RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 GGT6Q6P531 493 aa17.89■□□□□ 0.45
MCF2L-213ENST00000421756 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
MCF2L-213ENST00000421756 ABCC10Q5T3U5 1492 aa17.87■□□□□ 0.45
MCF2L-213ENST00000421756 EXOC6Q8TAG9 804 aa17.86■□□□□ 0.45
MCF2L-213ENST00000421756 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
MCF2L-213ENST00000421756 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
MCF2L-213ENST00000421756 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
MCF2L-213ENST00000421756 NBR1Q14596 966 aa17.86■□□□□ 0.45
MCF2L-213ENST00000421756 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
MCF2L-213ENST00000421756 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
MCF2L-213ENST00000421756 TMF1P82094 1093 aa17.85■□□□□ 0.45
MCF2L-213ENST00000421756 DISP3Q9P2K9 1392 aa17.84■□□□□ 0.45
MCF2L-213ENST00000421756 MBD5Q9P267 1494 aa17.84■□□□□ 0.45
MCF2L-213ENST00000421756 NEUROD2Q15784 382 aa17.83■□□□□ 0.45
MCF2L-213ENST00000421756 KNSTRNQ9Y448 316 aa17.83■□□□□ 0.45
MCF2L-213ENST00000421756 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.45
MCF2L-213ENST00000421756 ITSN2Q9NZM3 1697 aa17.82■□□□□ 0.44
MCF2L-213ENST00000421756 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
MCF2L-213ENST00000421756 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
MCF2L-213ENST00000421756 RSPH4AQ5TD94 716 aa17.81■□□□□ 0.44
MCF2L-213ENST00000421756 ABCA8O94911 1581 aa17.81■□□□□ 0.44
MCF2L-213ENST00000421756 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
MCF2L-213ENST00000421756 TRAPPC8Q9Y2L5 1435 aa17.8■□□□□ 0.44
MCF2L-213ENST00000421756 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
MCF2L-213ENST00000421756 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
MCF2L-213ENST00000421756 RALBP1Q15311 655 aa17.79■□□□□ 0.44
MCF2L-213ENST00000421756 FAM135AQ9P2D6 1515 aa17.79■□□□□ 0.44
MCF2L-213ENST00000421756 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
MCF2L-213ENST00000421756 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
MCF2L-213ENST00000421756 TESK2Q96S53 571 aa17.78■□□□□ 0.44
MCF2L-213ENST00000421756 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.43
MCF2L-213ENST00000421756 SCAPERQ9BY12 1400 aa17.77■□□□□ 0.43
MCF2L-213ENST00000421756 TMEM132EQ6IEE7 984 aa17.76■□□□□ 0.43
MCF2L-213ENST00000421756 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
MCF2L-213ENST00000421756 NPM1P06748 294 aaKnown RBP eCLIP17.75■□□□□ 0.43
MCF2L-213ENST00000421756 MYT1Q01538 1121 aa17.75■□□□□ 0.43
MCF2L-213ENST00000421756 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
MCF2L-213ENST00000421756 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
MCF2L-213ENST00000421756 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
MCF2L-213ENST00000421756 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-213ENST00000421756 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
MCF2L-213ENST00000421756 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
MCF2L-213ENST00000421756 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
MCF2L-213ENST00000421756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.43
MCF2L-213ENST00000421756 ADGBQ8N7X0 1667 aa17.71■□□□□ 0.43
MCF2L-213ENST00000421756 A2MP01023 1474 aa17.71■□□□□ 0.43
MCF2L-213ENST00000421756 KDM5CP41229 1560 aa17.7■□□□□ 0.42
MCF2L-213ENST00000421756 C20orf194Q5TEA3 1177 aa17.7■□□□□ 0.42
MCF2L-213ENST00000421756 STK26Q9P289 416 aa17.7■□□□□ 0.42
MCF2L-213ENST00000421756 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-213ENST00000421756 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
MCF2L-213ENST00000421756 ADGRF5Q8IZF2 1346 aa17.69■□□□□ 0.42
MCF2L-213ENST00000421756 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
MCF2L-213ENST00000421756 CHD1O14646 1710 aa17.69■□□□□ 0.42
MCF2L-213ENST00000421756 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
MCF2L-213ENST00000421756 CRBNQ96SW2 442 aa17.68■□□□□ 0.42
MCF2L-213ENST00000421756 ERBINQ96RT1 1412 aa17.68■□□□□ 0.42
MCF2L-213ENST00000421756 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-213ENST00000421756 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-213ENST00000421756 UHRF1BP1Q6BDS2 1440 aa17.66■□□□□ 0.42
MCF2L-213ENST00000421756 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
MCF2L-213ENST00000421756 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
MCF2L-213ENST00000421756 APAF1O14727 1248 aa17.65■□□□□ 0.42
MCF2L-213ENST00000421756 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
MCF2L-213ENST00000421756 SHANK2Q9UPX8 1470 aa17.65■□□□□ 0.42
MCF2L-213ENST00000421756 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
MCF2L-213ENST00000421756 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
MCF2L-213ENST00000421756 CFAP65Q6ZU64 1925 aaKnown RBP17.63■□□□□ 0.41
MCF2L-213ENST00000421756 ADCY10Q96PN6 1610 aa17.63■□□□□ 0.41
MCF2L-213ENST00000421756 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
MCF2L-213ENST00000421756 PLCH2O75038 1416 aa17.62■□□□□ 0.41
MCF2L-213ENST00000421756 RGS3P49796 1198 aa17.62■□□□□ 0.41
MCF2L-213ENST00000421756 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
MCF2L-213ENST00000421756 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
MCF2L-213ENST00000421756 MLECQ14165 292 aa17.61■□□□□ 0.41
MCF2L-213ENST00000421756 LAS1LQ9Y4W2 734 aaKnown RBP17.61■□□□□ 0.41
MCF2L-213ENST00000421756 KANK1Q14678 1352 aa17.6■□□□□ 0.41
MCF2L-213ENST00000421756 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
MCF2L-213ENST00000421756 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
MCF2L-213ENST00000421756 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-213ENST00000421756 ABCC2Q92887 1545 aa17.58■□□□□ 0.4
MCF2L-213ENST00000421756 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
MCF2L-213ENST00000421756 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
MCF2L-213ENST00000421756 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
MCF2L-213ENST00000421756 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-213ENST00000421756 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
MCF2L-213ENST00000421756 UGGT1Q9NYU2 1555 aa17.57■□□□□ 0.4
MCF2L-213ENST00000421756 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
MCF2L-213ENST00000421756 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
MCF2L-213ENST00000421756 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
MCF2L-213ENST00000421756 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-213ENST00000421756 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
MCF2L-213ENST00000421756 BCAR3O75815 825 aa17.55■□□□□ 0.4
MCF2L-213ENST00000421756 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-213ENST00000421756 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
MCF2L-213ENST00000421756 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
MCF2L-213ENST00000421756 FANCAO15360 1455 aa17.54■□□□□ 0.4
MCF2L-213ENST00000421756 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-213ENST00000421756 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
MCF2L-213ENST00000421756 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms