RNA–Protein interactions for RNA: ENST00000346618.7

E2F3-201, Transcript of E2F transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene E2F3, Length 4,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-201ENST00000346618 GOLGA6L19H0YKK7 550 aa18.4■□□□□ 0.54
E2F3-201ENST00000346618 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
E2F3-201ENST00000346618 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
E2F3-201ENST00000346618 PLIN1O60240 522 aa18.4■□□□□ 0.54
E2F3-201ENST00000346618 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
E2F3-201ENST00000346618 POGKQ9P215 609 aa18.4■□□□□ 0.54
E2F3-201ENST00000346618 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
E2F3-201ENST00000346618 LEKR1Q6ZMV7 388 aa18.39■□□□□ 0.53
E2F3-201ENST00000346618 AK7Q96M32 723 aa18.39■□□□□ 0.53
E2F3-201ENST00000346618 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
E2F3-201ENST00000346618 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
E2F3-201ENST00000346618 CBX1P83916 185 aa18.38■□□□□ 0.53
E2F3-201ENST00000346618 HSP90B2PQ58FF3 399 aa18.38■□□□□ 0.53
E2F3-201ENST00000346618 GTPBP4Q9BZE4 634 aaKnown RBP18.38■□□□□ 0.53
E2F3-201ENST00000346618 SMAP1Q8IYB5 467 aaPredicted RBP18.37■□□□□ 0.53
E2F3-201ENST00000346618 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
E2F3-201ENST00000346618 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
E2F3-201ENST00000346618 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
E2F3-201ENST00000346618 TMF1P82094 1093 aa18.37■□□□□ 0.53
E2F3-201ENST00000346618 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
E2F3-201ENST00000346618 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
E2F3-201ENST00000346618 MNS1Q8NEH6 495 aa18.36■□□□□ 0.53
E2F3-201ENST00000346618 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
E2F3-201ENST00000346618 MBD3O95983 291 aa18.35■□□□□ 0.53
E2F3-201ENST00000346618 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
E2F3-201ENST00000346618 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
E2F3-201ENST00000346618 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
E2F3-201ENST00000346618 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
E2F3-201ENST00000346618 BECN2A8MW95 431 aa18.33■□□□□ 0.53
E2F3-201ENST00000346618 H0YHG0 523 aa18.33■□□□□ 0.52
E2F3-201ENST00000346618 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
E2F3-201ENST00000346618 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
E2F3-201ENST00000346618 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
E2F3-201ENST00000346618 AAMPQ13685 434 aa18.31■□□□□ 0.52
E2F3-201ENST00000346618 FOXD4L5Q5VV16 416 aaPredicted RBP18.31■□□□□ 0.52
E2F3-201ENST00000346618 FOXD4L4Q8WXT5 416 aaPredicted RBP18.31■□□□□ 0.52
E2F3-201ENST00000346618 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
E2F3-201ENST00000346618 MCM5P33992 734 aa18.29■□□□□ 0.52
E2F3-201ENST00000346618 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
E2F3-201ENST00000346618 CCDC112Q8NEF3 446 aa18.29■□□□□ 0.52
E2F3-201ENST00000346618 RNF214Q8ND24 703 aa18.29■□□□□ 0.52
E2F3-201ENST00000346618 ERICH4A6NGS2 130 aa18.28■□□□□ 0.52
E2F3-201ENST00000346618 KIF20AO95235 890 aa18.28■□□□□ 0.52
E2F3-201ENST00000346618 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
E2F3-201ENST00000346618 CCDC70Q6NSX1 233 aa18.28■□□□□ 0.52
E2F3-201ENST00000346618 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
E2F3-201ENST00000346618 TSPY26PQ9H489 355 aa18.27■□□□□ 0.52
E2F3-201ENST00000346618 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.52
E2F3-201ENST00000346618 NBPF1Q3BBV0 1214 aa18.27■□□□□ 0.51
E2F3-201ENST00000346618 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
E2F3-201ENST00000346618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.515e-7■■□□□ 12.5
E2F3-201ENST00000346618 CHGAP10645 457 aaKnown RBP18.24■□□□□ 0.51
E2F3-201ENST00000346618 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
E2F3-201ENST00000346618 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
E2F3-201ENST00000346618 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
E2F3-201ENST00000346618 E9PSI1 815 aa18.22■□□□□ 0.51
E2F3-201ENST00000346618 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
E2F3-201ENST00000346618 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
E2F3-201ENST00000346618 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
E2F3-201ENST00000346618 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
E2F3-201ENST00000346618 RNF20Q5VTR2 975 aa18.21■□□□□ 0.51
E2F3-201ENST00000346618 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.51
E2F3-201ENST00000346618 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
E2F3-201ENST00000346618 PRIMPOLQ96LW4 560 aa18.21■□□□□ 0.51
E2F3-201ENST00000346618 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
E2F3-201ENST00000346618 CCDC94Q9BW85 323 aaPredicted RBP18.21■□□□□ 0.51
E2F3-201ENST00000346618 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
E2F3-201ENST00000346618 PAXIP1Q6ZW49 1069 aaPredicted RBP18.2■□□□□ 0.5
E2F3-201ENST00000346618 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
E2F3-201ENST00000346618 GTF2A1P52655 376 aaPredicted RBP18.2■□□□□ 0.5
E2F3-201ENST00000346618 GIMAP7Q8NHV1 300 aa18.2■□□□□ 0.5
E2F3-201ENST00000346618 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
E2F3-201ENST00000346618 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
E2F3-201ENST00000346618 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
E2F3-201ENST00000346618 REC8O95072 547 aa18.18■□□□□ 0.5
E2F3-201ENST00000346618 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
E2F3-201ENST00000346618 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
E2F3-201ENST00000346618 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
E2F3-201ENST00000346618 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
E2F3-201ENST00000346618 GPATCH11Q8N954 259 aa18.18■□□□□ 0.5
E2F3-201ENST00000346618 L3MBTL2Q969R5 705 aa18.17■□□□□ 0.5
E2F3-201ENST00000346618 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
E2F3-201ENST00000346618 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
E2F3-201ENST00000346618 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
E2F3-201ENST00000346618 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
E2F3-201ENST00000346618 CCP110O43303 1012 aa18.15■□□□□ 0.5
E2F3-201ENST00000346618 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
E2F3-201ENST00000346618 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
E2F3-201ENST00000346618 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
E2F3-201ENST00000346618 APBB1O00213 710 aa18.14■□□□□ 0.5
E2F3-201ENST00000346618 HMMRO75330 724 aa18.14■□□□□ 0.5
E2F3-201ENST00000346618 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.5
E2F3-201ENST00000346618 OFD1O75665 1012 aa18.14■□□□□ 0.5
E2F3-201ENST00000346618 CDR1P51861 262 aa18.14■□□□□ 0.49
E2F3-201ENST00000346618 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
E2F3-201ENST00000346618 RUFY1Q96T51 708 aa18.13■□□□□ 0.49
E2F3-201ENST00000346618 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
E2F3-201ENST00000346618 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
E2F3-201ENST00000346618 DHX8Q14562 1220 aaKnown RBP18.13■□□□□ 0.49
E2F3-201ENST00000346618 EIF3JO75822 258 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms