RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ADAM33Q9BZ11 813 aa10.75□□□□□ -0.69
RNU4-4P-201ENST00000364588 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
RNU4-4P-201ENST00000364588 AXIN2Q9Y2T1 843 aa10.74□□□□□ -0.69
RNU4-4P-201ENST00000364588 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
RNU4-4P-201ENST00000364588 GRXCR2A6NFK2 248 aa10.72□□□□□ -0.69
RNU4-4P-201ENST00000364588 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
RNU4-4P-201ENST00000364588 PSEN2P49810 448 aa10.71□□□□□ -0.69
RNU4-4P-201ENST00000364588 TK2O00142 265 aa10.7□□□□□ -0.7
RNU4-4P-201ENST00000364588 MAP3K7O43318 606 aa10.7□□□□□ -0.7
RNU4-4P-201ENST00000364588 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
RNU4-4P-201ENST00000364588 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
RNU4-4P-201ENST00000364588 C6orf132Q5T0Z8 1188 aa10.67□□□□□ -0.7
RNU4-4P-201ENST00000364588 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
RNU4-4P-201ENST00000364588 ADGRD1Q6QNK2 874 aa10.67□□□□□ -0.7
RNU4-4P-201ENST00000364588 SLC4A5Q9BY07 1137 aa10.67□□□□□ -0.7
RNU4-4P-201ENST00000364588 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
RNU4-4P-201ENST00000364588 SEMA3EO15041 775 aa10.66□□□□□ -0.7
RNU4-4P-201ENST00000364588 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
RNU4-4P-201ENST00000364588 SPNS2Q8IVW8 549 aa10.66□□□□□ -0.7
RNU4-4P-201ENST00000364588 OSBPP22059 807 aa10.65□□□□□ -0.7
RNU4-4P-201ENST00000364588 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
RNU4-4P-201ENST00000364588 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
RNU4-4P-201ENST00000364588 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
RNU4-4P-201ENST00000364588 ZBED2Q9BTP6 218 aa10.64□□□□□ -0.71
RNU4-4P-201ENST00000364588 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
RNU4-4P-201ENST00000364588 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
RNU4-4P-201ENST00000364588 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
RNU4-4P-201ENST00000364588 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
RNU4-4P-201ENST00000364588 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
RNU4-4P-201ENST00000364588 COL9A1P20849 921 aa10.61□□□□□ -0.71
RNU4-4P-201ENST00000364588 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
RNU4-4P-201ENST00000364588 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
RNU4-4P-201ENST00000364588 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
RNU4-4P-201ENST00000364588 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
RNU4-4P-201ENST00000364588 STAC3Q96MF2 364 aa10.59□□□□□ -0.71
RNU4-4P-201ENST00000364588 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
RNU4-4P-201ENST00000364588 HRO43593 1189 aa10.58□□□□□ -0.72
RNU4-4P-201ENST00000364588 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
RNU4-4P-201ENST00000364588 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
RNU4-4P-201ENST00000364588 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
RNU4-4P-201ENST00000364588 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
RNU4-4P-201ENST00000364588 RABGEF1Q9UJ41 708 aa10.57□□□□□ -0.72
RNU4-4P-201ENST00000364588 TRIM6-TRIM34B2RNG4 842 aa10.55□□□□□ -0.72
RNU4-4P-201ENST00000364588 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
RNU4-4P-201ENST00000364588 RNF166Q96A37 237 aaPredicted RBP10.55□□□□□ -0.72
RNU4-4P-201ENST00000364588 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
RNU4-4P-201ENST00000364588 PRSS12P56730 875 aa10.53□□□□□ -0.72
RNU4-4P-201ENST00000364588 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
RNU4-4P-201ENST00000364588 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
RNU4-4P-201ENST00000364588 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
RNU4-4P-201ENST00000364588 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
RNU4-4P-201ENST00000364588 BHMG1C9JSJ3 638 aaPredicted RBP10.51□□□□□ -0.73
RNU4-4P-201ENST00000364588 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
RNU4-4P-201ENST00000364588 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
RNU4-4P-201ENST00000364588 LAPTM4BQ86VI4 370 aa10.5□□□□□ -0.73
RNU4-4P-201ENST00000364588 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
RNU4-4P-201ENST00000364588 FCHSD2O94868 740 aa10.49□□□□□ -0.73
RNU4-4P-201ENST00000364588 PTGDRQ13258 359 aa10.49□□□□□ -0.73
RNU4-4P-201ENST00000364588 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
RNU4-4P-201ENST00000364588 EIF4G1Q04637 1599 aaKnown RBP10.48□□□□□ -0.73
RNU4-4P-201ENST00000364588 GOLGA8CPA6NN73 597 aa10.48□□□□□ -0.73
RNU4-4P-201ENST00000364588 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
RNU4-4P-201ENST00000364588 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
RNU4-4P-201ENST00000364588 TSKSQ9UJT2 592 aa10.48□□□□□ -0.73
RNU4-4P-201ENST00000364588 PADI6Q6TGC4 694 aa10.46□□□□□ -0.73
RNU4-4P-201ENST00000364588 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
RNU4-4P-201ENST00000364588 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
RNU4-4P-201ENST00000364588 HIC1Q14526 733 aa10.44□□□□□ -0.74
RNU4-4P-201ENST00000364588 TTC13Q8NBP0 860 aa10.44□□□□□ -0.74
RNU4-4P-201ENST00000364588 ANKK1Q8NFD2 765 aa10.43□□□□□ -0.74
RNU4-4P-201ENST00000364588 SEPT9Q9UHD8 586 aaPredicted RBP10.43□□□□□ -0.74
RNU4-4P-201ENST00000364588 WNT2BQ93097 391 aa10.42□□□□□ -0.74
RNU4-4P-201ENST00000364588 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
RNU4-4P-201ENST00000364588 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
RNU4-4P-201ENST00000364588 PNMA3Q9UL41 463 aa10.41□□□□□ -0.74
RNU4-4P-201ENST00000364588 TATDN2Q93075 761 aa10.4□□□□□ -0.74
RNU4-4P-201ENST00000364588 ZFRQ96KR1 1074 aaKnown RBP10.4□□□□□ -0.74
RNU4-4P-201ENST00000364588 GNPATO15228 680 aa10.39□□□□□ -0.75
RNU4-4P-201ENST00000364588 GPR37O15354 613 aa10.39□□□□□ -0.75
RNU4-4P-201ENST00000364588 HCSTQ9UBK5 93 aa10.39□□□□□ -0.75
RNU4-4P-201ENST00000364588 THSD4Q6ZMP0 1018 aa10.38□□□□□ -0.75
RNU4-4P-201ENST00000364588 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
RNU4-4P-201ENST00000364588 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
RNU4-4P-201ENST00000364588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
RNU4-4P-201ENST00000364588 RBM46Q8TBY0 533 aaKnown RBP10.36□□□□□ -0.75
RNU4-4P-201ENST00000364588 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
RNU4-4P-201ENST00000364588 SMAPO00193 183 aa10.35□□□□□ -0.75
RNU4-4P-201ENST00000364588 BCANQ96GW7 911 aa10.35□□□□□ -0.75
RNU4-4P-201ENST00000364588 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
RNU4-4P-201ENST00000364588 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
RNU4-4P-201ENST00000364588 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
RNU4-4P-201ENST00000364588 HDGFP51858 240 aaKnown RBP10.33□□□□□ -0.76
RNU4-4P-201ENST00000364588 C3orf80F5H4A9 247 aa10.32□□□□□ -0.76
RNU4-4P-201ENST00000364588 OATP04181 439 aa10.32□□□□□ -0.76
RNU4-4P-201ENST00000364588 SLC4A3P48751 1232 aa10.32□□□□□ -0.76
RNU4-4P-201ENST00000364588 DNAJB2P25686 324 aa10.31□□□□□ -0.76
RNU4-4P-201ENST00000364588 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
RNU4-4P-201ENST00000364588 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
RNU4-4P-201ENST00000364588 EYA1Q99502 592 aa10.31□□□□□ -0.76
RNU4-4P-201ENST00000364588 BCAMP50895 628 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms