RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
SMC4-202ENST00000357388 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
SMC4-202ENST00000357388 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
SMC4-202ENST00000357388 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.135e-12■■■■■ 47.2
SMC4-202ENST00000357388 BECN2A8MW95 431 aa15.83■□□□□ 0.13
SMC4-202ENST00000357388 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
SMC4-202ENST00000357388 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
SMC4-202ENST00000357388 RRP12Q5JTH9 1297 aaKnown RBP15.83■□□□□ 0.12
SMC4-202ENST00000357388 CWC15Q9P013 229 aaKnown RBP15.83■□□□□ 0.12
SMC4-202ENST00000357388 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
SMC4-202ENST00000357388 EIF4G1Q04637 1599 aaKnown RBP15.82■□□□□ 0.12
SMC4-202ENST00000357388 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
SMC4-202ENST00000357388 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
SMC4-202ENST00000357388 CCDC66A2RUB6 948 aa15.82■□□□□ 0.12
SMC4-202ENST00000357388 CHMP3Q9Y3E7 222 aa15.82■□□□□ 0.12
SMC4-202ENST00000357388 APBB1O00213 710 aa15.82■□□□□ 0.12
SMC4-202ENST00000357388 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
SMC4-202ENST00000357388 SETD5Q9C0A6 1442 aa15.81■□□□□ 0.12
SMC4-202ENST00000357388 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
SMC4-202ENST00000357388 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
SMC4-202ENST00000357388 TPD52L1Q16890 204 aaPredicted RBP15.8■□□□□ 0.12
SMC4-202ENST00000357388 CCAR2Q8N163 923 aaKnown RBP15.8■□□□□ 0.12
SMC4-202ENST00000357388 FAM13BQ9NYF5 915 aa15.8■□□□□ 0.12
SMC4-202ENST00000357388 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
SMC4-202ENST00000357388 AK7Q96M32 723 aa15.8■□□□□ 0.12
SMC4-202ENST00000357388 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
SMC4-202ENST00000357388 PDE4AP27815 886 aa15.79■□□□□ 0.12
SMC4-202ENST00000357388 CENPJQ9HC77 1338 aaPredicted RBP15.79■□□□□ 0.12
SMC4-202ENST00000357388 DIAPH3Q9NSV4 1193 aa15.79■□□□□ 0.12
SMC4-202ENST00000357388 CARMIL1Q5VZK9 1371 aa15.78■□□□□ 0.12
SMC4-202ENST00000357388 IPO7O95373 1038 aaKnown RBP15.78■□□□□ 0.12
SMC4-202ENST00000357388 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
SMC4-202ENST00000357388 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
SMC4-202ENST00000357388 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
SMC4-202ENST00000357388 PKD2Q13563 968 aa15.77■□□□□ 0.11
SMC4-202ENST00000357388 MARCH6O60337 910 aa15.76■□□□□ 0.11
SMC4-202ENST00000357388 APPP05067 770 aa15.76■□□□□ 0.11
SMC4-202ENST00000357388 H3BQV1 296 aa15.76■□□□□ 0.11
SMC4-202ENST00000357388 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
SMC4-202ENST00000357388 CHMP5Q9NZZ3 219 aa15.75■□□□□ 0.11
SMC4-202ENST00000357388 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
SMC4-202ENST00000357388 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 HSP90B2PQ58FF3 399 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 RUFY1Q96T51 708 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 ZNF592Q92610 1267 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 AMPHP49418 695 aa15.74■□□□□ 0.11
SMC4-202ENST00000357388 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
SMC4-202ENST00000357388 PKNOX2Q96KN3 472 aa15.73■□□□□ 0.11
SMC4-202ENST00000357388 NACADO15069 1562 aa15.73■□□□□ 0.11
SMC4-202ENST00000357388 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
SMC4-202ENST00000357388 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
SMC4-202ENST00000357388 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
SMC4-202ENST00000357388 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
SMC4-202ENST00000357388 FAM184AQ8NB25 1140 aa15.72■□□□□ 0.11
SMC4-202ENST00000357388 CCDC39Q9UFE4 941 aa15.72■□□□□ 0.11
SMC4-202ENST00000357388 HOOK1Q9UJC3 728 aaKnown RBP15.71■□□□□ 0.11
SMC4-202ENST00000357388 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.11
SMC4-202ENST00000357388 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 TOMM22Q9NS69 142 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 CUX2O14529 1486 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 VPS53Q5VIR6 699 aa15.71■□□□□ 0.11
SMC4-202ENST00000357388 MRE11P49959 708 aa15.7■□□□□ 0.1
SMC4-202ENST00000357388 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
SMC4-202ENST00000357388 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
SMC4-202ENST00000357388 PES1O00541 588 aaKnown RBP15.7■□□□□ 0.1
SMC4-202ENST00000357388 RSPH4AQ5TD94 716 aa15.69■□□□□ 0.1
SMC4-202ENST00000357388 NUCB2P80303 420 aa15.69■□□□□ 0.1
SMC4-202ENST00000357388 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
SMC4-202ENST00000357388 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
SMC4-202ENST00000357388 NUP155O75694 1391 aa15.68■□□□□ 0.1
SMC4-202ENST00000357388 KIF3BO15066 747 aa15.67■□□□□ 0.1
SMC4-202ENST00000357388 REC8O95072 547 aa15.67■□□□□ 0.1
SMC4-202ENST00000357388 PDE4CQ08493 712 aa15.67■□□□□ 0.1
SMC4-202ENST00000357388 LRRFIP1Q32MZ4 808 aaKnown RBP15.67■□□□□ 0.1
SMC4-202ENST00000357388 AMOTL1Q8IY63 956 aa15.66■□□□□ 0.1
SMC4-202ENST00000357388 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
SMC4-202ENST00000357388 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
SMC4-202ENST00000357388 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
SMC4-202ENST00000357388 NOL10Q9BSC4 688 aaKnown RBP15.66■□□□□ 0.1
SMC4-202ENST00000357388 SLC4A10Q6U841 1118 aa15.66■□□□□ 0.1
SMC4-202ENST00000357388 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
SMC4-202ENST00000357388 CTDP1Q9Y5B0 961 aaPredicted RBP15.65■□□□□ 0.1
SMC4-202ENST00000357388 KIF15Q9NS87 1388 aa15.65■□□□□ 0.1
SMC4-202ENST00000357388 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
SMC4-202ENST00000357388 RUFY2Q8WXA3 655 aa15.64■□□□□ 0.1
SMC4-202ENST00000357388 H0YHG0 523 aa15.64■□□□□ 0.09
SMC4-202ENST00000357388 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SMC4-202ENST00000357388 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SMC4-202ENST00000357388 AKAP17AQ02040 695 aaKnown RBP15.64■□□□□ 0.09
SMC4-202ENST00000357388 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
SMC4-202ENST00000357388 CCP110O43303 1012 aa15.63■□□□□ 0.09
SMC4-202ENST00000357388 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
SMC4-202ENST00000357388 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
SMC4-202ENST00000357388 SASS6Q6UVJ0 657 aa15.63■□□□□ 0.09
SMC4-202ENST00000357388 EVA1CP58658 441 aa15.62■□□□□ 0.09
SMC4-202ENST00000357388 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
SMC4-202ENST00000357388 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms