RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 RRP7AQ9Y3A4 280 aaKnown RBP20.67■□□□□ 0.9
BRD3-201ENST00000303407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.67■□□□□ 0.9
BRD3-201ENST00000303407 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
BRD3-201ENST00000303407 PLCB2Q00722 1185 aa20.67■□□□□ 0.9
BRD3-201ENST00000303407 NAP1L5Q96NT1 182 aaPredicted RBP20.67■□□□□ 0.9
BRD3-201ENST00000303407 TAOK2Q9UL54 1235 aa20.67■□□□□ 0.9
BRD3-201ENST00000303407 RRP1P56182 461 aaKnown RBP20.66■□□□□ 0.9
BRD3-201ENST00000303407 L1TD1Q5T7N2 865 aaKnown RBP20.66■□□□□ 0.9
BRD3-201ENST00000303407 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
BRD3-201ENST00000303407 EFCAB5A4FU69 1503 aa20.65■□□□□ 0.9
BRD3-201ENST00000303407 NAP1L2Q9ULW6 460 aaPredicted RBP20.65■□□□□ 0.9
BRD3-201ENST00000303407 KIF7Q2M1P5 1343 aa20.65■□□□□ 0.9
BRD3-201ENST00000303407 PLIN1O60240 522 aa20.64■□□□□ 0.9
BRD3-201ENST00000303407 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
BRD3-201ENST00000303407 SLKQ9H2G2 1235 aaPredicted RBP20.64■□□□□ 0.89
BRD3-201ENST00000303407 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
BRD3-201ENST00000303407 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
BRD3-201ENST00000303407 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
BRD3-201ENST00000303407 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
BRD3-201ENST00000303407 NESP48681 1621 aa20.61■□□□□ 0.89
BRD3-201ENST00000303407 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
BRD3-201ENST00000303407 EHBP1L1Q8N3D4 1523 aa20.6■□□□□ 0.89
BRD3-201ENST00000303407 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
BRD3-201ENST00000303407 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 TIAM1Q13009 1591 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 LMOD3Q0VAK6 560 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 CRBNQ96SW2 442 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 EID1Q9Y6B2 187 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 E9PSI1 815 aa20.59■□□□□ 0.89
BRD3-201ENST00000303407 CDK11BP21127 795 aaKnown RBP20.59■□□□□ 0.89
BRD3-201ENST00000303407 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.89
BRD3-201ENST00000303407 CENPQQ7L2Z9 268 aaPredicted RBP20.58■□□□□ 0.89
BRD3-201ENST00000303407 NPHP1O15259 732 aa20.57■□□□□ 0.88
BRD3-201ENST00000303407 GBP4Q96PP9 640 aa20.57■□□□□ 0.88
BRD3-201ENST00000303407 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
BRD3-201ENST00000303407 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
BRD3-201ENST00000303407 KIAA1211Q6ZU35 1233 aa20.56■□□□□ 0.88
BRD3-201ENST00000303407 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
BRD3-201ENST00000303407 NGDNQ8NEJ9 315 aaKnown RBP20.56■□□□□ 0.88
BRD3-201ENST00000303407 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
BRD3-201ENST00000303407 MIA2Q96PC5 1412 aa20.54■□□□□ 0.88
BRD3-201ENST00000303407 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
BRD3-201ENST00000303407 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
BRD3-201ENST00000303407 BCL2L13Q9BXK5 485 aa20.53■□□□□ 0.88
BRD3-201ENST00000303407 ARHGAP5Q13017 1502 aa20.53■□□□□ 0.88
BRD3-201ENST00000303407 PTMSP20962 102 aa20.53■□□□□ 0.88
BRD3-201ENST00000303407 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
BRD3-201ENST00000303407 AMPHP49418 695 aa20.52■□□□□ 0.88
BRD3-201ENST00000303407 PDE4AP27815 886 aa20.52■□□□□ 0.88
BRD3-201ENST00000303407 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
BRD3-201ENST00000303407 APAF1O14727 1248 aa20.52■□□□□ 0.88
BRD3-201ENST00000303407 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
BRD3-201ENST00000303407 GOLGA6L6A8MZA4 724 aa20.52■□□□□ 0.87
BRD3-201ENST00000303407 HMMRO75330 724 aa20.51■□□□□ 0.87
BRD3-201ENST00000303407 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
BRD3-201ENST00000303407 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
BRD3-201ENST00000303407 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
BRD3-201ENST00000303407 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
BRD3-201ENST00000303407 MSNP26038 577 aaKnown RBP20.48■□□□□ 0.87
BRD3-201ENST00000303407 COG3Q96JB2 828 aa20.48■□□□□ 0.87
BRD3-201ENST00000303407 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
BRD3-201ENST00000303407 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
BRD3-201ENST00000303407 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
BRD3-201ENST00000303407 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
BRD3-201ENST00000303407 LTV1Q96GA3 475 aaPredicted RBP20.47■□□□□ 0.87
BRD3-201ENST00000303407 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
BRD3-201ENST00000303407 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
BRD3-201ENST00000303407 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
BRD3-201ENST00000303407 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
BRD3-201ENST00000303407 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
BRD3-201ENST00000303407 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
BRD3-201ENST00000303407 FOXD4L1Q9NU39 408 aa20.44■□□□□ 0.86
BRD3-201ENST00000303407 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
BRD3-201ENST00000303407 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
BRD3-201ENST00000303407 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
BRD3-201ENST00000303407 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
BRD3-201ENST00000303407 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
BRD3-201ENST00000303407 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
BRD3-201ENST00000303407 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
BRD3-201ENST00000303407 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
BRD3-201ENST00000303407 KIAA1107Q9UPP5 1409 aa20.4■□□□□ 0.86
BRD3-201ENST00000303407 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
BRD3-201ENST00000303407 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.86
BRD3-201ENST00000303407 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.86
BRD3-201ENST00000303407 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 DRC7Q8IY82 874 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 GOLGA6L3A6NEY3 463 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
BRD3-201ENST00000303407 DAPK1P53355 1430 aa20.38■□□□□ 0.85
BRD3-201ENST00000303407 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
BRD3-201ENST00000303407 CHMP3Q9Y3E7 222 aa20.38■□□□□ 0.85
BRD3-201ENST00000303407 NRDCO43847 1150 aa20.37■□□□□ 0.85
BRD3-201ENST00000303407 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
BRD3-201ENST00000303407 HDAC5Q9UQL6 1122 aa20.37■□□□□ 0.85
BRD3-201ENST00000303407 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
BRD3-201ENST00000303407 RIPK4P57078 832 aa20.36■□□□□ 0.85
BRD3-201ENST00000303407 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
BRD3-201ENST00000303407 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms