RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 LCA5Q86VQ0 697 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 UIMC1Q96RL1 719 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 ZC4H2Q9NQZ6 224 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 SCAF1Q9H7N4 1312 aaKnown RBP5.88□□□□□ -1.47
PTCD2-202ENST00000380639 ARID4AP29374 1257 aaPredicted RBP5.88□□□□□ -1.47
PTCD2-202ENST00000380639 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 ZFYVE1Q9HBF4 777 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 PLEKHG5O94827 1062 aa5.88□□□□□ -1.47
PTCD2-202ENST00000380639 GOLIM4O00461 696 aa5.87□□□□□ -1.47
PTCD2-202ENST00000380639 HIRIP3Q9BW71 556 aaPredicted RBP5.87□□□□□ -1.47
PTCD2-202ENST00000380639 DDX23Q9BUQ8 820 aaKnown RBP5.87□□□□□ -1.47
PTCD2-202ENST00000380639 GZF1Q9H116 711 aaPredicted RBP5.87□□□□□ -1.47
PTCD2-202ENST00000380639 DAAM2Q86T65 1068 aa5.87□□□□□ -1.47
PTCD2-202ENST00000380639 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.475e-17■■■■■ 409.9
PTCD2-202ENST00000380639 NPM1P06748 294 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTCD2-202ENST00000380639 NOL8Q76FK4 1167 aaKnown RBP5.87□□□□□ -1.47
PTCD2-202ENST00000380639 CAGE1Q8TC20 777 aa5.87□□□□□ -1.47
PTCD2-202ENST00000380639 FAM193AP78312 1265 aa5.87□□□□□ -1.47
PTCD2-202ENST00000380639 CCP110O43303 1012 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 LETM1O95202 739 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-202ENST00000380639 NUCB2P80303 420 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 HSP90B2PQ58FF3 399 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 JAKMIP3Q5VZ66 844 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 BBXQ8WY36 941 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-202ENST00000380639 KIF3CO14782 793 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 HNRNPUL2Q1KMD3 747 aaKnown RBP5.86□□□□□ -1.47
PTCD2-202ENST00000380639 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
PTCD2-202ENST00000380639 DDX12PQ92771 950 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 DBN1Q16643 649 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 CPSF2Q9P2I0 782 aaKnown RBP5.85□□□□□ -1.47
PTCD2-202ENST00000380639 CCDC91Q7Z6B0 441 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 MBD3O95983 291 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 HSCBQ8IWL3 235 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 ZWINTO95229 277 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 TPM2P07951 284 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 FOSBP53539 338 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 MFAP1P55081 439 aaKnown RBP5.85□□□□□ -1.47
PTCD2-202ENST00000380639 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 TSR1Q2NL82 804 aaKnown RBP5.85□□□□□ -1.47
PTCD2-202ENST00000380639 FAM114A2Q9NRY5 505 aa5.85□□□□□ -1.47
PTCD2-202ENST00000380639 AKAP17AQ02040 695 aaKnown RBP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 EIF3JO75822 258 aaKnown RBP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 IBSPP21815 317 aaPredicted RBP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 SARNPP82979 210 aaKnown RBP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 MPHOSPH6Q99547 160 aaKnown RBP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 TRIM35Q9UPQ4 493 aa5.84□□□□□ -1.47
PTCD2-202ENST00000380639 ZRANB2O95218 330 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTCD2-202ENST00000380639 TDO2P48775 406 aa5.84□□□□□ -1.47
PTCD2-202ENST00000380639 SKIDA1Q1XH10 827 aa5.84□□□□□ -1.48
PTCD2-202ENST00000380639 SEPT7Q16181 437 aaKnown RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 KIF3BO15066 747 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 ZNHIT6Q9NWK9 470 aaKnown RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 KIF3AQ9Y496 699 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 CCDC173Q0VFZ6 552 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 MTERF4Q7Z6M4 381 aaKnown RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 CSRNP3Q8WYN3 585 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 ZBTB12Q9Y330 459 aaPredicted RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 GTF2A1P52655 376 aaPredicted RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 FBXW7Q969H0 707 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 SPRYD3Q8NCJ5 442 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 PPFIBP2Q8ND30 876 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 HDAC5Q9UQL6 1122 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 ITPRIPQ8IWB1 547 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 SATB2Q9UPW6 733 aa5.83□□□□□ -1.48
PTCD2-202ENST00000380639 IPO9Q96P70 1041 aaKnown RBP5.83□□□□□ -1.48
PTCD2-202ENST00000380639 CFAP45Q9UL16 551 aa5.82□□□□□ -1.48
PTCD2-202ENST00000380639 BMS1Q14692 1282 aaKnown RBP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 MICALCLQ6ZW33 695 aa5.82□□□□□ -1.48
PTCD2-202ENST00000380639 WHAMMQ8TF30 809 aa5.82□□□□□ -1.48
PTCD2-202ENST00000380639 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 HNRNPUQ00839 825 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 TTLL5Q6EMB2 1281 aa5.82□□□□□ -1.48
PTCD2-202ENST00000380639 PPM1EQ8WY54 764 aa5.82□□□□□ -1.48
PTCD2-202ENST00000380639 FEZ2Q9UHY8 353 aaPredicted RBP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 CGNQ9P2M7 1197 aaKnown RBP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 EZRP15311 586 aaKnown RBP5.82□□□□□ -1.48
PTCD2-202ENST00000380639 TPM1P09493 284 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 CT47A1Q5JQC4 288 aaPredicted RBP5.81□□□□□ -1.48
PTCD2-202ENST00000380639 SALL2Q9Y467 1007 aaPredicted RBP5.81□□□□□ -1.48
PTCD2-202ENST00000380639 KCNJ4P48050 445 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 TRIM6-TRIM34B2RNG4 842 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 PLCD3Q8N3E9 789 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 KIF16BQ96L93 1317 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 CAVIN1Q6NZI2 390 aaKnown RBP5.81□□□□□ -1.48
PTCD2-202ENST00000380639 CCDC174Q6PII3 467 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 CCDC144CPQ8IYA2 1237 aa5.81□□□□□ -1.48
PTCD2-202ENST00000380639 NAP1L3Q99457 506 aaPredicted RBP5.81□□□□□ -1.48
PTCD2-202ENST00000380639 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
PTCD2-202ENST00000380639 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 FAM160A1Q05DH4 1040 aa5.8□□□□□ -1.48
PTCD2-202ENST00000380639 LMOD3Q0VAK6 560 aa5.8□□□□□ -1.48
PTCD2-202ENST00000380639 SMC1AQ14683 1233 aaKnown RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 ALS2CR12Q96Q35 445 aa5.8□□□□□ -1.48
PTCD2-202ENST00000380639 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 C10orf67Q8IYJ2 551 aa5.8□□□□□ -1.48
PTCD2-202ENST00000380639 PUS7Q96PZ0 661 aaKnown RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 PRPF40AO75400 957 aaKnown RBP5.8□□□□□ -1.48
PTCD2-202ENST00000380639 GMNNO75496 209 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms