RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 PHF23Q9BUL5 403 aaPredicted RBP11.76□□□□□ -0.53
FAM49A-201ENST00000381323 TIAM1Q13009 1591 aa11.76□□□□□ -0.53
FAM49A-201ENST00000381323 SETD1BQ9UPS6 1966 aaKnown RBP11.75□□□□□ -0.53
FAM49A-201ENST00000381323 KDM5CP41229 1560 aa11.75□□□□□ -0.53
FAM49A-201ENST00000381323 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
FAM49A-201ENST00000381323 AGLP35573 1532 aa11.74□□□□□ -0.53
FAM49A-201ENST00000381323 ZNF326Q5BKZ1 582 aaKnown RBP11.74□□□□□ -0.53
FAM49A-201ENST00000381323 CDC42BPBQ9Y5S2 1711 aa11.74□□□□□ -0.53
FAM49A-201ENST00000381323 FAM135AQ9P2D6 1515 aa11.73□□□□□ -0.53
FAM49A-201ENST00000381323 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
FAM49A-201ENST00000381323 NPATQ14207 1427 aa11.73□□□□□ -0.53
FAM49A-201ENST00000381323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
FAM49A-201ENST00000381323 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
FAM49A-201ENST00000381323 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
FAM49A-201ENST00000381323 ABCA6Q8N139 1617 aa11.71□□□□□ -0.53
FAM49A-201ENST00000381323 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
FAM49A-201ENST00000381323 MBD5Q9P267 1494 aa11.68□□□□□ -0.54
FAM49A-201ENST00000381323 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
FAM49A-201ENST00000381323 PTPRTO14522 1441 aa11.66□□□□□ -0.54
FAM49A-201ENST00000381323 KIDINS220Q9ULH0 1771 aa11.66□□□□□ -0.54
FAM49A-201ENST00000381323 SLC52A1Q9NWF4 448 aa11.65□□□□□ -0.54
FAM49A-201ENST00000381323 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
FAM49A-201ENST00000381323 PTPRKQ15262 1439 aa11.65□□□□□ -0.54
FAM49A-201ENST00000381323 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
FAM49A-201ENST00000381323 PREX1Q8TCU6 1659 aa11.64□□□□□ -0.55
FAM49A-201ENST00000381323 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
FAM49A-201ENST00000381323 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
FAM49A-201ENST00000381323 NUP155O75694 1391 aa11.64□□□□□ -0.55
FAM49A-201ENST00000381323 MAP3K1Q13233 1512 aa11.64□□□□□ -0.55
FAM49A-201ENST00000381323 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
FAM49A-201ENST00000381323 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
FAM49A-201ENST00000381323 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
FAM49A-201ENST00000381323 DAPK1P53355 1430 aa11.63□□□□□ -0.55
FAM49A-201ENST00000381323 KDM5DQ9BY66 1539 aa11.63□□□□□ -0.55
FAM49A-201ENST00000381323 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
FAM49A-201ENST00000381323 ANKRD50Q9ULJ7 1429 aa11.63□□□□□ -0.55
FAM49A-201ENST00000381323 DUOX2Q9NRD8 1548 aa11.62□□□□□ -0.55
FAM49A-201ENST00000381323 ABCC5O15440 1437 aa11.62□□□□□ -0.55
FAM49A-201ENST00000381323 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
FAM49A-201ENST00000381323 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
FAM49A-201ENST00000381323 NLRP1Q9C000 1473 aa11.61□□□□□ -0.55
FAM49A-201ENST00000381323 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
FAM49A-201ENST00000381323 IDI1Q13907 227 aa11.6□□□□□ -0.55
FAM49A-201ENST00000381323 PZPP20742 1482 aa11.6□□□□□ -0.55
FAM49A-201ENST00000381323 UGGT1Q9NYU2 1555 aa11.6□□□□□ -0.55
FAM49A-201ENST00000381323 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
FAM49A-201ENST00000381323 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
FAM49A-201ENST00000381323 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
FAM49A-201ENST00000381323 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
FAM49A-201ENST00000381323 ATF3P18847 181 aa11.58□□□□□ -0.56
FAM49A-201ENST00000381323 C3P01024 1663 aa11.58□□□□□ -0.56
FAM49A-201ENST00000381323 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
FAM49A-201ENST00000381323 CEP170BQ9Y4F5 1589 aaPredicted RBP11.58□□□□□ -0.56
FAM49A-201ENST00000381323 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
FAM49A-201ENST00000381323 PLA2R1Q13018 1463 aa11.56□□□□□ -0.56
FAM49A-201ENST00000381323 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
FAM49A-201ENST00000381323 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
FAM49A-201ENST00000381323 HSPA1LP34931 641 aa11.53□□□□□ -0.56
FAM49A-201ENST00000381323 LTKP29376 864 aa11.53□□□□□ -0.56
FAM49A-201ENST00000381323 MSH6P52701 1360 aa11.53□□□□□ -0.56
FAM49A-201ENST00000381323 ERVK-7P63135 1459 aa11.53□□□□□ -0.56
FAM49A-201ENST00000381323 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
FAM49A-201ENST00000381323 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.57
FAM49A-201ENST00000381323 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.57
FAM49A-201ENST00000381323 PLXNC1O60486 1568 aa11.52□□□□□ -0.57
FAM49A-201ENST00000381323 ABCC3O15438 1527 aa11.51□□□□□ -0.57
FAM49A-201ENST00000381323 RGL3Q3MIN7 710 aa11.51□□□□□ -0.57
FAM49A-201ENST00000381323 TMEM2Q9UHN6 1383 aa11.51□□□□□ -0.57
FAM49A-201ENST00000381323 KCNA6P17658 529 aa11.51□□□□□ -0.57
FAM49A-201ENST00000381323 MROH2AA6NES4 1674 aa11.5□□□□□ -0.57
FAM49A-201ENST00000381323 MYO3AQ8NEV4 1616 aa11.48□□□□□ -0.57
FAM49A-201ENST00000381323 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
FAM49A-201ENST00000381323 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
FAM49A-201ENST00000381323 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
FAM49A-201ENST00000381323 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
FAM49A-201ENST00000381323 MAST1Q9Y2H9 1570 aa11.47□□□□□ -0.57
FAM49A-201ENST00000381323 CPS1P31327 1500 aa11.46□□□□□ -0.57
FAM49A-201ENST00000381323 TMEM94Q12767 1356 aa11.46□□□□□ -0.58
FAM49A-201ENST00000381323 RIMS2Q9UQ26 1411 aa11.46□□□□□ -0.58
FAM49A-201ENST00000381323 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.58
FAM49A-201ENST00000381323 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
FAM49A-201ENST00000381323 ROCK1Q13464 1354 aa11.45□□□□□ -0.58
FAM49A-201ENST00000381323 DNMT1P26358 1616 aaKnown RBP11.45□□□□□ -0.58
FAM49A-201ENST00000381323 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
FAM49A-201ENST00000381323 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
FAM49A-201ENST00000381323 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
FAM49A-201ENST00000381323 EFCAB6Q5THR3 1501 aa11.45□□□□□ -0.58
FAM49A-201ENST00000381323 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
FAM49A-201ENST00000381323 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
FAM49A-201ENST00000381323 STK26Q9P289 416 aa11.44□□□□□ -0.58
FAM49A-201ENST00000381323 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
FAM49A-201ENST00000381323 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
FAM49A-201ENST00000381323 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
FAM49A-201ENST00000381323 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
FAM49A-201ENST00000381323 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
FAM49A-201ENST00000381323 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
FAM49A-201ENST00000381323 ZC3H13Q5T200 1668 aaKnown RBP11.41□□□□□ -0.58
FAM49A-201ENST00000381323 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
FAM49A-201ENST00000381323 FOXD1Q16676 465 aa11.4□□□□□ -0.58
FAM49A-201ENST00000381323 POGKQ9P215 609 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms