RNA–Protein interactions for RNA: ENST00000284483.12

TNIK-201, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-201ENST00000284483 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
TNIK-201ENST00000284483 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
TNIK-201ENST00000284483 ARHGAP35Q9NRY4 1499 aa11.6□□□□□ -0.55
TNIK-201ENST00000284483 ZBTB22O15209 634 aa11.6□□□□□ -0.55
TNIK-201ENST00000284483 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
TNIK-201ENST00000284483 TEX2Q8IWB9 1127 aa11.59□□□□□ -0.55
TNIK-201ENST00000284483 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
TNIK-201ENST00000284483 MRE11P49959 708 aa11.58□□□□□ -0.56
TNIK-201ENST00000284483 TMF1P82094 1093 aa11.58□□□□□ -0.56
TNIK-201ENST00000284483 PDE3BQ13370 1112 aa11.58□□□□□ -0.56
TNIK-201ENST00000284483 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
TNIK-201ENST00000284483 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
TNIK-201ENST00000284483 CFAP53Q96M91 514 aa11.57□□□□□ -0.56
TNIK-201ENST00000284483 KIF7Q2M1P5 1343 aa11.57□□□□□ -0.56
TNIK-201ENST00000284483 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
TNIK-201ENST00000284483 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 CHAF1AQ13111 956 aaPredicted RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 WIZO95785 1651 aa11.56□□□□□ -0.56
TNIK-201ENST00000284483 OFD1O75665 1012 aa11.56□□□□□ -0.56
TNIK-201ENST00000284483 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
TNIK-201ENST00000284483 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 R3HCC1Q9Y3T6 440 aaKnown RBP11.56□□□□□ -0.56
TNIK-201ENST00000284483 GRPEL1Q9HAV7 217 aa11.55□□□□□ -0.56
TNIK-201ENST00000284483 E9PSI1 815 aa11.55□□□□□ -0.56
TNIK-201ENST00000284483 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
TNIK-201ENST00000284483 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
TNIK-201ENST00000284483 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
TNIK-201ENST00000284483 CHRM1P11229 460 aaPredicted RBP11.55□□□□□ -0.56
TNIK-201ENST00000284483 KIAA2012Q0VF49 1180 aa11.55□□□□□ -0.56
TNIK-201ENST00000284483 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
TNIK-201ENST00000284483 CDCA8Q53HL2 280 aa11.54□□□□□ -0.56
TNIK-201ENST00000284483 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
TNIK-201ENST00000284483 KIF20AO95235 890 aa11.54□□□□□ -0.56
TNIK-201ENST00000284483 C8orf34Q49A92 452 aa11.54□□□□□ -0.56
TNIK-201ENST00000284483 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
TNIK-201ENST00000284483 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
TNIK-201ENST00000284483 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
TNIK-201ENST00000284483 BAZ1AQ9NRL2 1556 aaPredicted RBP11.52□□□□□ -0.56
TNIK-201ENST00000284483 UQCRHLA0A096LP55 91 aa11.52□□□□□ -0.57
TNIK-201ENST00000284483 UQCRHP07919 91 aa11.52□□□□□ -0.57
TNIK-201ENST00000284483 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.52□□□□□ -0.57
TNIK-201ENST00000284483 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
TNIK-201ENST00000284483 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.57
TNIK-201ENST00000284483 DRC7Q8IY82 874 aa11.52□□□□□ -0.57
TNIK-201ENST00000284483 TERF1P54274 439 aa11.51□□□□□ -0.57
TNIK-201ENST00000284483 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
TNIK-201ENST00000284483 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
TNIK-201ENST00000284483 CCDC94Q9BW85 323 aaPredicted RBP11.51□□□□□ -0.57
TNIK-201ENST00000284483 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
TNIK-201ENST00000284483 APAF1O14727 1248 aa11.5□□□□□ -0.57
TNIK-201ENST00000284483 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
TNIK-201ENST00000284483 PANK3Q9H999 370 aa11.5□□□□□ -0.57
TNIK-201ENST00000284483 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
TNIK-201ENST00000284483 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
TNIK-201ENST00000284483 RGS22Q8NE09 1264 aa11.5□□□□□ -0.57
TNIK-201ENST00000284483 TRAK2O60296 914 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 LETM1O95202 739 aaPredicted RBP11.49□□□□□ -0.57
TNIK-201ENST00000284483 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
TNIK-201ENST00000284483 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 CHMP5Q9NZZ3 219 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 CGNQ9P2M7 1197 aaKnown RBP11.49□□□□□ -0.57
TNIK-201ENST00000284483 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
TNIK-201ENST00000284483 IRX3P78415 501 aaPredicted RBP11.49□□□□□ -0.57
TNIK-201ENST00000284483 CBX1P83916 185 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
TNIK-201ENST00000284483 MORC1Q86VD1 984 aa11.49□□□□□ -0.57
TNIK-201ENST00000284483 KIF21BO75037 1637 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 USP47Q96K76 1375 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 SMC4Q9NTJ3 1288 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 MCM4P33991 863 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
TNIK-201ENST00000284483 SAFB2Q14151 953 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNIK-201ENST00000284483 ZSCAN30Q86W11 494 aa11.47□□□□□ -0.57
TNIK-201ENST00000284483 PANK1Q8TE04 598 aa11.47□□□□□ -0.57
TNIK-201ENST00000284483 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
TNIK-201ENST00000284483 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
TNIK-201ENST00000284483 CCDC18Q5T9S5 1454 aa11.46□□□□□ -0.57
TNIK-201ENST00000284483 ZRSR1Q15695 479 aaKnown RBP11.46□□□□□ -0.57
TNIK-201ENST00000284483 MPNDQ8N594 471 aa11.46□□□□□ -0.57
TNIK-201ENST00000284483 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.58
TNIK-201ENST00000284483 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
TNIK-201ENST00000284483 NUP155O75694 1391 aa11.45□□□□□ -0.58
TNIK-201ENST00000284483 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
TNIK-201ENST00000284483 IGSF3O75054 1194 aa11.45□□□□□ -0.58
TNIK-201ENST00000284483 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
TNIK-201ENST00000284483 PNISRQ8TF01 805 aaKnown RBP11.44□□□□□ -0.58
TNIK-201ENST00000284483 TNNT3P45378 269 aaPredicted RBP11.44□□□□□ -0.58
TNIK-201ENST00000284483 GAS2L3Q86XJ1 694 aa11.44□□□□□ -0.58
TNIK-201ENST00000284483 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
TNIK-201ENST00000284483 KCNG1Q9UIX4 513 aa11.43□□□□□ -0.58
TNIK-201ENST00000284483 NASPP49321 788 aaPredicted RBP11.43□□□□□ -0.58
TNIK-201ENST00000284483 C22orf23Q9BZE7 217 aa11.43□□□□□ -0.58
TNIK-201ENST00000284483 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
TNIK-201ENST00000284483 TAF3Q5VWG9 929 aa11.42□□□□□ -0.58
TNIK-201ENST00000284483 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms