RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Plch2A2AP18 1501 aa24.44■■□□□ 1.5
Tpm1-215ENSMUST00000113705 Topbp1Q6ZQF0 1515 aa24.44■■□□□ 1.5
Tpm1-215ENSMUST00000113705 CltcQ68FD5 1675 aaKnown RBP24.44■■□□□ 1.5
Tpm1-215ENSMUST00000113705 UacaQ8CGB3 1411 aa24.42■■□□□ 1.5
Tpm1-215ENSMUST00000113705 Talpid3E9PV87 1520 aa24.42■■□□□ 1.5
Tpm1-215ENSMUST00000113705 Uggt2E9Q4X2 1504 aa24.42■■□□□ 1.5
Tpm1-215ENSMUST00000113705 Trpm2Q91YD4 1506 aa24.42■■□□□ 1.5
Tpm1-215ENSMUST00000113705 NclP09405 707 aaKnown RBP24.39■■□□□ 1.5
Tpm1-215ENSMUST00000113705 Hnrnpul2Q00PI9 745 aaKnown RBP24.38■■□□□ 1.49
Tpm1-215ENSMUST00000113705 Naip5Q9R016 1403 aa24.38■■□□□ 1.49
Tpm1-215ENSMUST00000113705 Ahdc1Q6PAL7 1594 aaKnown RBP24.35■■□□□ 1.49
Tpm1-215ENSMUST00000113705 4930407I10RikD3Z5T8 1512 aa24.35■■□□□ 1.49
Tpm1-215ENSMUST00000113705 Rfx7F8VPJ6 1459 aa24.35■■□□□ 1.49
Tpm1-215ENSMUST00000113705 RictorQ6QI06 1708 aa24.34■■□□□ 1.49
Tpm1-215ENSMUST00000113705 ShprhQ7TPQ3 1674 aa24.34■■□□□ 1.49
Tpm1-215ENSMUST00000113705 Myo5cE9Q1F5 1742 aa24.32■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Vps8Q0P5W1 1427 aa24.32■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Dip2bQ3UH60 1574 aa24.31■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Gm13697A2AK42 830 aa24.29■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Ercc6l2Q9JIM3 1537 aa24.29■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Kif1bQ60575 1816 aaKnown RBP24.29■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Zfp644E9QA22 1323 aa24.28■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Knl1Q66JQ7 1612 aa24.28■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Prex1Q69ZK0 1650 aa24.27■■□□□ 1.48
Tpm1-215ENSMUST00000113705 Ube2uB1AUC4 352 aa24.26■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Pde4cQ3UEI1 686 aa24.26■■□□□ 1.47
Tpm1-215ENSMUST00000113705 AlkP97793 1621 aa24.26■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Rsph4aQ8BYM7 716 aa24.24■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Arhgap23Q69ZH9 1483 aa24.23■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Mia2Q91ZV0 1396 aa24.23■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Topaz1E5FYH1 1653 aa24.23■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Nup155Q99P88 1391 aaKnown RBP24.22■■□□□ 1.47
Tpm1-215ENSMUST00000113705 Map4P27546 1125 aaKnown RBP24.2■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Asxl1P59598 1514 aa24.18■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Fhad1A6PWD2 1420 aa24.16■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Hfm1D3Z4R1 1434 aa24.16■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Med14A2ABV5 1459 aaKnown RBP24.15■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Clstn2Q9ER65 966 aa24.14■■□□□ 1.46
Tpm1-215ENSMUST00000113705 Scn4aQ9ER60 1841 aa24.14■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Robo2Q7TPD3 1470 aa24.13■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Adamts7Q68SA9 1657 aa24.12■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Abcc6Q9R1S7 1498 aa24.11■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Ttll5Q8CHB8 1328 aa24.09■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Bcl9Q9D219 1425 aa24.08■■□□□ 1.45
Tpm1-215ENSMUST00000113705 Akap12Q9WTQ5 1684 aa24.07■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Tmem131lQ3U3D7 1597 aa24.06■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Ttc21bQ0HA38 1315 aa24.05■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Dip2aQ8BWT5 1523 aa24.05■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Ylpm1Q9R0I7 1386 aaKnown RBP24.04■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Myom3A2ABU4 1439 aa24.04■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Cd109Q8R422 1442 aa24.03■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Adgrb3Q80ZF8 1522 aa24.02■■□□□ 1.44
Tpm1-215ENSMUST00000113705 AnkarA2RT91 1465 aa24.02■■□□□ 1.44
Tpm1-215ENSMUST00000113705 Trak1Q6PD31 939 aa24.01■■□□□ 1.43
Tpm1-215ENSMUST00000113705 Erich6D3Z6S9 713 aa24■■□□□ 1.43
Tpm1-215ENSMUST00000113705 Pip4k2bQ80XI4 416 aa24■■□□□ 1.43
Tpm1-215ENSMUST00000113705 Nsd2Q8BVE8 1365 aa24■■□□□ 1.43
Tpm1-215ENSMUST00000113705 GphnQ8BUV3 769 aaKnown RBP23.96■■□□□ 1.43
Tpm1-215ENSMUST00000113705 Lamc1P02468 1607 aaKnown RBP23.95■■□□□ 1.43
Tpm1-215ENSMUST00000113705 PtprgQ05909 1442 aa23.94■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Ino80Q6ZPV2 1559 aa23.92■■□□□ 1.42
Tpm1-215ENSMUST00000113705 DroshaQ5HZJ0 1373 aaKnown RBP23.91■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Skint5A7XUY5 1461 aa23.91■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Rimbp3Q3V0F0 1606 aa23.91■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Chd2E9PZM4 1827 aaKnown RBP23.91■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Prdm2A2A7B5 1709 aaKnown RBP23.9■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Kif13aQ9EQW7 1749 aa23.9■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Mphosph9A6H5Y1 991 aa23.9■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Iqgap3F8VQ29 1632 aa23.89■■□□□ 1.42
Tpm1-215ENSMUST00000113705 Atp7aQ64430 1491 aa23.89■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Phlpp1Q8CHE4 1687 aa23.88■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Ncoa1P70365 1447 aa23.88■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Scaf11E9PZM7 1456 aaKnown RBP23.87■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Ltbp4Q8K4G1 1666 aa23.87■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Stk24Q99KH8 431 aa23.86■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Arid4bA2CG63 1314 aaKnown RBP23.85■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Itsn1Q9Z0R4 1714 aa23.85■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Rims2Q9EQZ7 1530 aa23.84■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Tarbp1E9Q368 1579 aa23.83■■□□□ 1.41
Tpm1-215ENSMUST00000113705 Kif21bQ9QXL1 1668 aa23.82■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Mier1Q5UAK0 511 aa23.82■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Efcab6Q6P1E8 1516 aa23.82■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Dhx9O70133 1380 aaKnown RBP23.81■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Kdm5aQ3UXZ9 1690 aa23.81■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Tecpr2Q3UH45 1423 aa23.79■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Naip7Q9JIB3 1402 aa23.79■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Sall3Q62255 1320 aa23.78■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Txndc2Q6P902 515 aa23.78■■□□□ 1.4
Tpm1-215ENSMUST00000113705 P3h3Q8CG70 732 aa23.78■■□□□ 1.4
Tpm1-215ENSMUST00000113705 Edc4Q3UJB9 1406 aaKnown RBP23.76■■□□□ 1.39
Tpm1-215ENSMUST00000113705 ErbinQ80TH2 1402 aa23.76■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Pkd2O35245 966 aa23.75■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Uggt1Q6P5E4 1551 aa23.74■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Pik3c2gO70167 1506 aa23.74■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Ccer2J3QPU5 274 aa23.73■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Abca8aQ8K442 1620 aa23.72■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Gm13695A2AK44 830 aa23.72■■□□□ 1.39
Tpm1-215ENSMUST00000113705 Ehbp1l1Q99MS7 1716 aa23.7■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Prrc2bQ7TPM1 1486 aaKnown RBP23.69■■□□□ 1.38
Tpm1-215ENSMUST00000113705 Mroh1E0CZ22 1640 aa23.67■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms