RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 FAM184AQ8NB25 1140 aa14.61□□□□□ -0.07
SHANK2-201ENST00000338508 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 RCAN3Q9UKA8 241 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 PTMSP20962 102 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 ZNF592Q92610 1267 aa14.6□□□□□ -0.07
SHANK2-201ENST00000338508 SETQ01105 290 aaPredicted RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
SHANK2-201ENST00000338508 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
SHANK2-201ENST00000338508 ELL2O00472 640 aaPredicted RBP14.58□□□□□ -0.07
SHANK2-201ENST00000338508 NECTIN2Q92692 538 aa14.58□□□□□ -0.07
SHANK2-201ENST00000338508 HMMRO75330 724 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 TPM2P07951 284 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 FOSBP53539 338 aa14.58□□□□□ -0.08
SHANK2-201ENST00000338508 RBM19Q9Y4C8 960 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 APPP05067 770 aa14.57□□□□□ -0.08
SHANK2-201ENST00000338508 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 HSPA5P11021 654 aaKnown RBP14.57□□□□□ -0.08
SHANK2-201ENST00000338508 NOL10Q9BSC4 688 aaKnown RBP14.56□□□□□ -0.08
SHANK2-201ENST00000338508 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 PMFBP1Q8TBY8 1022 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
SHANK2-201ENST00000338508 VPS37DQ86XT2 251 aa14.55□□□□□ -0.08
SHANK2-201ENST00000338508 PKD2Q13563 968 aa14.54□□□□□ -0.08
SHANK2-201ENST00000338508 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
SHANK2-201ENST00000338508 SYNE3Q6ZMZ3 975 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 KDM4AO75164 1064 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 CCDC43Q96MW1 224 aaKnown RBP14.53□□□□□ -0.08
SHANK2-201ENST00000338508 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 ST18O60284 1047 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 PHF14O94880 888 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 EIF2S2P20042 333 aaKnown RBP14.53□□□□□ -0.08
SHANK2-201ENST00000338508 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 USP35Q9P2H5 1018 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 BECN2A8MW95 431 aa14.53□□□□□ -0.08
SHANK2-201ENST00000338508 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.08
SHANK2-201ENST00000338508 FYB1O15117 783 aa14.52□□□□□ -0.08
SHANK2-201ENST00000338508 TPM1P09493 284 aa14.52□□□□□ -0.09
SHANK2-201ENST00000338508 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
SHANK2-201ENST00000338508 NAP1L1P55209 391 aaKnown RBP14.51□□□□□ -0.09
SHANK2-201ENST00000338508 C1orf141Q5JVX7 400 aa14.51□□□□□ -0.09
SHANK2-201ENST00000338508 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
SHANK2-201ENST00000338508 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
SHANK2-201ENST00000338508 ZFYVE27Q5T4F4 411 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 ANKRD45Q5TZF3 282 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 CCDC70Q6NSX1 233 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
SHANK2-201ENST00000338508 MYO15BQ96JP2 1530 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 SLC4A3P48751 1232 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 TRIM29Q14134 588 aa14.49□□□□□ -0.09
SHANK2-201ENST00000338508 ODF2Q5BJF6 829 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
SHANK2-201ENST00000338508 CT47A1Q5JQC4 288 aaPredicted RBP14.48□□□□□ -0.09
SHANK2-201ENST00000338508 PAF1Q8N7H5 531 aa14.48□□□□□ -0.09
SHANK2-201ENST00000338508 SKIDA1Q1XH10 827 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 NFXL1Q6ZNB6 911 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
SHANK2-201ENST00000338508 ZNF771Q7L3S4 317 aaPredicted RBP14.47□□□□□ -0.09
SHANK2-201ENST00000338508 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
SHANK2-201ENST00000338508 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.09
SHANK2-201ENST00000338508 KIF27Q86VH2 1401 aa14.46□□□□□ -0.1
SHANK2-201ENST00000338508 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
SHANK2-201ENST00000338508 CALRP27797 417 aaKnown RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 CENPJQ9HC77 1338 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 C9orf78Q9NZ63 289 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-201ENST00000338508 KIF3BO15066 747 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 ANO2Q9NQ90 1003 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 TTC5Q8N0Z6 440 aa14.44□□□□□ -0.1
SHANK2-201ENST00000338508 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
SHANK2-201ENST00000338508 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
SHANK2-201ENST00000338508 DIAPH3Q9NSV4 1193 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC27Q2M243 656 aa14.43□□□□□ -0.1
SHANK2-201ENST00000338508 R3HCC1Q9Y3T6 440 aaKnown RBP14.42□□□□□ -0.1
SHANK2-201ENST00000338508 IKQ13123 557 aaPredicted RBP14.42□□□□□ -0.1
SHANK2-201ENST00000338508 CPLX1O14810 134 aa14.42□□□□□ -0.1
SHANK2-201ENST00000338508 PLIN1O60240 522 aa14.42□□□□□ -0.1
SHANK2-201ENST00000338508 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 TEFQ10587 303 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 GPS2Q13227 327 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
SHANK2-201ENST00000338508 HSP90AA2PQ14568 343 aaPredicted RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
SHANK2-201ENST00000338508 LMOD3Q0VAK6 560 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 EPS15P42566 896 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 BICD2Q8TD16 824 aa14.4□□□□□ -0.1
SHANK2-201ENST00000338508 ERICH2A1L162 156 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 NEXNQ0ZGT2 675 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 ANKRD20A12PQ8NF67 263 aa14.39□□□□□ -0.11
SHANK2-201ENST00000338508 FAM177BA6PVY3 158 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms