RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
HMGB1P10-201ENST00000395823 MAP3K7O43318 606 aa9.78□□□□□ -0.84
HMGB1P10-201ENST00000395823 RBM33Q96EV2 1170 aaKnown RBP9.78□□□□□ -0.84
HMGB1P10-201ENST00000395823 GOPCQ9HD26 462 aa9.77□□□□□ -0.85
HMGB1P10-201ENST00000395823 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
HMGB1P10-201ENST00000395823 SLAIN1Q8ND83 568 aa9.76□□□□□ -0.85
HMGB1P10-201ENST00000395823 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P10-201ENST00000395823 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
HMGB1P10-201ENST00000395823 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
HMGB1P10-201ENST00000395823 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P10-201ENST00000395823 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
HMGB1P10-201ENST00000395823 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
HMGB1P10-201ENST00000395823 CLCN1P35523 988 aa9.71□□□□□ -0.86
HMGB1P10-201ENST00000395823 FOSBP53539 338 aa9.71□□□□□ -0.86
HMGB1P10-201ENST00000395823 GPCPD1Q9NPB8 672 aa9.71□□□□□ -0.86
HMGB1P10-201ENST00000395823 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
HMGB1P10-201ENST00000395823 FBXW7Q969H0 707 aa9.7□□□□□ -0.86
HMGB1P10-201ENST00000395823 C1orf115Q9H7X2 142 aa9.7□□□□□ -0.86
HMGB1P10-201ENST00000395823 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
HMGB1P10-201ENST00000395823 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
HMGB1P10-201ENST00000395823 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
HMGB1P10-201ENST00000395823 PADI6Q6TGC4 694 aa9.68□□□□□ -0.86
HMGB1P10-201ENST00000395823 FLIIQ13045 1269 aa9.67□□□□□ -0.86
HMGB1P10-201ENST00000395823 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
HMGB1P10-201ENST00000395823 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
HMGB1P10-201ENST00000395823 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
HMGB1P10-201ENST00000395823 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P10-201ENST00000395823 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
HMGB1P10-201ENST00000395823 FAM217BQ9NTX9 383 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P10-201ENST00000395823 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
HMGB1P10-201ENST00000395823 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P10-201ENST00000395823 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
HMGB1P10-201ENST00000395823 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGB1P10-201ENST00000395823 BEGAINQ9BUH8 593 aa9.64□□□□□ -0.87
HMGB1P10-201ENST00000395823 ADAM33Q9BZ11 813 aa9.64□□□□□ -0.87
HMGB1P10-201ENST00000395823 OATP04181 439 aa9.63□□□□□ -0.87
HMGB1P10-201ENST00000395823 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
HMGB1P10-201ENST00000395823 POTEHQ6S545 545 aa9.63□□□□□ -0.87
HMGB1P10-201ENST00000395823 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
HMGB1P10-201ENST00000395823 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
HMGB1P10-201ENST00000395823 NUDT7P0C024 238 aa9.62□□□□□ -0.87
HMGB1P10-201ENST00000395823 SKIV2LQ15477 1246 aaKnown RBP9.62□□□□□ -0.87
HMGB1P10-201ENST00000395823 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
HMGB1P10-201ENST00000395823 MCM6Q14566 821 aa9.61□□□□□ -0.87
HMGB1P10-201ENST00000395823 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P10-201ENST00000395823 RBM27Q9P2N5 1060 aaKnown RBP9.61□□□□□ -0.87
HMGB1P10-201ENST00000395823 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
HMGB1P10-201ENST00000395823 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
HMGB1P10-201ENST00000395823 CLUAP1Q96AJ1 413 aa9.59□□□□□ -0.87
HMGB1P10-201ENST00000395823 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
HMGB1P10-201ENST00000395823 PRSS12P56730 875 aa9.58□□□□□ -0.88
HMGB1P10-201ENST00000395823 MYSM1Q5VVJ2 828 aa9.58□□□□□ -0.88
HMGB1P10-201ENST00000395823 GPR153Q6NV75 609 aa9.58□□□□□ -0.88
HMGB1P10-201ENST00000395823 A6NJR5 290 aa9.57□□□□□ -0.88
HMGB1P10-201ENST00000395823 SP7Q8TDD2 431 aaPredicted RBP9.57□□□□□ -0.88
HMGB1P10-201ENST00000395823 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGB1P10-201ENST00000395823 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
HMGB1P10-201ENST00000395823 DOK7Q18PE1 504 aa9.56□□□□□ -0.88
HMGB1P10-201ENST00000395823 CDCA7LQ96GN5 454 aa9.56□□□□□ -0.88
HMGB1P10-201ENST00000395823 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
HMGB1P10-201ENST00000395823 APBB1O00213 710 aa9.55□□□□□ -0.88
HMGB1P10-201ENST00000395823 COL9A1P20849 921 aa9.55□□□□□ -0.88
HMGB1P10-201ENST00000395823 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P10-201ENST00000395823 ARID3AQ99856 593 aa9.55□□□□□ -0.88
HMGB1P10-201ENST00000395823 C3orf80F5H4A9 247 aa9.54□□□□□ -0.88
HMGB1P10-201ENST00000395823 TRAK2O60296 914 aa9.54□□□□□ -0.88
HMGB1P10-201ENST00000395823 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
HMGB1P10-201ENST00000395823 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
HMGB1P10-201ENST00000395823 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.89
HMGB1P10-201ENST00000395823 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
HMGB1P10-201ENST00000395823 EYA1Q99502 592 aa9.52□□□□□ -0.89
HMGB1P10-201ENST00000395823 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
HMGB1P10-201ENST00000395823 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
HMGB1P10-201ENST00000395823 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
HMGB1P10-201ENST00000395823 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
HMGB1P10-201ENST00000395823 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
HMGB1P10-201ENST00000395823 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
HMGB1P10-201ENST00000395823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
HMGB1P10-201ENST00000395823 CD46P15529 392 aa9.48□□□□□ -0.89
HMGB1P10-201ENST00000395823 FNBP4Q8N3X1 1017 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P10-201ENST00000395823 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
HMGB1P10-201ENST00000395823 RFC5P40937 340 aa9.47□□□□□ -0.89
HMGB1P10-201ENST00000395823 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
HMGB1P10-201ENST00000395823 CCDC82Q8N4S0 544 aa9.47□□□□□ -0.89
HMGB1P10-201ENST00000395823 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
HMGB1P10-201ENST00000395823 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
HMGB1P10-201ENST00000395823 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
HMGB1P10-201ENST00000395823 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
HMGB1P10-201ENST00000395823 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
HMGB1P10-201ENST00000395823 PPP2R2DQ66LE6 453 aa9.45□□□□□ -0.9
HMGB1P10-201ENST00000395823 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P10-201ENST00000395823 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
HMGB1P10-201ENST00000395823 NUDT18Q6ZVK8 323 aa9.44□□□□□ -0.9
HMGB1P10-201ENST00000395823 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
HMGB1P10-201ENST00000395823 SPTLC1O15269 473 aa9.43□□□□□ -0.9
HMGB1P10-201ENST00000395823 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
HMGB1P10-201ENST00000395823 ZNF710Q8N1W2 664 aa9.43□□□□□ -0.9
HMGB1P10-201ENST00000395823 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
HMGB1P10-201ENST00000395823 TMEM134Q9H6X4 195 aa9.43□□□□□ -0.9
HMGB1P10-201ENST00000395823 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms