6HA08 431 aaPredicted RBP8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 NPDC1Q9NQX5 325 aaPredicted RBP8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 ATMINO43313 823 aaPredicted RBP8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 PHF14O94880 888 aa8.14□□□□□ -1.11
NUDCD1-202ENST00000427660 GABBR2O75899 941 aa8.12□□□□□ -1.11
NUDCD1-202ENST00000427660 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
NUDCD1-202ENST00000427660 RAD21O60216 631 aa8.12□□□□□ -1.11
NUDCD1-202ENST00000427660 SLC34A2O95436 690 aa8.12□□□□□ -1.11
NUDCD1-202ENST00000427660 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
NUDCD1-202ENST00000427660 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
NUDCD1-202ENST00000427660 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
NUDCD1-202ENST00000427660 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
NUDCD1-202ENST00000427660 SERPINA10Q9UK55 444 aa8.1□□□□□ -1.11
NUDCD1-202ENST00000427660 MAP3K7O43318 606 aa8.1□□□□□ -1.11
NUDCD1-202ENST00000427660 BEGAINQ9BUH8 593 aa8.1□□□□□ -1.11
NUDCD1-202ENST00000427660 SPDYE5A6NIY4 337 aa8.09□□□□□ -1.11
NUDCD1-202ENST00000427660 PHOX2BQ99453 314 aa8.09□□□□□ -1.11
NUDCD1-202ENST00000427660 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
NUDCD1-202ENST00000427660 OATP04181 439 aa8.09□□□□□ -1.11
NUDCD1-202ENST00000427660 CCDC9Q9Y3X0 531 aaKnown RBP8.09□□□□□ -1.11
NUDCD1-202ENST00000427660 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
NUDCD1-202ENST00000427660 CCDC97Q96F63 343 aaPredicted RBP8.07□□□□□ -1.12
NUDCD1-202ENST00000427660 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
NUDCD1-202ENST00000427660 SLAIN1Q8ND83 568 aa8.07□□□□□ -1.12
NUDCD1-202ENST00000427660 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
NUDCD1-202ENST00000427660 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
NUDCD1-202ENST00000427660 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 CERKQ8TCT0 537 aa8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 TYW1BQ6NUM6 668 aa8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 FBXW7Q969H0 707 aa8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 TRAIPQ9BWF2 469 aa8.06□□□□□ -1.12
NUDCD1-202ENST00000427660 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
NUDCD1-202ENST00000427660 POM121Q96HA1 1249 aa8.05□□□□□ -1.12
NUDCD1-202ENST00000427660 PCDHGA10Q9Y5H3 936 aa8.05□□□□□ -1.12
NUDCD1-202ENST00000427660 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
NUDCD1-202ENST00000427660 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
NUDCD1-202ENST00000427660 ATP1B4Q9UN42 357 aaPredicted RBP8.04□□□□□ -1.12
NUDCD1-202ENST00000427660 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
NUDCD1-202ENST00000427660 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
NUDCD1-202ENST00000427660 TSR1Q2NL82 804 aaKnown RBP8.03□□□□□ -1.12
NUDCD1-202ENST00000427660 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
NUDCD1-202ENST00000427660 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
NUDCD1-202ENST00000427660 PXYLP1Q8TE99 480 aa8.02□□□□□ -1.12
NUDCD1-202ENST00000427660 RBM33Q96EV2 1170 aaKnown RBP8.02□□□□□ -1.12
NUDCD1-202ENST00000427660 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.12
NUDCD1-202ENST00000427660 SEC24BO95487 1268 aa8.02□□□□□ -1.13
NUDCD1-202ENST00000427660 TMEM259Q4ZIN3 620 aa8.02□□□□□ -1.13
NUDCD1-202ENST00000427660 JPH4Q96JJ6 628 aa8.01□□□□□ -1.13
NUDCD1-202ENST00000427660 DCBLD2Q96PD2 775 aa8.01□□□□□ -1.13
NUDCD1-202ENST00000427660 ADGRG1Q9Y653 693 aa8.01□□□□□ -1.13
NUDCD1-202ENST00000427660 RFC5P40937 340 aa8□□□□□ -1.13
NUDCD1-202ENST00000427660 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
NUDCD1-202ENST00000427660 SOCS7O14512 581 aa7.99□□□□□ -1.13
NUDCD1-202ENST00000427660 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
NUDCD1-202ENST00000427660 PADI6Q6TGC4 694 aa7.99□□□□□ -1.13
NUDCD1-202ENST00000427660 C3orf67Q6ZVT6 689 aa7.99□□□□□ -1.13
NUDCD1-202ENST00000427660 TTC13Q8NBP0 860 aa7.99□□□□□ -1.13
NUDCD1-202ENST00000427660 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
NUDCD1-202ENST00000427660 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
NUDCD1-202ENST00000427660 ZNF330Q9Y3S2 320 aaPredicted RBP7.98□□□□□ -1.13
NUDCD1-202ENST00000427660 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
NUDCD1-202ENST00000427660 WWC1Q8IX03 1113 aa7.97□□□□□ -1.13
NUDCD1-202ENST00000427660 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
NUDCD1-202ENST00000427660 PCDHGA4Q9Y5G9 962 aa7.96□□□□□ -1.13
NUDCD1-202ENST00000427660 FOSBP53539 338 aa7.96□□□□□ -1.14
NUDCD1-202ENST00000427660 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
NUDCD1-202ENST00000427660 RBM46Q8TBY0 533 aaKnown RBP7.96□□□□□ -1.14
NUDCD1-202ENST00000427660 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
NUDCD1-202ENST00000427660 PPP1R15AO75807 674 aaPredicted RBP7.95□□□□□ -1.14
NUDCD1-202ENST00000427660 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
NUDCD1-202ENST00000427660 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
NUDCD1-202ENST00000427660 PRM3Q9NNZ6 103 aa7.94□□□□□ -1.14
NUDCD1-202ENST00000427660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 LIMD1Q9UGP4 676 aa7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 C7P10643 843 aa7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 PDE4CQ08493 712 aa7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 ZDHHC16Q969W1 377 aa7.93□□□□□ -1.14
NUDCD1-202ENST00000427660 SPTLC1O15269 473 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 POTEIP0CG38 1075 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 GJA5P36382 358 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 PRSS12P56730 875 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 RETREG2Q8NC44 543 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 MTMR14Q8NCE2 650 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
NUDCD1-202ENST00000427660 PELP1Q8IZL8 1130 aaKnown RBP7.91□□□□□ -1.14
NUDCD1-202ENST00000427660 FBXO31Q5XUX0 539 aaPredicted RBP7.91□□□□□ -1.14
NUDCD1-202ENST00000427660 POTEFA5A3E0 1075 aa7.9□□□□□ -1.14
NUDCD1-202ENST00000427660 CD46P15529 392 aa7.9□□□□□ -1.14
NUDCD1-202ENST00000427660 SULF1Q8IWU6 871 aa7.9□□□□□ -1.14
NUDCD1-202ENST00000427660 GDPD2Q9HCC8 539 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms