RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 CCDC43Q96MW1 224 aaKnown RBP14.47□□□□□ -0.09
PBX1-203ENST00000420696 DDX11L8A8MPP1 907 aa14.46□□□□□ -0.09
PBX1-203ENST00000420696 TRIM34Q9BYJ4 488 aa14.46□□□□□ -0.09
PBX1-203ENST00000420696 ITPRIPQ8IWB1 547 aa14.46□□□□□ -0.09
PBX1-203ENST00000420696 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.09
PBX1-203ENST00000420696 SKOR2Q2VWA4 1001 aaPredicted RBP14.46□□□□□ -0.1
PBX1-203ENST00000420696 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
PBX1-203ENST00000420696 TIMELESSQ9UNS1 1208 aa14.45□□□□□ -0.1
PBX1-203ENST00000420696 PCMTD1Q96MG8 357 aaPredicted RBP14.45□□□□□ -0.1
PBX1-203ENST00000420696 SLKQ9H2G2 1235 aaPredicted RBP14.45□□□□□ -0.1
PBX1-203ENST00000420696 ARGLU1Q9NWB6 273 aaPredicted RBP14.45□□□□□ -0.1
PBX1-203ENST00000420696 MYO6Q9UM54 1294 aa14.45□□□□□ -0.1
PBX1-203ENST00000420696 TRIM29Q14134 588 aa14.44□□□□□ -0.1
PBX1-203ENST00000420696 HSP90B2PQ58FF3 399 aa14.44□□□□□ -0.1
PBX1-203ENST00000420696 NEXNQ0ZGT2 675 aa14.44□□□□□ -0.1
PBX1-203ENST00000420696 SMC4Q9NTJ3 1288 aa14.43□□□□□ -0.1
PBX1-203ENST00000420696 RSPH6AQ9H0K4 717 aa14.42□□□□□ -0.1
PBX1-203ENST00000420696 ZNF771Q7L3S4 317 aaPredicted RBP14.42□□□□□ -0.1
PBX1-203ENST00000420696 U2AF1L5P0DN76 240 aaPredicted RBP14.42□□□□□ -0.1
PBX1-203ENST00000420696 U2AF1Q01081 240 aaKnown RBP eCLIP14.42□□□□□ -0.1
PBX1-203ENST00000420696 CWC22Q9HCG8 908 aaKnown RBP14.41□□□□□ -0.1
PBX1-203ENST00000420696 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
PBX1-203ENST00000420696 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
PBX1-203ENST00000420696 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
PBX1-203ENST00000420696 CLIP1P30622 1438 aa14.39□□□□□ -0.11
PBX1-203ENST00000420696 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
PBX1-203ENST00000420696 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
PBX1-203ENST00000420696 MFAP1P55081 439 aaKnown RBP14.38□□□□□ -0.11
PBX1-203ENST00000420696 MAP7D2Q96T17 732 aa14.38□□□□□ -0.11
PBX1-203ENST00000420696 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
PBX1-203ENST00000420696 OFD1O75665 1012 aa14.37□□□□□ -0.11
PBX1-203ENST00000420696 SENP3-EIF4A1A0A087X0R7 540 aa14.37□□□□□ -0.11
PBX1-203ENST00000420696 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
PBX1-203ENST00000420696 ANKRD18AQ8IVF6 992 aa14.36□□□□□ -0.11
PBX1-203ENST00000420696 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
PBX1-203ENST00000420696 CPLX1O14810 134 aa14.35□□□□□ -0.11
PBX1-203ENST00000420696 ZKSCAN1P17029 563 aaPredicted RBP14.35□□□□□ -0.11
PBX1-203ENST00000420696 CWC15Q9P013 229 aaKnown RBP14.35□□□□□ -0.11
PBX1-203ENST00000420696 H0YHG0 523 aa14.35□□□□□ -0.11
PBX1-203ENST00000420696 WWC2Q6AWC2 1192 aa14.35□□□□□ -0.11
PBX1-203ENST00000420696 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
PBX1-203ENST00000420696 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
PBX1-203ENST00000420696 RALBP1Q15311 655 aa14.34□□□□□ -0.11
PBX1-203ENST00000420696 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
PBX1-203ENST00000420696 MNS1Q8NEH6 495 aa14.34□□□□□ -0.11
PBX1-203ENST00000420696 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
PBX1-203ENST00000420696 TRDNQ13061 729 aa14.34□□□□□ -0.11
PBX1-203ENST00000420696 DHX16O60231 1041 aaKnown RBP14.33□□□□□ -0.12
PBX1-203ENST00000420696 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
PBX1-203ENST00000420696 EZRP15311 586 aaKnown RBP14.32□□□□□ -0.12
PBX1-203ENST00000420696 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
PBX1-203ENST00000420696 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
PBX1-203ENST00000420696 TRHP20396 242 aaPredicted RBP14.32□□□□□ -0.12
PBX1-203ENST00000420696 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
PBX1-203ENST00000420696 ZFYVE27Q5T4F4 411 aa14.31□□□□□ -0.12
PBX1-203ENST00000420696 GOLGA6L7A0A1B0GV03 622 aa14.31□□□□□ -0.12
PBX1-203ENST00000420696 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
PBX1-203ENST00000420696 SLC4A10Q6U841 1118 aa14.31□□□□□ -0.12
PBX1-203ENST00000420696 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
PBX1-203ENST00000420696 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
PBX1-203ENST00000420696 PDE3BQ13370 1112 aa14.3□□□□□ -0.12
PBX1-203ENST00000420696 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
PBX1-203ENST00000420696 ZNF592Q92610 1267 aa14.29□□□□□ -0.12
PBX1-203ENST00000420696 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
PBX1-203ENST00000420696 WASHC2AQ641Q2 1341 aa14.29□□□□□ -0.12
PBX1-203ENST00000420696 ERICH2A1L162 156 aa14.29□□□□□ -0.12
PBX1-203ENST00000420696 REC8O95072 547 aa14.28□□□□□ -0.12
PBX1-203ENST00000420696 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
PBX1-203ENST00000420696 STK11IPQ8N1F8 1099 aa14.28□□□□□ -0.12
PBX1-203ENST00000420696 EIF3AQ14152 1382 aaKnown RBP14.27□□□□□ -0.12
PBX1-203ENST00000420696 RAD21O60216 631 aa14.27□□□□□ -0.12
PBX1-203ENST00000420696 AMPHP49418 695 aa14.27□□□□□ -0.12
PBX1-203ENST00000420696 IPO9Q96P70 1041 aaKnown RBP14.27□□□□□ -0.12
PBX1-203ENST00000420696 EID1Q9Y6B2 187 aa14.27□□□□□ -0.12
PBX1-203ENST00000420696 EEA1Q15075 1411 aa14.27□□□□□ -0.13
PBX1-203ENST00000420696 MLECQ14165 292 aa14.27□□□□□ -0.13
PBX1-203ENST00000420696 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
PBX1-203ENST00000420696 EPS15P42566 896 aa14.26□□□□□ -0.13
PBX1-203ENST00000420696 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
PBX1-203ENST00000420696 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
PBX1-203ENST00000420696 CCNB3Q8WWL7 1395 aa14.26□□□□□ -0.13
PBX1-203ENST00000420696 ERLIN2O94905 339 aa14.26□□□□□ -0.13
PBX1-203ENST00000420696 SAFB2Q14151 953 aaKnown RBP eCLIP14.26□□□□□ -0.13
PBX1-203ENST00000420696 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.26□□□□□ -0.13
PBX1-203ENST00000420696 CCDC66A2RUB6 948 aa14.25□□□□□ -0.13
PBX1-203ENST00000420696 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
PBX1-203ENST00000420696 NGDNQ8NEJ9 315 aaKnown RBP14.25□□□□□ -0.13
PBX1-203ENST00000420696 CENPJQ9HC77 1338 aaPredicted RBP14.25□□□□□ -0.13
PBX1-203ENST00000420696 BICD2Q8TD16 824 aa14.25□□□□□ -0.13
PBX1-203ENST00000420696 BRMS1Q9HCU9 246 aa14.25□□□□□ -0.13
PBX1-203ENST00000420696 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
PBX1-203ENST00000420696 DHX8Q14562 1220 aaKnown RBP14.25□□□□□ -0.13
PBX1-203ENST00000420696 NEFHP12036 1026 aa14.24□□□□□ -0.13
PBX1-203ENST00000420696 XBP1P17861 261 aa14.24□□□□□ -0.13
PBX1-203ENST00000420696 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
PBX1-203ENST00000420696 NAT10Q9H0A0 1025 aaKnown RBP14.24□□□□□ -0.13
PBX1-203ENST00000420696 VPS37DQ86XT2 251 aa14.24□□□□□ -0.13
PBX1-203ENST00000420696 SASS6Q6UVJ0 657 aa14.24□□□□□ -0.13
PBX1-203ENST00000420696 APPP05067 770 aa14.23□□□□□ -0.13
PBX1-203ENST00000420696 STK26Q9P289 416 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms