RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 NrdcQ8BHG1 1161 aa21.41■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Rock1P70335 1354 aa21.41■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Fam71e1A1L3C1 212 aa21.4■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Myt1Q8CFC2 1127 aa21.4■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Polr3aB2RXC6 1390 aa21.4■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Trappc8E9PWG2 1437 aa21.4■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Cfap74Q3UY96 1578 aa21.4■■□□□ 1.02
Sdc1-205ENSMUST00000171158 Grwd1Q810D6 446 aaKnown RBP21.38■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Kiaa1210E9Q0C6 1637 aa21.38■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Washc2Q6PGL7 1334 aa21.38■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Hecw1Q8K4P8 1604 aa21.38■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Gm14025A2AP89 1413 aa21.37■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Clstn2Q9ER65 966 aa21.37■■□□□ 1.01
Sdc1-205ENSMUST00000171158 NhsB1AV60 1647 aa21.36■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Rock2P70336 1388 aa21.36■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Rrp7aQ9D1C9 280 aaKnown RBP21.35■■□□□ 1.01
Sdc1-205ENSMUST00000171158 Cd109Q8R422 1442 aa21.32■■□□□ 1
Sdc1-205ENSMUST00000171158 Atp7aQ64430 1491 aa21.32■■□□□ 1
Sdc1-205ENSMUST00000171158 Eif5bQ05D44 1216 aaKnown RBP21.32■■□□□ 1
Sdc1-205ENSMUST00000171158 Sart1Q9Z315 806 aaKnown RBP21.32■■□□□ 1
Sdc1-205ENSMUST00000171158 Abcc3B2RX12 1523 aa21.31■■□□□ 1
Sdc1-205ENSMUST00000171158 Cdc42bpbQ7TT50 1713 aa21.3■■□□□ 1
Sdc1-205ENSMUST00000171158 Setd1aE9PYH6 1716 aa21.3■■□□□ 1
Sdc1-205ENSMUST00000171158 Chd1P40201 1711 aa21.29■■□□□ 1
Sdc1-205ENSMUST00000171158 Gapvd1Q6PAR5 1458 aa21.29■■□□□ 1
Sdc1-205ENSMUST00000171158 Tarbp1E9Q368 1579 aa21.28■■□□□ 1
Sdc1-205ENSMUST00000171158 Ppip5k1A2ARP1 1436 aa21.27■■□□□ 1
Sdc1-205ENSMUST00000171158 Tubgcp6G5E8P0 1769 aa21.27■■□□□ 1
Sdc1-205ENSMUST00000171158 Nolc1E9Q5C9 702 aaKnown RBP21.27■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Abca8bQ8K440 1620 aa21.26■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Zbtb7cQ8VCZ7 619 aa21.26■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Abcc1O35379 1528 aa21.25■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Robo2Q7TPD3 1470 aa21.24■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Kdm5cP41230 1554 aa21.24■□□□□ 0.99
Sdc1-205ENSMUST00000171158 AI481877A2ALV5 1481 aa21.23■□□□□ 0.99
Sdc1-205ENSMUST00000171158 Cep170Q6A065 1588 aa21.2■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Adamts13Q769J6 1426 aa21.19■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Prdm16A2A935 1275 aa21.19■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Spag9Q58A65 1321 aaKnown RBP21.19■□□□□ 0.98
Sdc1-205ENSMUST00000171158 P3h3Q8CG70 732 aa21.18■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Atp10dQ8K2X1 1416 aa21.18■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Ofd1Q80Z25 1017 aa21.17■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Kidins220E9Q9B7 1793 aa21.16■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Abca17E9PX95 1733 aa21.16■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Wdr43Q6ZQL4 677 aaKnown RBP21.16■□□□□ 0.98
Sdc1-205ENSMUST00000171158 ShprhQ7TPQ3 1674 aa21.15■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Kif1bQ60575 1816 aaKnown RBP21.14■□□□□ 0.98
Sdc1-205ENSMUST00000171158 Usp54Q8BL06 1588 aaKnown RBP21.14■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Edc4Q3UJB9 1406 aaKnown RBP21.13■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Pde4cQ3UEI1 686 aa21.12■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Ppp4r2Q0VGB7 417 aa21.11■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Map3k5O35099 1380 aa21.11■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Ifit1bl1D3Z6F0 470 aa21.1■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Xrn1P97789 1719 aaKnown RBP21.1■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Tulp4Q9JIL5 1547 aa21.09■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Znf608Q56A10 1511 aa21.08■□□□□ 0.97
Sdc1-205ENSMUST00000171158 Rpgrip1lQ8CG73 1264 aa21.07■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Supt16hQ920B9 1047 aa21.07■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Nsd2Q8BVE8 1365 aa21.07■□□□□ 0.96
Sdc1-205ENSMUST00000171158 L3mbtl2P59178 703 aa21.06■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Zmym4A2A791 1549 aaKnown RBP21.04■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Zbtb4Q5F293 982 aa21.04■□□□□ 0.96
Sdc1-205ENSMUST00000171158 PrxO55103 1391 aa21.03■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Plch2A2AP18 1501 aa21.03■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Hdac5Q9Z2V6 1113 aa21.03■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Anp32bQ9EST5 272 aaKnown RBP21.03■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Myo5cE9Q1F5 1742 aa21.02■□□□□ 0.96
Sdc1-205ENSMUST00000171158 Mroh3A0A1D5RM54 893 aa21.01■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Igf1rQ60751 1373 aa21.01■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Zscan21Q07231 555 aa21.01■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Uggt2E9Q4X2 1504 aa21■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Ttbk1Q6PCN3 1308 aa21■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Zfyve16Q80U44 1528 aa21■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Abcc6Q9R1S7 1498 aa20.99■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Pank3Q8R2W9 370 aa20.99■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Kank1E9Q238 1360 aa20.99■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Sbno1Q689Z5 1390 aa20.99■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Pola1P33609 1465 aa20.97■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Ylpm1Q9R0I7 1386 aaKnown RBP20.97■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Dnajc5P60904 198 aa20.96■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Q7TT23 1179 aa20.96■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Abca9Q8K449 1623 aa20.96■□□□□ 0.95
Sdc1-205ENSMUST00000171158 Mak16Q8BGS0 296 aaKnown RBP20.95■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Inpp5dQ9ES52 1191 aa20.95■□□□□ 0.94
Sdc1-205ENSMUST00000171158 AnkarA2RT91 1465 aa20.95■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Tex14Q7M6U3 1450 aa20.94■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Nos1Q9Z0J4 1429 aa20.94■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Erbb3Q61526 1339 aa20.94■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Zscan10Q3URR7 782 aa20.93■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Fndc1E9Q043 1732 aa20.93■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Zfp444Q3TDV8 331 aaKnown RBP20.93■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Ythdc2B2RR83 1445 aaKnown RBP20.92■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Rtl5Q5DTT4 599 aa20.92■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Tmem131lQ3U3D7 1597 aa20.92■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Tmf1B9EKI3 1091 aa20.9■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Liat1Q810M6 228 aa20.9■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Gm16486A0A1D5RMD1 1434 aa20.9■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Itsn2Q9Z0R6 1659 aa20.9■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Erich6D3Z6S9 713 aa20.89■□□□□ 0.94
Sdc1-205ENSMUST00000171158 Srcin1Q9QWI6 1250 aa20.89■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms