RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Gli2Q0VGT2 1544 aa29.18■■■□□ 2.26
Trim3-203ENSMUST00000106791 Plch2A2AP18 1501 aa29.18■■■□□ 2.26
Trim3-203ENSMUST00000106791 ShprhQ7TPQ3 1674 aa29.17■■■□□ 2.26
Trim3-203ENSMUST00000106791 Naip6Q9JIB6 1403 aa29.17■■■□□ 2.26
Trim3-203ENSMUST00000106791 Topbp1Q6ZQF0 1515 aa29.16■■■□□ 2.26
Trim3-203ENSMUST00000106791 Cul9Q80TT8 1865 aa29.16■■■□□ 2.26
Trim3-203ENSMUST00000106791 Trak1Q6PD31 939 aa29.16■■■□□ 2.26
Trim3-203ENSMUST00000106791 Supt6hQ62383 1726 aaKnown RBP29.16■■■□□ 2.26
Trim3-203ENSMUST00000106791 PtprgQ05909 1442 aa29.15■■■□□ 2.26
Trim3-203ENSMUST00000106791 Asxl1P59598 1514 aa29.15■■■□□ 2.26
Trim3-203ENSMUST00000106791 Kif21bQ9QXL1 1668 aa29.14■■■□□ 2.26
Trim3-203ENSMUST00000106791 Hnrnpul2Q00PI9 745 aaKnown RBP29.13■■■□□ 2.25
Trim3-203ENSMUST00000106791 Pkd2O35245 966 aa29.12■■■□□ 2.25
Trim3-203ENSMUST00000106791 Robo2Q7TPD3 1470 aa29.12■■■□□ 2.25
Trim3-203ENSMUST00000106791 Zmym4A2A791 1549 aaKnown RBP29.11■■■□□ 2.25
Trim3-203ENSMUST00000106791 Kif1bQ60575 1816 aaKnown RBP29.11■■■□□ 2.25
Trim3-203ENSMUST00000106791 Dnajc5gQ8C632 165 aa29.11■■■□□ 2.25
Trim3-203ENSMUST00000106791 Uggt2E9Q4X2 1504 aa29.09■■■□□ 2.25
Trim3-203ENSMUST00000106791 Trpm1Q2TV84 1622 aa29.09■■■□□ 2.25
Trim3-203ENSMUST00000106791 NpatQ8BMA5 1420 aa29.08■■■□□ 2.25
Trim3-203ENSMUST00000106791 Cd109Q8R422 1442 aa29.06■■■□□ 2.24
Trim3-203ENSMUST00000106791 Myo5cE9Q1F5 1742 aa29.05■■■□□ 2.24
Trim3-203ENSMUST00000106791 TonslQ6NZL6 1363 aa29.04■■■□□ 2.24
Trim3-203ENSMUST00000106791 Qser1A2BIE1 1698 aa29.03■■■□□ 2.24
Trim3-203ENSMUST00000106791 Hspa5P20029 655 aaKnown RBP29.02■■■□□ 2.24
Trim3-203ENSMUST00000106791 Myom3A2ABU4 1439 aa29.01■■■□□ 2.23
Trim3-203ENSMUST00000106791 Dhx9O70133 1380 aaKnown RBP29.01■■■□□ 2.23
Trim3-203ENSMUST00000106791 Kif14L0N7N1 1674 aaKnown RBP29.01■■■□□ 2.23
Trim3-203ENSMUST00000106791 Nsd2Q8BVE8 1365 aa29■■■□□ 2.23
Trim3-203ENSMUST00000106791 Cfap65Q3V0B4 1847 aa28.98■■■□□ 2.23
Trim3-203ENSMUST00000106791 Ylpm1Q9R0I7 1386 aaKnown RBP28.97■■■□□ 2.23
Trim3-203ENSMUST00000106791 Plppr3Q7TPB0 716 aa28.96■■■□□ 2.23
Trim3-203ENSMUST00000106791 Abca6Q8K441 1624 aa28.95■■■□□ 2.23
Trim3-203ENSMUST00000106791 Naip5Q9R016 1403 aa28.95■■■□□ 2.22
Trim3-203ENSMUST00000106791 Atp7aQ64430 1491 aa28.94■■■□□ 2.22
Trim3-203ENSMUST00000106791 Pik3c2gO70167 1506 aa28.93■■■□□ 2.22
Trim3-203ENSMUST00000106791 Rprd2Q6NXI6 1469 aaKnown RBP28.92■■■□□ 2.22
Trim3-203ENSMUST00000106791 Prex1Q69ZK0 1650 aa28.91■■■□□ 2.22
Trim3-203ENSMUST00000106791 Ttc21bQ0HA38 1315 aa28.9■■■□□ 2.22
Trim3-203ENSMUST00000106791 Tmem131lQ3U3D7 1597 aa28.9■■■□□ 2.22
Trim3-203ENSMUST00000106791 Usp47Q8BY87 1376 aa28.9■■■□□ 2.22
Trim3-203ENSMUST00000106791 AnkarA2RT91 1465 aa28.89■■■□□ 2.22
Trim3-203ENSMUST00000106791 DroshaQ5HZJ0 1373 aaKnown RBP28.89■■■□□ 2.22
Trim3-203ENSMUST00000106791 Afap1Q80YS6 731 aa28.86■■■□□ 2.21
Trim3-203ENSMUST00000106791 Rsph4aQ8BYM7 716 aa28.86■■■□□ 2.21
Trim3-203ENSMUST00000106791 Camsap2Q8C1B1 1461 aa28.86■■■□□ 2.21
Trim3-203ENSMUST00000106791 Adamtsl3G3UXC7 1706 aa28.84■■■□□ 2.21
Trim3-203ENSMUST00000106791 Las1lA2BE28 776 aaKnown RBP28.81■■■□□ 2.2
Trim3-203ENSMUST00000106791 Dot1lQ6XZL8 1540 aa28.8■■■□□ 2.2
Trim3-203ENSMUST00000106791 Edc4Q3UJB9 1406 aaKnown RBP28.8■■■□□ 2.2
Trim3-203ENSMUST00000106791 Hdac5Q9Z2V6 1113 aa28.79■■■□□ 2.2
Trim3-203ENSMUST00000106791 Adamts7Q68SA9 1657 aa28.77■■■□□ 2.2
Trim3-203ENSMUST00000106791 Tarbp1E9Q368 1579 aa28.76■■■□□ 2.19
Trim3-203ENSMUST00000106791 Ppip5k1A2ARP1 1436 aa28.75■■■□□ 2.19
Trim3-203ENSMUST00000106791 Rock1P70335 1354 aa28.74■■■□□ 2.19
Trim3-203ENSMUST00000106791 Talpid3E9PV87 1520 aa28.73■■■□□ 2.19
Trim3-203ENSMUST00000106791 Erich6D3Z6S9 713 aa28.72■■■□□ 2.19
Trim3-203ENSMUST00000106791 CltcQ68FD5 1675 aaKnown RBP28.7■■■□□ 2.18
Trim3-203ENSMUST00000106791 Iqgap3F8VQ29 1632 aa28.69■■■□□ 2.18
Trim3-203ENSMUST00000106791 Akap12Q9WTQ5 1684 aa28.68■■■□□ 2.18
Trim3-203ENSMUST00000106791 Hfm1D3Z4R1 1434 aa28.68■■■□□ 2.18
Trim3-203ENSMUST00000106791 Rgl3Q3UYI5 709 aa28.68■■■□□ 2.18
Trim3-203ENSMUST00000106791 Myom2Q14BI5 1463 aa28.68■■■□□ 2.18
Trim3-203ENSMUST00000106791 Arhgap23Q69ZH9 1483 aa28.67■■■□□ 2.18
Trim3-203ENSMUST00000106791 Safb2Q80YR5 991 aaKnown RBP28.66■■■□□ 2.18
Trim3-203ENSMUST00000106791 Tecpr2Q3UH45 1423 aa28.66■■■□□ 2.18
Trim3-203ENSMUST00000106791 Washc2Q6PGL7 1334 aa28.64■■■□□ 2.18
Trim3-203ENSMUST00000106791 RictorQ6QI06 1708 aa28.64■■■□□ 2.17
Trim3-203ENSMUST00000106791 Alpk3Q924C5 1678 aa28.63■■■□□ 2.17
Trim3-203ENSMUST00000106791 Ino80Q6ZPV2 1559 aa28.63■■■□□ 2.17
Trim3-203ENSMUST00000106791 Knl1Q66JQ7 1612 aa28.62■■■□□ 2.17
Trim3-203ENSMUST00000106791 ErbinQ80TH2 1402 aa28.62■■■□□ 2.17
Trim3-203ENSMUST00000106791 Stk24Q99KH8 431 aa28.58■■■□□ 2.17
Trim3-203ENSMUST00000106791 Sall3Q62255 1320 aa28.57■■■□□ 2.16
Trim3-203ENSMUST00000106791 Abca8aQ8K442 1620 aa28.56■■■□□ 2.16
Trim3-203ENSMUST00000106791 Mroh3A0A1D5RM54 893 aa28.55■■■□□ 2.16
Trim3-203ENSMUST00000106791 Neurod1Q60867 357 aa28.54■■■□□ 2.16
Trim3-203ENSMUST00000106791 Adgrb3Q80ZF8 1522 aa28.54■■■□□ 2.16
Trim3-203ENSMUST00000106791 Skint5A7XUY5 1461 aa28.53■■■□□ 2.16
Trim3-203ENSMUST00000106791 Efcab6Q6P1E8 1516 aa28.53■■■□□ 2.16
Trim3-203ENSMUST00000106791 Med14A2ABV5 1459 aaKnown RBP28.53■■■□□ 2.16
Trim3-203ENSMUST00000106791 Abcc6Q9R1S7 1498 aa28.52■■■□□ 2.16
Trim3-203ENSMUST00000106791 AatkQ80YE4 1365 aa28.51■■■□□ 2.15
Trim3-203ENSMUST00000106791 Gm13697A2AK42 830 aa28.5■■■□□ 2.15
Trim3-203ENSMUST00000106791 Uggt1Q6P5E4 1551 aa28.5■■■□□ 2.15
Trim3-203ENSMUST00000106791 Ppargc1bQ8VHJ7 1014 aa28.49■■■□□ 2.15
Trim3-203ENSMUST00000106791 Ahdc1Q6PAL7 1594 aaKnown RBP28.49■■■□□ 2.15
Trim3-203ENSMUST00000106791 Prdm2A2A7B5 1709 aaKnown RBP28.48■■■□□ 2.15
Trim3-203ENSMUST00000106791 MlecQ6ZQI3 291 aaKnown RBP28.48■■■□□ 2.15
Trim3-203ENSMUST00000106791 Adamts13Q769J6 1426 aa28.47■■■□□ 2.15
Trim3-203ENSMUST00000106791 Mbd5B1AYB6 1498 aa28.46■■■□□ 2.15
Trim3-203ENSMUST00000106791 Ehbp1l1Q99MS7 1716 aa28.45■■■□□ 2.15
Trim3-203ENSMUST00000106791 Grwd1Q810D6 446 aaKnown RBP28.44■■■□□ 2.14
Trim3-203ENSMUST00000106791 Polr3aB2RXC6 1390 aa28.43■■■□□ 2.14
Trim3-203ENSMUST00000106791 Tulp4Q9JIL5 1547 aa28.43■■■□□ 2.14
Trim3-203ENSMUST00000106791 Iqgap1Q9JKF1 1657 aaKnown RBP28.43■■■□□ 2.14
Trim3-203ENSMUST00000106791 Cpsf1Q9EPU4 1441 aaKnown RBP28.42■■■□□ 2.14
Trim3-203ENSMUST00000106791 Ercc6l2Q9JIM3 1537 aa28.4■■■□□ 2.14
Trim3-203ENSMUST00000106791 Ifit1bl1D3Z6F0 470 aa28.4■■■□□ 2.14
Trim3-203ENSMUST00000106791 Mug2P28666 1451 aa28.4■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms