RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
NHLRC3-201ENST00000379599 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 SEC24BO95487 1268 aa10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 SASS6Q6UVJ0 657 aa10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 PNISRQ8TF01 805 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 ZBTB9Q96C00 473 aa10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 UPF2Q9HAU5 1272 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-201ENST00000379599 APPP05067 770 aa10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 C20orf194Q5TEA3 1177 aa10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 TSC1Q92574 1164 aa10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 CHMP5Q9NZZ3 219 aa10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 BAZ1AQ9NRL2 1556 aaPredicted RBP10.72□□□□□ -0.69
NHLRC3-201ENST00000379599 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 USP19O94966 1318 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 ATP2B3Q16720 1220 aa10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 JARID2Q92833 1246 aaPredicted RBP10.71□□□□□ -0.69
NHLRC3-201ENST00000379599 CNPY4Q8N129 248 aa10.71□□□□□ -0.7
NHLRC3-201ENST00000379599 CHMP4CQ96CF2 233 aa10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 UNC13AQ9UPW8 1703 aa10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 EIF4G1Q04637 1599 aaKnown RBP10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
NHLRC3-201ENST00000379599 PANK3Q9H999 370 aa10.69□□□□□ -0.7
NHLRC3-201ENST00000379599 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
NHLRC3-201ENST00000379599 HDAC5Q9UQL6 1122 aa10.69□□□□□ -0.7
NHLRC3-201ENST00000379599 KIF7Q2M1P5 1343 aa10.68□□□□□ -0.7
NHLRC3-201ENST00000379599 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
NHLRC3-201ENST00000379599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.68□□□□□ -0.7
NHLRC3-201ENST00000379599 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
NHLRC3-201ENST00000379599 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
NHLRC3-201ENST00000379599 ZNF500O60304 480 aaPredicted RBP10.67□□□□□ -0.7
NHLRC3-201ENST00000379599 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
NHLRC3-201ENST00000379599 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 VGFO15240 615 aaPredicted RBP10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 TRIM34Q9BYJ4 488 aa10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
NHLRC3-201ENST00000379599 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.7
NHLRC3-201ENST00000379599 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
NHLRC3-201ENST00000379599 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
NHLRC3-201ENST00000379599 NCOA1Q15788 1441 aa10.65□□□□□ -0.7
NHLRC3-201ENST00000379599 SMARCA4P51532 1647 aa10.65□□□□□ -0.7
NHLRC3-201ENST00000379599 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
NHLRC3-201ENST00000379599 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
NHLRC3-201ENST00000379599 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
NHLRC3-201ENST00000379599 PATL2C9JE40 543 aaKnown RBP10.63□□□□□ -0.71
NHLRC3-201ENST00000379599 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
NHLRC3-201ENST00000379599 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
NHLRC3-201ENST00000379599 SKOR2Q2VWA4 1001 aaPredicted RBP10.63□□□□□ -0.71
NHLRC3-201ENST00000379599 ZKSCAN5Q9Y2L8 839 aa10.63□□□□□ -0.71
NHLRC3-201ENST00000379599 PDCL2Q8N4E4 241 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 GBP4Q96PP9 640 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 MYRIPQ8NFW9 859 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 SLC52A1Q9NWF4 448 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 CLGNO14967 610 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
NHLRC3-201ENST00000379599 CCDC66A2RUB6 948 aa10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 TNNT3P45378 269 aaPredicted RBP10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 HS1BP3Q53T59 392 aa10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 PTMAP06454 111 aaKnown RBP10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 U2AF2P26368 475 aaKnown RBP eCLIP10.61□□□□□ -0.714e-7■■■■□ 24.7
NHLRC3-201ENST00000379599 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
NHLRC3-201ENST00000379599 TBC1D32Q96NH3 1257 aa10.6□□□□□ -0.71
NHLRC3-201ENST00000379599 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 FAM193AP78312 1265 aa10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 SLC20A2Q08357 652 aa10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
NHLRC3-201ENST00000379599 L3MBTL2Q969R5 705 aa10.58□□□□□ -0.72
NHLRC3-201ENST00000379599 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 HMGN5P82970 282 aaKnown RBP10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 SOX12O15370 315 aa10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 MCM5P33992 734 aa10.57□□□□□ -0.72
NHLRC3-201ENST00000379599 GOLGA6L22H0YM25 854 aa10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 PTMSP20962 102 aa10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 KIAA2012Q0VF49 1180 aa10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 DHX29Q7Z478 1369 aaKnown RBP10.56□□□□□ -0.72
NHLRC3-201ENST00000379599 LOC102724159A0A0B4J2E5 919 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 PWP2Q15269 919 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 TOP2AP11388 1531 aaKnown RBP10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 CAPN2P17655 700 aa10.55□□□□□ -0.72
NHLRC3-201ENST00000379599 MLECQ14165 292 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms