RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Nos1Q9Z0J4 1429 aa25.72■■□□□ 1.71
Trim47-202ENSMUST00000106441 Cul9Q80TT8 1865 aa25.72■■□□□ 1.71
Trim47-202ENSMUST00000106441 Ssh2Q5SW75 1423 aa25.7■■□□□ 1.7
Trim47-202ENSMUST00000106441 Gm38655A0A286YDK6 273 aa25.69■■□□□ 1.7
Trim47-202ENSMUST00000106441 AlkP97793 1621 aa25.67■■□□□ 1.7
Trim47-202ENSMUST00000106441 Abca17E9PX95 1733 aa25.67■■□□□ 1.7
Trim47-202ENSMUST00000106441 Fhod3Q76LL6 1578 aa25.66■■□□□ 1.7
Trim47-202ENSMUST00000106441 Yeats2Q3TUF7 1407 aa25.66■■□□□ 1.7
Trim47-202ENSMUST00000106441 Hnrnpul2Q00PI9 745 aaKnown RBP25.65■■□□□ 1.7
Trim47-202ENSMUST00000106441 Cdc42bpgQ80UW5 1551 aa25.64■■□□□ 1.7
Trim47-202ENSMUST00000106441 Spag9Q58A65 1321 aaKnown RBP25.64■■□□□ 1.69
Trim47-202ENSMUST00000106441 Znf518aB2RRF6 1478 aaKnown RBP25.62■■□□□ 1.69
Trim47-202ENSMUST00000106441 Zfp644E9QA22 1323 aa25.62■■□□□ 1.69
Trim47-202ENSMUST00000106441 Hspa5P20029 655 aaKnown RBP25.6■■□□□ 1.69
Trim47-202ENSMUST00000106441 Usp54Q8BL06 1588 aaKnown RBP25.59■■□□□ 1.69
Trim47-202ENSMUST00000106441 Nup155Q99P88 1391 aaKnown RBP25.58■■□□□ 1.68
Trim47-202ENSMUST00000106441 Qser1A2BIE1 1698 aa25.57■■□□□ 1.68
Trim47-202ENSMUST00000106441 Zbtb7cQ8VCZ7 619 aa25.57■■□□□ 1.68
Trim47-202ENSMUST00000106441 Trpm2Q91YD4 1506 aa25.57■■□□□ 1.68
Trim47-202ENSMUST00000106441 Gli2Q0VGT2 1544 aa25.56■■□□□ 1.68
Trim47-202ENSMUST00000106441 Kif14L0N7N1 1674 aaKnown RBP25.56■■□□□ 1.68
Trim47-202ENSMUST00000106441 Dnajc5gQ8C632 165 aa25.55■■□□□ 1.68
Trim47-202ENSMUST00000106441 Znf710Q3U288 666 aa25.55■■□□□ 1.68
Trim47-202ENSMUST00000106441 Zmym4A2A791 1549 aaKnown RBP25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Plch2A2AP18 1501 aa25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Trpm1Q2TV84 1622 aa25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Fam71e1A1L3C1 212 aa25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Kif3bQ61771 747 aa25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Plppr3Q7TPB0 716 aa25.54■■□□□ 1.68
Trim47-202ENSMUST00000106441 Clstn2Q9ER65 966 aa25.52■■□□□ 1.68
Trim47-202ENSMUST00000106441 NpatQ8BMA5 1420 aa25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 Cfap65Q3V0B4 1847 aa25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 ShprhQ7TPQ3 1674 aa25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 Naip6Q9JIB6 1403 aa25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 Map4P27546 1125 aaKnown RBP25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 Topbp1Q6ZQF0 1515 aa25.51■■□□□ 1.67
Trim47-202ENSMUST00000106441 Naip5Q9R016 1403 aa25.5■■□□□ 1.67
Trim47-202ENSMUST00000106441 Kif1bQ60575 1816 aaKnown RBP25.49■■□□□ 1.67
Trim47-202ENSMUST00000106441 Mapk8ip2Q9ERE9 830 aa25.49■■□□□ 1.67
Trim47-202ENSMUST00000106441 Lamc1P02468 1607 aaKnown RBP25.48■■□□□ 1.67
Trim47-202ENSMUST00000106441 Myo5cE9Q1F5 1742 aa25.47■■□□□ 1.67
Trim47-202ENSMUST00000106441 Supt6hQ62383 1726 aaKnown RBP25.47■■□□□ 1.67
Trim47-202ENSMUST00000106441 Mphosph9A6H5Y1 991 aa25.46■■□□□ 1.67
Trim47-202ENSMUST00000106441 Uggt2E9Q4X2 1504 aa25.46■■□□□ 1.67
Trim47-202ENSMUST00000106441 Ttll5Q8CHB8 1328 aa25.46■■□□□ 1.67
Trim47-202ENSMUST00000106441 Kif21bQ9QXL1 1668 aa25.44■■□□□ 1.66
Trim47-202ENSMUST00000106441 Asxl1P59598 1514 aa25.44■■□□□ 1.66
Trim47-202ENSMUST00000106441 Pde4cQ3UEI1 686 aa25.43■■□□□ 1.66
Trim47-202ENSMUST00000106441 SafbD3YXK2 937 aaKnown RBP25.41■■□□□ 1.66
Trim47-202ENSMUST00000106441 Smg6P61406 1418 aaKnown RBP25.39■■□□□ 1.65
Trim47-202ENSMUST00000106441 Robo2Q7TPD3 1470 aa25.37■■□□□ 1.65
Trim47-202ENSMUST00000106441 DiexfQ8BTT6 772 aaKnown RBP25.37■■□□□ 1.65
Trim47-202ENSMUST00000106441 Anp32aO35381 247 aa25.36■■□□□ 1.65
Trim47-202ENSMUST00000106441 Trak1Q6PD31 939 aa25.36■■□□□ 1.65
Trim47-202ENSMUST00000106441 PtprgQ05909 1442 aa25.35■■□□□ 1.65
Trim47-202ENSMUST00000106441 Adamtsl3G3UXC7 1706 aa25.35■■□□□ 1.65
Trim47-202ENSMUST00000106441 Abca6Q8K441 1624 aa25.35■■□□□ 1.65
Trim47-202ENSMUST00000106441 Cd109Q8R422 1442 aa25.33■■□□□ 1.65
Trim47-202ENSMUST00000106441 Prex1Q69ZK0 1650 aa25.32■■□□□ 1.64
Trim47-202ENSMUST00000106441 Pkd2O35245 966 aa25.29■■□□□ 1.64
Trim47-202ENSMUST00000106441 Nsd2Q8BVE8 1365 aa25.29■■□□□ 1.64
Trim47-202ENSMUST00000106441 Myom3A2ABU4 1439 aa25.29■■□□□ 1.64
Trim47-202ENSMUST00000106441 Alpk3Q924C5 1678 aa25.28■■□□□ 1.64
Trim47-202ENSMUST00000106441 Rtl5Q5DTT4 599 aa25.27■■□□□ 1.64
Trim47-202ENSMUST00000106441 Ylpm1Q9R0I7 1386 aaKnown RBP25.26■■□□□ 1.63
Trim47-202ENSMUST00000106441 Afap1Q80YS6 731 aa25.26■■□□□ 1.63
Trim47-202ENSMUST00000106441 Tmem131lQ3U3D7 1597 aa25.24■■□□□ 1.63
Trim47-202ENSMUST00000106441 Dhx9O70133 1380 aaKnown RBP25.23■■□□□ 1.63
Trim47-202ENSMUST00000106441 Bcl11aQ9QYE3 773 aa25.22■■□□□ 1.63
Trim47-202ENSMUST00000106441 CltcQ68FD5 1675 aaKnown RBP25.22■■□□□ 1.63
Trim47-202ENSMUST00000106441 Rsph4aQ8BYM7 716 aa25.21■■□□□ 1.63
Trim47-202ENSMUST00000106441 Atp7aQ64430 1491 aa25.21■■□□□ 1.63
Trim47-202ENSMUST00000106441 Sin3aQ60520 1274 aaKnown RBP25.21■■□□□ 1.63
Trim47-202ENSMUST00000106441 AnkarA2RT91 1465 aa25.2■■□□□ 1.63
Trim47-202ENSMUST00000106441 Safb2Q80YR5 991 aaKnown RBP25.19■■□□□ 1.62
Trim47-202ENSMUST00000106441 Ttc21bQ0HA38 1315 aa25.19■■□□□ 1.62
Trim47-202ENSMUST00000106441 Adamts7Q68SA9 1657 aa25.18■■□□□ 1.62
Trim47-202ENSMUST00000106441 Calr4Q3TQS0 420 aa25.17■■□□□ 1.62
Trim47-202ENSMUST00000106441 RictorQ6QI06 1708 aa25.16■■□□□ 1.62
Trim47-202ENSMUST00000106441 Talpid3E9PV87 1520 aa25.14■■□□□ 1.62
Trim47-202ENSMUST00000106441 Rprd2Q6NXI6 1469 aaKnown RBP25.13■■□□□ 1.61
Trim47-202ENSMUST00000106441 Ncoa1P70365 1447 aa25.13■■□□□ 1.61
Trim47-202ENSMUST00000106441 Pik3c2gO70167 1506 aa25.13■■□□□ 1.61
Trim47-202ENSMUST00000106441 Myom2Q14BI5 1463 aa25.11■■□□□ 1.61
Trim47-202ENSMUST00000106441 Usp47Q8BY87 1376 aa25.11■■□□□ 1.61
Trim47-202ENSMUST00000106441 MlecQ6ZQI3 291 aaKnown RBP25.11■■□□□ 1.61
Trim47-202ENSMUST00000106441 Akap12Q9WTQ5 1684 aa25.1■■□□□ 1.61
Trim47-202ENSMUST00000106441 Arhgap23Q69ZH9 1483 aa25.09■■□□□ 1.61
Trim47-202ENSMUST00000106441 Erich6D3Z6S9 713 aa25.09■■□□□ 1.61
Trim47-202ENSMUST00000106441 Dot1lQ6XZL8 1540 aa25.09■■□□□ 1.61
Trim47-202ENSMUST00000106441 Iqgap3F8VQ29 1632 aa25.09■■□□□ 1.61
Trim47-202ENSMUST00000106441 Hfm1D3Z4R1 1434 aa25.08■■□□□ 1.6
Trim47-202ENSMUST00000106441 Tarbp1E9Q368 1579 aa25.07■■□□□ 1.6
Trim47-202ENSMUST00000106441 DroshaQ5HZJ0 1373 aaKnown RBP25.06■■□□□ 1.6
Trim47-202ENSMUST00000106441 Knl1Q66JQ7 1612 aa25.06■■□□□ 1.6
Trim47-202ENSMUST00000106441 Edc4Q3UJB9 1406 aaKnown RBP25.06■■□□□ 1.6
Trim47-202ENSMUST00000106441 Hdac5Q9Z2V6 1113 aa25.04■■□□□ 1.6
Trim47-202ENSMUST00000106441 Ino80Q6ZPV2 1559 aa25.04■■□□□ 1.6
Trim47-202ENSMUST00000106441 Prdm2A2A7B5 1709 aaKnown RBP25.04■■□□□ 1.6
Trim47-202ENSMUST00000106441 Gm13695A2AK44 830 aa25.02■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms