RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 HMMRO75330 724 aa17.48■□□□□ 0.39
PCM1-201ENST00000325083 NUTM2DQ5VT03 806 aaPredicted RBP17.48■□□□□ 0.39
PCM1-201ENST00000325083 GOLGA6L19H0YKK7 550 aa17.48■□□□□ 0.39
PCM1-201ENST00000325083 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
PCM1-201ENST00000325083 ST18O60284 1047 aa17.47■□□□□ 0.39
PCM1-201ENST00000325083 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
PCM1-201ENST00000325083 CALRP27797 417 aaKnown RBP17.47■□□□□ 0.39
PCM1-201ENST00000325083 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
PCM1-201ENST00000325083 AKAP17AQ02040 695 aaKnown RBP17.46■□□□□ 0.39
PCM1-201ENST00000325083 CCDC70Q6NSX1 233 aa17.45■□□□□ 0.38
PCM1-201ENST00000325083 MSH5O43196 834 aa17.45■□□□□ 0.38
PCM1-201ENST00000325083 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
PCM1-201ENST00000325083 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
PCM1-201ENST00000325083 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
PCM1-201ENST00000325083 FBXW7Q969H0 707 aa17.44■□□□□ 0.38
PCM1-201ENST00000325083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■■■□□ 16.9
PCM1-201ENST00000325083 TPM1P09493 284 aa17.43■□□□□ 0.38
PCM1-201ENST00000325083 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
PCM1-201ENST00000325083 IPO9Q96P70 1041 aaKnown RBP17.42■□□□□ 0.38
PCM1-201ENST00000325083 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
PCM1-201ENST00000325083 AMPHP49418 695 aa17.42■□□□□ 0.38
PCM1-201ENST00000325083 BECN2A8MW95 431 aa17.41■□□□□ 0.38
PCM1-201ENST00000325083 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
PCM1-201ENST00000325083 KIF3AQ9Y496 699 aa17.4■□□□□ 0.38
PCM1-201ENST00000325083 GPS2Q13227 327 aa17.39■□□□□ 0.38
PCM1-201ENST00000325083 RRP12Q5JTH9 1297 aaKnown RBP17.39■□□□□ 0.38
PCM1-201ENST00000325083 PKD2Q13563 968 aa17.39■□□□□ 0.37
PCM1-201ENST00000325083 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
PCM1-201ENST00000325083 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
PCM1-201ENST00000325083 FOSBP53539 338 aa17.39■□□□□ 0.37
PCM1-201ENST00000325083 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
PCM1-201ENST00000325083 SAMD1Q6SPF0 538 aaPredicted RBP17.38■□□□□ 0.37
PCM1-201ENST00000325083 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
PCM1-201ENST00000325083 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
PCM1-201ENST00000325083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■■■■ 42.1
PCM1-201ENST00000325083 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
PCM1-201ENST00000325083 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
PCM1-201ENST00000325083 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
PCM1-201ENST00000325083 DDX49Q9Y6V7 483 aaKnown RBP17.36■□□□□ 0.37
PCM1-201ENST00000325083 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
PCM1-201ENST00000325083 DHX16O60231 1041 aaKnown RBP17.35■□□□□ 0.37
PCM1-201ENST00000325083 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
PCM1-201ENST00000325083 NAP1L1P55209 391 aaKnown RBP17.35■□□□□ 0.37
PCM1-201ENST00000325083 RALBP1Q15311 655 aa17.35■□□□□ 0.37
PCM1-201ENST00000325083 TRIM29Q14134 588 aa17.35■□□□□ 0.37
PCM1-201ENST00000325083 CWC22Q9HCG8 908 aaKnown RBP17.34■□□□□ 0.37
PCM1-201ENST00000325083 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
PCM1-201ENST00000325083 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
PCM1-201ENST00000325083 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
PCM1-201ENST00000325083 APPP05067 770 aa17.33■□□□□ 0.36
PCM1-201ENST00000325083 EVA1CP58658 441 aa17.33■□□□□ 0.36
PCM1-201ENST00000325083 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.36
PCM1-201ENST00000325083 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
PCM1-201ENST00000325083 ELL2O00472 640 aaPredicted RBP17.32■□□□□ 0.36
PCM1-201ENST00000325083 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
PCM1-201ENST00000325083 EIF3AQ14152 1382 aaKnown RBP17.32■□□□□ 0.36
PCM1-201ENST00000325083 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
PCM1-201ENST00000325083 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
PCM1-201ENST00000325083 EEA1Q15075 1411 aa17.3■□□□□ 0.36
PCM1-201ENST00000325083 TEX35Q5T0J7 233 aa17.3■□□□□ 0.36
PCM1-201ENST00000325083 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
PCM1-201ENST00000325083 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
PCM1-201ENST00000325083 CCDC47Q96A33 483 aaKnown RBP17.29■□□□□ 0.36
PCM1-201ENST00000325083 RUFY1Q96T51 708 aa17.28■□□□□ 0.36
PCM1-201ENST00000325083 KDM4AO75164 1064 aa17.28■□□□□ 0.36
PCM1-201ENST00000325083 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
PCM1-201ENST00000325083 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
PCM1-201ENST00000325083 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
PCM1-201ENST00000325083 KLHL34Q8N239 644 aa17.27■□□□□ 0.36
PCM1-201ENST00000325083 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
PCM1-201ENST00000325083 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
PCM1-201ENST00000325083 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
PCM1-201ENST00000325083 ODF2Q5BJF6 829 aa17.27■□□□□ 0.36
PCM1-201ENST00000325083 PLIN1O60240 522 aa17.27■□□□□ 0.35
PCM1-201ENST00000325083 ANKRD20A12PQ8NF67 263 aa17.27■□□□□ 0.35
PCM1-201ENST00000325083 CT47A1Q5JQC4 288 aaPredicted RBP17.26■□□□□ 0.35
PCM1-201ENST00000325083 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
PCM1-201ENST00000325083 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
PCM1-201ENST00000325083 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
PCM1-201ENST00000325083 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
PCM1-201ENST00000325083 BICD2Q8TD16 824 aa17.26■□□□□ 0.35
PCM1-201ENST00000325083 AK7Q96M32 723 aa17.25■□□□□ 0.35
PCM1-201ENST00000325083 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
PCM1-201ENST00000325083 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
PCM1-201ENST00000325083 FAM13BQ9NYF5 915 aa17.25■□□□□ 0.35
PCM1-201ENST00000325083 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
PCM1-201ENST00000325083 FYB1O15117 783 aa17.24■□□□□ 0.35
PCM1-201ENST00000325083 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
PCM1-201ENST00000325083 SYTL4Q96C24 671 aaPredicted RBP17.24■□□□□ 0.35
PCM1-201ENST00000325083 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
PCM1-201ENST00000325083 MAP7D2Q96T17 732 aa17.23■□□□□ 0.35
PCM1-201ENST00000325083 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
PCM1-201ENST00000325083 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
PCM1-201ENST00000325083 SKOR2Q2VWA4 1001 aaPredicted RBP17.22■□□□□ 0.35
PCM1-201ENST00000325083 CPLX1O14810 134 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms