RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 MCCP23508 829 aa25.42■■□□□ 1.66
SOX12-201ENST00000342665 L1TD1Q5T7N2 865 aaKnown RBP25.42■■□□□ 1.66
SOX12-201ENST00000342665 EXOC6Q8TAG9 804 aa25.41■■□□□ 1.66
SOX12-201ENST00000342665 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
SOX12-201ENST00000342665 E9PSI1 815 aa25.4■■□□□ 1.66
SOX12-201ENST00000342665 EFCAB5A4FU69 1503 aa25.39■■□□□ 1.66
SOX12-201ENST00000342665 GRIN2BQ13224 1484 aa25.39■■□□□ 1.66
SOX12-201ENST00000342665 CENPQQ7L2Z9 268 aaPredicted RBP25.39■■□□□ 1.66
SOX12-201ENST00000342665 TPRNQ4KMQ1 711 aa25.39■■□□□ 1.66
SOX12-201ENST00000342665 SLKQ9H2G2 1235 aaPredicted RBP25.39■■□□□ 1.65
SOX12-201ENST00000342665 NGEFQ8N5V2 710 aa25.38■■□□□ 1.65
SOX12-201ENST00000342665 APBB1O00213 710 aa25.38■■□□□ 1.65
SOX12-201ENST00000342665 PLIN1O60240 522 aa25.38■■□□□ 1.65
SOX12-201ENST00000342665 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
SOX12-201ENST00000342665 FGD1P98174 961 aa25.37■■□□□ 1.65
SOX12-201ENST00000342665 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
SOX12-201ENST00000342665 LMOD3Q0VAK6 560 aa25.36■■□□□ 1.65
SOX12-201ENST00000342665 RRP7AQ9Y3A4 280 aaKnown RBP25.36■■□□□ 1.65
SOX12-201ENST00000342665 APAF1O14727 1248 aa25.35■■□□□ 1.65
SOX12-201ENST00000342665 PDE4AP27815 886 aa25.35■■□□□ 1.65
SOX12-201ENST00000342665 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
SOX12-201ENST00000342665 CHMP4AQ9BY43 222 aa25.35■■□□□ 1.65
SOX12-201ENST00000342665 DNTTIP2Q5QJE6 756 aaKnown RBP25.33■■□□□ 1.65
SOX12-201ENST00000342665 HFM1A2PYH4 1435 aa25.32■■□□□ 1.64
SOX12-201ENST00000342665 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
SOX12-201ENST00000342665 STK31Q9BXU1 1019 aa25.32■■□□□ 1.64
SOX12-201ENST00000342665 GBP4Q96PP9 640 aa25.31■■□□□ 1.64
SOX12-201ENST00000342665 PAK3O75914 559 aaPredicted RBP25.31■■□□□ 1.64
SOX12-201ENST00000342665 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
SOX12-201ENST00000342665 MFAP1P55081 439 aaKnown RBP25.3■■□□□ 1.64
SOX12-201ENST00000342665 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
SOX12-201ENST00000342665 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.3■■□□□ 1.64
SOX12-201ENST00000342665 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
SOX12-201ENST00000342665 FANCIQ9NVI1 1328 aa25.29■■□□□ 1.64
SOX12-201ENST00000342665 NAP1L5Q96NT1 182 aaPredicted RBP25.29■■□□□ 1.64
SOX12-201ENST00000342665 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
SOX12-201ENST00000342665 PLCB2Q00722 1185 aa25.29■■□□□ 1.64
SOX12-201ENST00000342665 FAM161AQ3B820 660 aa25.28■■□□□ 1.64
SOX12-201ENST00000342665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
SOX12-201ENST00000342665 HMMRO75330 724 aa25.27■■□□□ 1.64
SOX12-201ENST00000342665 NESP48681 1621 aa25.27■■□□□ 1.64
SOX12-201ENST00000342665 EID1Q9Y6B2 187 aa25.26■■□□□ 1.63
SOX12-201ENST00000342665 KIAA1211Q6ZU35 1233 aa25.25■■□□□ 1.63
SOX12-201ENST00000342665 BCL2L13Q9BXK5 485 aa25.25■■□□□ 1.63
SOX12-201ENST00000342665 GOLGA6L4A6NEF3 574 aa25.25■■□□□ 1.63
SOX12-201ENST00000342665 PTMSP20962 102 aa25.25■■□□□ 1.63
SOX12-201ENST00000342665 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
SOX12-201ENST00000342665 ZKSCAN2Q63HK3 967 aa25.24■■□□□ 1.63
SOX12-201ENST00000342665 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
SOX12-201ENST00000342665 EHBP1L1Q8N3D4 1523 aa25.24■■□□□ 1.63
SOX12-201ENST00000342665 NGDNQ8NEJ9 315 aaKnown RBP25.24■■□□□ 1.63
SOX12-201ENST00000342665 COG6Q9Y2V7 657 aa25.22■■□□□ 1.63
SOX12-201ENST00000342665 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
SOX12-201ENST00000342665 NBPF8Q3BBV2 869 aa25.21■■□□□ 1.63
SOX12-201ENST00000342665 AMPHP49418 695 aa25.18■■□□□ 1.62
SOX12-201ENST00000342665 NAP1L2Q9ULW6 460 aaPredicted RBP25.18■■□□□ 1.62
SOX12-201ENST00000342665 MINK1Q8N4C8 1332 aaPredicted RBP25.18■■□□□ 1.62
SOX12-201ENST00000342665 HDAC5Q9UQL6 1122 aa25.18■■□□□ 1.62
SOX12-201ENST00000342665 GZF1Q9H116 711 aaPredicted RBP25.17■■□□□ 1.62
SOX12-201ENST00000342665 SLC4A10Q6U841 1118 aa25.17■■□□□ 1.62
SOX12-201ENST00000342665 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
SOX12-201ENST00000342665 TROQ12816 1431 aaPredicted RBP25.16■■□□□ 1.62
SOX12-201ENST00000342665 COG3Q96JB2 828 aa25.15■■□□□ 1.62
SOX12-201ENST00000342665 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
SOX12-201ENST00000342665 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
SOX12-201ENST00000342665 NUTM2FA1L443 756 aa25.14■■□□□ 1.62
SOX12-201ENST00000342665 ELL2O00472 640 aaPredicted RBP25.14■■□□□ 1.61
SOX12-201ENST00000342665 AFAP1Q8N556 730 aa25.13■■□□□ 1.61
SOX12-201ENST00000342665 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
SOX12-201ENST00000342665 MSNP26038 577 aaKnown RBP25.12■■□□□ 1.61
SOX12-201ENST00000342665 DIAPH1O60610 1272 aaKnown RBP25.12■■□□□ 1.61
SOX12-201ENST00000342665 NAIPQ13075 1403 aa25.11■■□□□ 1.61
SOX12-201ENST00000342665 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SOX12-201ENST00000342665 PRG4Q92954 1404 aaPredicted RBP25.1■■□□□ 1.61
SOX12-201ENST00000342665 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
SOX12-201ENST00000342665 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
SOX12-201ENST00000342665 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
SOX12-201ENST00000342665 C9orf84Q5VXU9 1444 aa25.09■■□□□ 1.61
SOX12-201ENST00000342665 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
SOX12-201ENST00000342665 DDX19BQ9UMR2 479 aa25.09■■□□□ 1.61
SOX12-201ENST00000342665 NBPF1Q3BBV0 1214 aa25.08■■□□□ 1.61
SOX12-201ENST00000342665 TRIM6-TRIM34B2RNG4 842 aa25.08■■□□□ 1.61
SOX12-201ENST00000342665 CDK11BP21127 795 aaKnown RBP25.08■■□□□ 1.61
SOX12-201ENST00000342665 NRDCO43847 1150 aa25.08■■□□□ 1.6
SOX12-201ENST00000342665 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
SOX12-201ENST00000342665 TAOK2Q9UL54 1235 aa25.07■■□□□ 1.6
SOX12-201ENST00000342665 GOLGA6L6A8MZA4 724 aa25.07■■□□□ 1.6
SOX12-201ENST00000342665 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
SOX12-201ENST00000342665 WDR97A6NE52 1622 aa25.06■■□□□ 1.6
SOX12-201ENST00000342665 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
SOX12-201ENST00000342665 GOLGA6L3A6NEY3 463 aa25.06■■□□□ 1.6
SOX12-201ENST00000342665 BICRAQ9NZM4 1560 aa25.06■■□□□ 1.6
SOX12-201ENST00000342665 ANKRD45Q5TZF3 282 aa25.06■■□□□ 1.6
SOX12-201ENST00000342665 ARHGAP5Q13017 1502 aa25.06■■□□□ 1.6
SOX12-201ENST00000342665 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
SOX12-201ENST00000342665 SLC4A3P48751 1232 aa25.05■■□□□ 1.6
SOX12-201ENST00000342665 RIPK4P57078 832 aa25.05■■□□□ 1.6
SOX12-201ENST00000342665 CFAP70Q5T0N1 1121 aa25.05■■□□□ 1.6
SOX12-201ENST00000342665 DAPK1P53355 1430 aa25.04■■□□□ 1.6
SOX12-201ENST00000342665 LTV1Q96GA3 475 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms