RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 RINLQ6ZS11 566 aa6.98□□□□□ -1.29
RNU6-249P-201ENST00000363016 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
RNU6-249P-201ENST00000363016 NME8Q8N427 588 aa6.98□□□□□ -1.29
RNU6-249P-201ENST00000363016 KRI1Q8N9T8 703 aaKnown RBP6.98□□□□□ -1.29
RNU6-249P-201ENST00000363016 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 UBXN4Q92575 508 aa6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 METTL14Q9HCE5 456 aaKnown RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 PPP1R1BQ9UD71 204 aaPredicted RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 CIZ1Q9ULV3 898 aaPredicted RBP6.97□□□□□ -1.29
RNU6-249P-201ENST00000363016 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 MYBPC2Q14324 1141 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 SMYD5Q6GMV2 418 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 KRBA2Q6ZNG9 492 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 C8orf37Q96NL8 207 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 MTA3Q9BTC8 594 aa6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 SPINK5Q9NQ38 1064 aaPredicted RBP6.96□□□□□ -1.3
RNU6-249P-201ENST00000363016 ONECUT3O60422 494 aaPredicted RBP6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 SND1Q7KZF4 910 aaKnown RBP eCLIP6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 NBPF11Q86T75 865 aa6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 SIRT1Q96EB6 747 aa6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 SLC52A1Q9NWF4 448 aa6.95□□□□□ -1.3
RNU6-249P-201ENST00000363016 SH3BP5O60239 455 aa6.94□□□□□ -1.3
RNU6-249P-201ENST00000363016 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
RNU6-249P-201ENST00000363016 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
RNU6-249P-201ENST00000363016 TESPA1A2RU30 521 aaPredicted RBP6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 NBPF1Q3BBV0 1214 aa6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 CEP120Q8N960 986 aa6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 TRIM41Q8WV44 630 aa6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 ARHGEF1Q92888 912 aaKnown RBP6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 MRRFQ96E11 262 aaKnown RBP6.93□□□□□ -1.3
RNU6-249P-201ENST00000363016 CCER2I3L3R5 266 aa6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 PEX14O75381 377 aa6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 FOSBP53539 338 aa6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 PDE4DQ08499 809 aa6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 ZFYVE27Q5T4F4 411 aa6.92□□□□□ -1.3
RNU6-249P-201ENST00000363016 CREB3O43889 395 aa6.91□□□□□ -1.3
RNU6-249P-201ENST00000363016 ZRANB2O95218 330 aaKnown RBP eCLIP6.91□□□□□ -1.3
RNU6-249P-201ENST00000363016 DDRGK1Q96HY6 314 aa6.91□□□□□ -1.3
RNU6-249P-201ENST00000363016 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
RNU6-249P-201ENST00000363016 FOXD4Q12950 439 aaPredicted RBP6.9□□□□□ -1.3
RNU6-249P-201ENST00000363016 SDR16C5Q8N3Y7 309 aa6.9□□□□□ -1.3
RNU6-249P-201ENST00000363016 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
RNU6-249P-201ENST00000363016 ATF5Q9Y2D1 282 aaPredicted RBP6.9□□□□□ -1.3
RNU6-249P-201ENST00000363016 GOLIM4O00461 696 aa6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 SEMA3EO15041 775 aa6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 IVNS1ABPQ9Y6Y0 642 aa6.89□□□□□ -1.31
RNU6-249P-201ENST00000363016 EXOC5O00471 708 aa6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 MAP4K4O95819 1239 aaPredicted RBP6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 FOXD1Q16676 465 aa6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 CCDC85AQ96PX6 553 aaPredicted RBP6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 PLSCR2Q9NRY7 297 aa6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
RNU6-249P-201ENST00000363016 TRIM66O15016 1216 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 PPFIA4O75335 1185 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 MMP14P50281 582 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 ZC3H6P61129 1189 aaKnown RBP6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 IGBP1P78318 339 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 HSP90AB2PQ58FF8 381 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 GIMAP6Q6P9H5 292 aa6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 FNBP4Q8N3X1 1017 aaPredicted RBP6.87□□□□□ -1.31
RNU6-249P-201ENST00000363016 HSP90AA1P07900 732 aaKnown RBP6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 HDAC1Q13547 482 aaPredicted RBP6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 MCM6Q14566 821 aa6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 PNMA2Q9UL42 364 aa6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
RNU6-249P-201ENST00000363016 APPP05067 770 aa6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 POLA2Q14181 598 aa6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
RNU6-249P-201ENST00000363016 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 CCAR1Q8IX12 1150 aaKnown RBP6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 PLCD3Q8N3E9 789 aa6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 PNISRQ8TF01 805 aaKnown RBP6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 FRMD4BQ9Y2L6 1034 aa6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 TMA7Q9Y2S6 64 aaKnown RBP6.84□□□□□ -1.31
RNU6-249P-201ENST00000363016 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 KIF4AO95239 1232 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 CLEC4GQ6UXB4 293 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 TSPAN18Q96SJ8 248 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 MAF1Q9H063 256 aa6.83□□□□□ -1.32
RNU6-249P-201ENST00000363016 RPS6KL1Q9Y6S9 549 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms