RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
SKP1-202ENST00000353411 TOP2AP11388 1531 aaKnown RBP6.24□□□□□ -1.41
SKP1-202ENST00000353411 VPS8Q8N3P4 1428 aa6.24□□□□□ -1.41
SKP1-202ENST00000353411 AXDND1Q5T1B0 1012 aaPredicted RBP6.24□□□□□ -1.41
SKP1-202ENST00000353411 SMARCA4P51532 1647 aa6.23□□□□□ -1.41
SKP1-202ENST00000353411 KIF20AO95235 890 aa6.23□□□□□ -1.41
SKP1-202ENST00000353411 SIN3AQ96ST3 1273 aa6.23□□□□□ -1.41
SKP1-202ENST00000353411 DHX57Q6P158 1386 aaKnown RBP6.23□□□□□ -1.41
SKP1-202ENST00000353411 RSF1Q96T23 1441 aaPredicted RBP6.23□□□□□ -1.41
SKP1-202ENST00000353411 USP8P40818 1118 aa6.23□□□□□ -1.41
SKP1-202ENST00000353411 ZHX1Q9UKY1 873 aaPredicted RBP6.23□□□□□ -1.41
SKP1-202ENST00000353411 RBM25P49756 843 aaKnown RBP6.22□□□□□ -1.41
SKP1-202ENST00000353411 PPP1R15AO75807 674 aaPredicted RBP6.22□□□□□ -1.41
SKP1-202ENST00000353411 KDM2AQ9Y2K7 1162 aa6.22□□□□□ -1.41
SKP1-202ENST00000353411 CADPSQ9ULU8 1353 aa6.21□□□□□ -1.41
SKP1-202ENST00000353411 SASS6Q6UVJ0 657 aa6.21□□□□□ -1.41
SKP1-202ENST00000353411 CGNQ9P2M7 1197 aaKnown RBP6.21□□□□□ -1.41
SKP1-202ENST00000353411 ROCK2O75116 1388 aaKnown RBP6.21□□□□□ -1.42
SKP1-202ENST00000353411 CUX2O14529 1486 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 RDXP35241 583 aaKnown RBP6.21□□□□□ -1.42
SKP1-202ENST00000353411 CDCA8Q53HL2 280 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 TIGD1Q96MW7 591 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 MCM5P33992 734 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 PSMD1Q99460 953 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 CARMIL2Q6F5E8 1435 aa6.21□□□□□ -1.42
SKP1-202ENST00000353411 AK7Q96M32 723 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 MFAP1P55081 439 aaKnown RBP6.2□□□□□ -1.42
SKP1-202ENST00000353411 TPM4P67936 248 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 MRC2Q9UBG0 1479 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 CLGNO14967 610 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 HSPA5P11021 654 aaKnown RBP6.2□□□□□ -1.42
SKP1-202ENST00000353411 BCL11BQ9C0K0 894 aaPredicted RBP6.2□□□□□ -1.42
SKP1-202ENST00000353411 KNSTRNQ9Y448 316 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 ST18O60284 1047 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 CTR9Q6PD62 1173 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 EXOC6Q8TAG9 804 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 CAVIN1Q6NZI2 390 aaKnown RBP6.2□□□□□ -1.42
SKP1-202ENST00000353411 LEKR1Q6ZMV7 388 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 AEBP1Q8IUX7 1158 aa6.2□□□□□ -1.42
SKP1-202ENST00000353411 NUCB2P80303 420 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 RAB3GAP2Q9H2M9 1393 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 AAMPQ13685 434 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 EIF3AQ14152 1382 aaKnown RBP6.19□□□□□ -1.42
SKP1-202ENST00000353411 KIF27Q86VH2 1401 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 NBPF1Q3BBV0 1214 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 IPO4Q8TEX9 1081 aaKnown RBP6.19□□□□□ -1.42
SKP1-202ENST00000353411 PRDM10Q9NQV6 1147 aa6.19□□□□□ -1.42
SKP1-202ENST00000353411 PRKRIP1Q9H875 184 aaPredicted RBP6.18□□□□□ -1.42
SKP1-202ENST00000353411 ATP6V1DQ9Y5K8 247 aa6.18□□□□□ -1.42
SKP1-202ENST00000353411 CC2D2AQ9P2K1 1620 aa6.18□□□□□ -1.42
SKP1-202ENST00000353411 TERF1P54274 439 aa6.18□□□□□ -1.42
SKP1-202ENST00000353411 CCDC94Q9BW85 323 aaPredicted RBP6.18□□□□□ -1.42
SKP1-202ENST00000353411 ATAD2BQ9ULI0 1458 aa6.18□□□□□ -1.42
SKP1-202ENST00000353411 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
SKP1-202ENST00000353411 LAMC3Q9Y6N6 1575 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 SMG6Q86US8 1419 aaKnown RBP6.17□□□□□ -1.42
SKP1-202ENST00000353411 PRIMPOLQ96LW4 560 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 MTUS2Q5JR59 1369 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 CENPJQ9HC77 1338 aaPredicted RBP6.17□□□□□ -1.42
SKP1-202ENST00000353411 CBX1P83916 185 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 HSP90B2PQ58FF3 399 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 CFAP53Q96M91 514 aa6.17□□□□□ -1.42
SKP1-202ENST00000353411 IFT140Q96RY7 1462 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 MCM4P33991 863 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 MBD3O95983 291 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 SSR1P43307 286 aaKnown RBP6.16□□□□□ -1.42
SKP1-202ENST00000353411 KCNJ4P48050 445 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 RNF20Q5VTR2 975 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 CARD11Q9BXL7 1154 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 RAD21O60216 631 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
SKP1-202ENST00000353411 GTF2A1P52655 376 aaPredicted RBP6.15□□□□□ -1.42
SKP1-202ENST00000353411 CIZ1Q9ULV3 898 aaPredicted RBP6.15□□□□□ -1.42
SKP1-202ENST00000353411 KIF15Q9NS87 1388 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 SENP3-EIF4A1A0A087X0R7 540 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 PPP4R3BQ5MIZ7 849 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 NOC3LQ8WTT2 800 aaKnown RBP6.15□□□□□ -1.42
SKP1-202ENST00000353411 ZNF592Q92610 1267 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 CRBNQ96SW2 442 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 GOLGA2Q08379 1002 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 POGKQ9P215 609 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 IPO8O15397 1037 aaKnown RBP6.15□□□□□ -1.42
SKP1-202ENST00000353411 IFT57Q9NWB7 429 aa6.15□□□□□ -1.42
SKP1-202ENST00000353411 GOLGA6L19H0YKK7 550 aa6.15□□□□□ -1.43
SKP1-202ENST00000353411 HS1BP3Q53T59 392 aa6.15□□□□□ -1.43
SKP1-202ENST00000353411 H0YHG0 523 aa6.14□□□□□ -1.43
SKP1-202ENST00000353411 MNS1Q8NEH6 495 aa6.14□□□□□ -1.43
SKP1-202ENST00000353411 MAPK8IP2Q13387 824 aaPredicted RBP6.14□□□□□ -1.43
SKP1-202ENST00000353411 MYBBP1AQ9BQG0 1328 aaKnown RBP6.14□□□□□ -1.43
SKP1-202ENST00000353411 OSCARQ8IYS5 282 aa6.14□□□□□ -1.43
SKP1-202ENST00000353411 FAM107BQ9H098 131 aa6.14□□□□□ -1.43
SKP1-202ENST00000353411 DHX8Q14562 1220 aaKnown RBP6.14□□□□□ -1.43
SKP1-202ENST00000353411 C22orf23Q9BZE7 217 aa6.14□□□□□ -1.43
SKP1-202ENST00000353411 GIMAP7Q8NHV1 300 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 CCDC70Q6NSX1 233 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 CCDC112Q8NEF3 446 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 ERCC4Q92889 916 aaPredicted RBP6.13□□□□□ -1.43
SKP1-202ENST00000353411 E9PSI1 815 aa6.13□□□□□ -1.43
SKP1-202ENST00000353411 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms