RNA–Protein interactions for RNA: ENST00000404898.5

CACNA1I-203, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1I, Length 9,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-203ENST00000404898 NEUROD2Q15784 382 aa18.17■□□□□ 0.5
CACNA1I-203ENST00000404898 POGKQ9P215 609 aa18.17■□□□□ 0.5
CACNA1I-203ENST00000404898 ITPRIPQ8IWB1 547 aa18.17■□□□□ 0.5
CACNA1I-203ENST00000404898 H3BQV1 296 aa18.16■□□□□ 0.5
CACNA1I-203ENST00000404898 IFFO2Q5TF58 517 aa18.16■□□□□ 0.5
CACNA1I-203ENST00000404898 DDX49Q9Y6V7 483 aaKnown RBP18.16■□□□□ 0.5
CACNA1I-203ENST00000404898 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
CACNA1I-203ENST00000404898 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
CACNA1I-203ENST00000404898 CCDC47Q96A33 483 aaKnown RBP18.15■□□□□ 0.5
CACNA1I-203ENST00000404898 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
CACNA1I-203ENST00000404898 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNA1I-203ENST00000404898 FAM13BQ9NYF5 915 aa18.14■□□□□ 0.49
CACNA1I-203ENST00000404898 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
CACNA1I-203ENST00000404898 U2SURPO15042 1029 aaKnown RBP18.14■□□□□ 0.49
CACNA1I-203ENST00000404898 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
CACNA1I-203ENST00000404898 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 LETM1O95202 739 aaPredicted RBP18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
CACNA1I-203ENST00000404898 TXLNBQ8N3L3 684 aa18.12■□□□□ 0.49
CACNA1I-203ENST00000404898 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
CACNA1I-203ENST00000404898 TMX4Q9H1E5 349 aaPredicted RBP18.11■□□□□ 0.49
CACNA1I-203ENST00000404898 TAOK2Q9UL54 1235 aa18.11■□□□□ 0.49
CACNA1I-203ENST00000404898 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
CACNA1I-203ENST00000404898 PES1O00541 588 aaKnown RBP18.11■□□□□ 0.49
CACNA1I-203ENST00000404898 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
CACNA1I-203ENST00000404898 MFAP1P55081 439 aaKnown RBP18.1■□□□□ 0.49
CACNA1I-203ENST00000404898 CPLX2Q6PUV4 134 aaKnown RBP18.1■□□□□ 0.49
CACNA1I-203ENST00000404898 NEFHP12036 1026 aa18.1■□□□□ 0.49
CACNA1I-203ENST00000404898 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
CACNA1I-203ENST00000404898 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
CACNA1I-203ENST00000404898 NUCB2P80303 420 aa18.09■□□□□ 0.49
CACNA1I-203ENST00000404898 CGNL1Q0VF96 1302 aa18.09■□□□□ 0.49
CACNA1I-203ENST00000404898 DEF6Q9H4E7 631 aa18.09■□□□□ 0.49
CACNA1I-203ENST00000404898 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
CACNA1I-203ENST00000404898 KIAA0754O94854 1291 aa18.08■□□□□ 0.49
CACNA1I-203ENST00000404898 WWC1Q8IX03 1113 aa18.08■□□□□ 0.49
CACNA1I-203ENST00000404898 DYDC1Q8WWB3 177 aa18.08■□□□□ 0.48
CACNA1I-203ENST00000404898 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
CACNA1I-203ENST00000404898 ZBTB7CA1YPR0 619 aa18.08■□□□□ 0.48
CACNA1I-203ENST00000404898 PATL2C9JE40 543 aaKnown RBP18.07■□□□□ 0.48
CACNA1I-203ENST00000404898 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
CACNA1I-203ENST00000404898 GOLGA6L10A6NI86 522 aa18.07■□□□□ 0.48
CACNA1I-203ENST00000404898 MRE11P49959 708 aa18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 TSHZ2Q9NRE2 1034 aa18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 RUFY2Q8WXA3 655 aa18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 IQCEQ6IPM2 695 aa18.06■□□□□ 0.48
CACNA1I-203ENST00000404898 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
CACNA1I-203ENST00000404898 FAM184AQ8NB25 1140 aa18.04■□□□□ 0.48
CACNA1I-203ENST00000404898 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
CACNA1I-203ENST00000404898 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
CACNA1I-203ENST00000404898 EIF3JO75822 258 aaKnown RBP18.04■□□□□ 0.48
CACNA1I-203ENST00000404898 ZNF592Q92610 1267 aa18.03■□□□□ 0.48
CACNA1I-203ENST00000404898 RABEP1Q15276 862 aa18.03■□□□□ 0.48
CACNA1I-203ENST00000404898 ERLIN2O94905 339 aa18.03■□□□□ 0.48
CACNA1I-203ENST00000404898 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
CACNA1I-203ENST00000404898 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
CACNA1I-203ENST00000404898 ZKSCAN1P17029 563 aaPredicted RBP18.02■□□□□ 0.47
CACNA1I-203ENST00000404898 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.47
CACNA1I-203ENST00000404898 IFT57Q9NWB7 429 aa18.02■□□□□ 0.47
CACNA1I-203ENST00000404898 PDCL2Q8N4E4 241 aa18.01■□□□□ 0.47
CACNA1I-203ENST00000404898 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
CACNA1I-203ENST00000404898 FAM107BQ9H098 131 aa18.01■□□□□ 0.47
CACNA1I-203ENST00000404898 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
CACNA1I-203ENST00000404898 RNF20Q5VTR2 975 aa18■□□□□ 0.47
CACNA1I-203ENST00000404898 MBD3O95983 291 aa18■□□□□ 0.47
CACNA1I-203ENST00000404898 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
CACNA1I-203ENST00000404898 TRIM29Q14134 588 aa18■□□□□ 0.47
CACNA1I-203ENST00000404898 CREBRFQ8IUR6 639 aa18■□□□□ 0.47
CACNA1I-203ENST00000404898 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
CACNA1I-203ENST00000404898 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
CACNA1I-203ENST00000404898 PIP4K2AP48426 406 aaPredicted RBP17.99■□□□□ 0.47
CACNA1I-203ENST00000404898 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
CACNA1I-203ENST00000404898 ERLIN1O75477 346 aa17.98■□□□□ 0.47
CACNA1I-203ENST00000404898 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.471e-6■■■■■ 58.5
CACNA1I-203ENST00000404898 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
CACNA1I-203ENST00000404898 EZRP15311 586 aaKnown RBP17.98■□□□□ 0.47
CACNA1I-203ENST00000404898 RGL3Q3MIN7 710 aa17.98■□□□□ 0.47
CACNA1I-203ENST00000404898 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
CACNA1I-203ENST00000404898 CHMP7Q8WUX9 453 aaPredicted RBP17.97■□□□□ 0.47
CACNA1I-203ENST00000404898 MARCH6O60337 910 aa17.97■□□□□ 0.47
CACNA1I-203ENST00000404898 ODF2Q5BJF6 829 aa17.96■□□□□ 0.47
CACNA1I-203ENST00000404898 PDIA4P13667 645 aaKnown RBP17.95■□□□□ 0.46
CACNA1I-203ENST00000404898 CCDC73Q6ZRK6 1079 aa17.95■□□□□ 0.46
CACNA1I-203ENST00000404898 CT47A1Q5JQC4 288 aaPredicted RBP17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 SMARCE1Q969G3 411 aa17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 AMOTL1Q8IY63 956 aa17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 DDX11Q96FC9 970 aa17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 PDCP20941 246 aa17.94■□□□□ 0.46
CACNA1I-203ENST00000404898 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
CACNA1I-203ENST00000404898 OLFM4Q6UX06 510 aa17.93■□□□□ 0.46
CACNA1I-203ENST00000404898 PCMTD1Q96MG8 357 aaPredicted RBP17.92■□□□□ 0.46
CACNA1I-203ENST00000404898 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
CACNA1I-203ENST00000404898 KIF2AO00139 706 aaPredicted RBP17.91■□□□□ 0.46
CACNA1I-203ENST00000404898 PDE4AP27815 886 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms