RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SPAG9O60271 1321 aaKnown RBP20.25■□□□□ 0.83
PTCH1-201ENST00000331920 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
PTCH1-201ENST00000331920 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
PTCH1-201ENST00000331920 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
PTCH1-201ENST00000331920 ST18O60284 1047 aa20.25■□□□□ 0.83
PTCH1-201ENST00000331920 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
PTCH1-201ENST00000331920 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
PTCH1-201ENST00000331920 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
PTCH1-201ENST00000331920 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
PTCH1-201ENST00000331920 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
PTCH1-201ENST00000331920 DHX37Q8IY37 1157 aaKnown RBP20.22■□□□□ 0.83
PTCH1-201ENST00000331920 SIN3AQ96ST3 1273 aa20.22■□□□□ 0.83
PTCH1-201ENST00000331920 KIF3AQ9Y496 699 aa20.22■□□□□ 0.83
PTCH1-201ENST00000331920 AK7Q96M32 723 aa20.22■□□□□ 0.83
PTCH1-201ENST00000331920 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
PTCH1-201ENST00000331920 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
PTCH1-201ENST00000331920 CCDC43Q96MW1 224 aaKnown RBP20.21■□□□□ 0.83
PTCH1-201ENST00000331920 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
PTCH1-201ENST00000331920 HMMRO75330 724 aa20.19■□□□□ 0.82
PTCH1-201ENST00000331920 PAF1Q8N7H5 531 aa20.19■□□□□ 0.82
PTCH1-201ENST00000331920 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
PTCH1-201ENST00000331920 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
PTCH1-201ENST00000331920 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
PTCH1-201ENST00000331920 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-201ENST00000331920 FOSBP53539 338 aa20.17■□□□□ 0.82
PTCH1-201ENST00000331920 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
PTCH1-201ENST00000331920 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
PTCH1-201ENST00000331920 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
PTCH1-201ENST00000331920 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
PTCH1-201ENST00000331920 SYNE3Q6ZMZ3 975 aa20.16■□□□□ 0.82
PTCH1-201ENST00000331920 CCDC191Q8NCU4 936 aa20.16■□□□□ 0.82
PTCH1-201ENST00000331920 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
PTCH1-201ENST00000331920 ANKRD20A12PQ8NF67 263 aa20.15■□□□□ 0.82
PTCH1-201ENST00000331920 TRIM29Q14134 588 aa20.14■□□□□ 0.82
PTCH1-201ENST00000331920 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
PTCH1-201ENST00000331920 NOL10Q9BSC4 688 aaKnown RBP20.14■□□□□ 0.81
PTCH1-201ENST00000331920 EPS15P42566 896 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 KLHL34Q8N239 644 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 H0YHG0 523 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
PTCH1-201ENST00000331920 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
PTCH1-201ENST00000331920 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
PTCH1-201ENST00000331920 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
PTCH1-201ENST00000331920 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
PTCH1-201ENST00000331920 KANK1Q14678 1352 aa20.11■□□□□ 0.81
PTCH1-201ENST00000331920 CDR1P51861 262 aa20.11■□□□□ 0.81
PTCH1-201ENST00000331920 CCDC47Q96A33 483 aaKnown RBP20.11■□□□□ 0.81
PTCH1-201ENST00000331920 RDXP35241 583 aaKnown RBP20.1■□□□□ 0.81
PTCH1-201ENST00000331920 HSP90AB3PQ58FF7 597 aa20.1■□□□□ 0.81
PTCH1-201ENST00000331920 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
PTCH1-201ENST00000331920 CLIP1P30622 1438 aa20.09■□□□□ 0.81
PTCH1-201ENST00000331920 R3HCC1Q9Y3T6 440 aaKnown RBP20.08■□□□□ 0.81
PTCH1-201ENST00000331920 CAGE1Q8TC20 777 aa20.08■□□□□ 0.8
PTCH1-201ENST00000331920 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PTCH1-201ENST00000331920 SLC4A3P48751 1232 aa20.07■□□□□ 0.8
PTCH1-201ENST00000331920 IPO9Q96P70 1041 aaKnown RBP20.07■□□□□ 0.8
PTCH1-201ENST00000331920 ANKRD62A6NC57 917 aa20.06■□□□□ 0.8
PTCH1-201ENST00000331920 NEFHP12036 1026 aa20.05■□□□□ 0.8
PTCH1-201ENST00000331920 HOOK1Q9UJC3 728 aaKnown RBP20.05■□□□□ 0.8
PTCH1-201ENST00000331920 BICD2Q8TD16 824 aa20.05■□□□□ 0.8
PTCH1-201ENST00000331920 TMEM132AQ24JP5 1023 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 NUTM2FA1L443 756 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 DCTN1Q14203 1278 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 KDM4AO75164 1064 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 HSP90B2PQ58FF3 399 aa20.04■□□□□ 0.8
PTCH1-201ENST00000331920 HDAC5Q9UQL6 1122 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 IFT57Q9NWB7 429 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 PDILTQ8N807 584 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
PTCH1-201ENST00000331920 MNS1Q8NEH6 495 aa20.02■□□□□ 0.8
PTCH1-201ENST00000331920 MTMR7Q9Y216 660 aa20.02■□□□□ 0.8
PTCH1-201ENST00000331920 AMPHP49418 695 aa20.02■□□□□ 0.8
PTCH1-201ENST00000331920 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.79
PTCH1-201ENST00000331920 GGT6Q6P531 493 aa20.01■□□□□ 0.79
PTCH1-201ENST00000331920 CCDC173Q0VFZ6 552 aa20■□□□□ 0.79
PTCH1-201ENST00000331920 CPLX1O14810 134 aa20■□□□□ 0.79
PTCH1-201ENST00000331920 FYB1O15117 783 aa20■□□□□ 0.79
PTCH1-201ENST00000331920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
PTCH1-201ENST00000331920 ACBD3Q9H3P7 528 aa20■□□□□ 0.79
PTCH1-201ENST00000331920 OFD1O75665 1012 aa19.99■□□□□ 0.79
PTCH1-201ENST00000331920 CCDC97Q96F63 343 aaPredicted RBP19.99■□□□□ 0.79
PTCH1-201ENST00000331920 EVA1CP58658 441 aa19.98■□□□□ 0.79
PTCH1-201ENST00000331920 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
PTCH1-201ENST00000331920 ARGLU1Q9NWB6 273 aaPredicted RBP19.97■□□□□ 0.79
PTCH1-201ENST00000331920 CPLX2Q6PUV4 134 aaKnown RBP19.97■□□□□ 0.79
PTCH1-201ENST00000331920 TSPYL1Q9H0U9 437 aa19.97■□□□□ 0.79
PTCH1-201ENST00000331920 SASS6Q6UVJ0 657 aa19.97■□□□□ 0.79
PTCH1-201ENST00000331920 ZRSR2Q15696 482 aaKnown RBP19.96■□□□□ 0.79
PTCH1-201ENST00000331920 NGDNQ8NEJ9 315 aaKnown RBP19.96■□□□□ 0.79
PTCH1-201ENST00000331920 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
PTCH1-201ENST00000331920 ERICH2A1L162 156 aa19.96■□□□□ 0.79
PTCH1-201ENST00000331920 NUTM2DQ5VT03 806 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-201ENST00000331920 SYTL4Q96C24 671 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-201ENST00000331920 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
PTCH1-201ENST00000331920 NECTIN2Q92692 538 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms